Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 YBR184WYBR184W 1572 nt2.78□□□□□ -1.96
NPL3Q01560 YGR250CYGR250C 2346 nt2.78□□□□□ -1.96
NPL3Q01560 YMR321CYMR321C 318 nt2.78□□□□□ -1.96 RIP-Chip
NPL3Q01560 HHT1YBR010W 411 nt2.78□□□□□ -1.96
NPL3Q01560 YPR063CYPR063C 423 nt2.78□□□□□ -1.96 RIP-Chip
NPL3Q01560 YBR224WYBR224W 516 nt2.78□□□□□ -1.96
NPL3Q01560 CBF2YGR140W 2871 nt2.78□□□□□ -1.97
NPL3Q01560 PEX8YGR077C 1770 nt2.77□□□□□ -1.97
NPL3Q01560 MRP10YDL045W-A 288 nt2.77□□□□□ -1.97 RIP-Chip
NPL3Q01560 SNC1YAL030W 354 nt2.77□□□□□ -1.97 RIP-Chip
NPL3Q01560 YNL028WYNL028W 318 nt2.77□□□□□ -1.97
NPL3Q01560 SEF1YBL066C 3447 nt2.77□□□□□ -1.97
NPL3Q01560 RAX2YLR084C 3663 nt2.77□□□□□ -1.97
NPL3Q01560 CDC27YBL084C 2277 nt2.77□□□□□ -1.97
NPL3Q01560 YLR149CYLR149C 2193 nt2.77□□□□□ -1.97
NPL3Q01560 ECM29YHL030W 5607 nt2.76□□□□□ -1.97
NPL3Q01560 PEP3YLR148W 2757 nt2.76□□□□□ -1.97
NPL3Q01560 YHR086W-AYHR086W-A 162 nt2.76□□□□□ -1.97
NPL3Q01560 NPC2YDL046W 522 nt2.75□□□□□ -1.97 RIP-Chip
NPL3Q01560 PCC1YKR095W-A 267 nt2.75□□□□□ -1.97 RIP-Chip
NPL3Q01560 EMC6YLL014W 327 nt2.75□□□□□ -1.97
NPL3Q01560 RPL38YLR325C 237 nt2.75□□□□□ -1.97 RIP-Chip
NPL3Q01560 GEA1YJR031C 4227 nt2.75□□□□□ -1.97
NPL3Q01560 PHO2YDL106C 1680 nt2.75□□□□□ -1.97
NPL3Q01560 VPH1YOR270C 2523 nt2.75□□□□□ -1.97
NPL3Q01560 ESL1YIL151C 3357 nt2.75□□□□□ -1.97
NPL3Q01560 MMS22YLR320W 4365 nt2.74□□□□□ -1.97
NPL3Q01560 SCH9YHR205W 2475 nt2.74□□□□□ -1.97
NPL3Q01560 CSE2YNR010W 450 nt2.74□□□□□ -1.97 RIP-Chip
NPL3Q01560 YNL018CYNL018C 1839 nt2.74□□□□□ -1.97
NPL3Q01560 HDA3YPR179C 1968 nt2.74□□□□□ -1.97
NPL3Q01560 AI5_ALPHAQ0070 1893 nt2.73□□□□□ -1.97
NPL3Q01560 SPO22YIL073C 2928 nt2.73□□□□□ -1.97
NPL3Q01560 ESL2YKR096W 3588 nt2.73□□□□□ -1.97
NPL3Q01560 VTC1YER072W 390 nt2.73□□□□□ -1.97 RIP-Chip
NPL3Q01560 ESC1YMR219W 4977 nt2.73□□□□□ -1.97
NPL3Q01560 MNL2YLR057W 2550 nt2.73□□□□□ -1.97
NPL3Q01560 DNA2YHR164C 4569 nt2.73□□□□□ -1.97
NPL3Q01560 CDC53YDL132W 2448 nt2.72□□□□□ -1.97
NPL3Q01560 LRE1YCL051W 1752 nt2.72□□□□□ -1.97
NPL3Q01560 snR70snR70 164 nt2.72□□□□□ -1.97
NPL3Q01560 YLR120W-AYLR120W-A 102 nt2.72□□□□□ -1.97
NPL3Q01560 YOR015WYOR015W 360 nt2.72□□□□□ -1.97
NPL3Q01560 BCK1YJL095W 4437 nt2.72□□□□□ -1.97
NPL3Q01560 YIL080WYIL080W 4722 nt2.71□□□□□ -1.98
NPL3Q01560 YGL217CYGL217C 342 nt2.71□□□□□ -1.98
NPL3Q01560 snR52snR52 92 nt2.71□□□□□ -1.98
NPL3Q01560 EFR3YMR212C 2349 nt2.71□□□□□ -1.98
NPL3Q01560 BUB1YGR188C 3066 nt2.71□□□□□ -1.98
NPL3Q01560 YBL005W-BYBL005W-B 5268 nt2.71□□□□□ -1.98
NPL3Q01560 MRD1YPR112C 2664 nt2.7□□□□□ -1.98
NPL3Q01560 RRT15YLR162W-A 189 nt2.7□□□□□ -1.98
NPL3Q01560 YML007C-AYML007C-A 111 nt2.7□□□□□ -1.98
NPL3Q01560 NUT2YPR168W 474 nt2.7□□□□□ -1.98 RIP-Chip
NPL3Q01560 SMY2YBR172C 2223 nt2.7□□□□□ -1.98
NPL3Q01560 STB4YMR019W 2850 nt2.69□□□□□ -1.98
NPL3Q01560 VPS34YLR240W 2628 nt2.69□□□□□ -1.98
NPL3Q01560 YBL109WYBL109W 336 nt2.69□□□□□ -1.98
NPL3Q01560 YOR333CYOR333C 417 nt2.69□□□□□ -1.98
NPL3Q01560 SWA2YDR320C 2007 nt2.69□□□□□ -1.98
NPL3Q01560 SWR1YDR334W 4545 nt2.69□□□□□ -1.98
NPL3Q01560 GRR1YJR090C 3456 nt2.69□□□□□ -1.98
NPL3Q01560 YDR426CYDR426C 378 nt2.68□□□□□ -1.98
NPL3Q01560 YLR146W-AYLR146W-A 189 nt2.68□□□□□ -1.98
NPL3Q01560 UPS1YLR193C 528 nt2.68□□□□□ -1.98 RIP-Chip
NPL3Q01560 SAP1YER047C 2694 nt2.68□□□□□ -1.98
NPL3Q01560 YPL150WYPL150W 2706 nt2.68□□□□□ -1.98
NPL3Q01560 KEL2YGR238C 2649 nt2.68□□□□□ -1.98
NPL3Q01560 CSF1YLR087C 8877 nt2.67□□□□□ -1.98
NPL3Q01560 PDE2YOR360C 1581 nt2.67□□□□□ -1.98 RIP-Chip
NPL3Q01560 MGM1YOR211C 2646 nt2.67□□□□□ -1.98
NPL3Q01560 COS111YBR203W 2775 nt2.66□□□□□ -1.98
NPL3Q01560 RPL34BYIL052C 366 nt2.66□□□□□ -1.98 RIP-Chip
NPL3Q01560 YPR203WYPR203W 309 nt2.66□□□□□ -1.98
NPL3Q01560 CUL3YGR003W 2235 nt2.66□□□□□ -1.98
NPL3Q01560 SET2YJL168C 2202 nt2.66□□□□□ -1.98
NPL3Q01560 ORC2YBR060C 1863 nt2.66□□□□□ -1.98
NPL3Q01560 TRS130YMR218C 3309 nt2.66□□□□□ -1.98
NPL3Q01560 NUM1YDR150W 8247 nt2.66□□□□□ -1.98
NPL3Q01560 LCD1YDR499W 2244 nt2.65□□□□□ -1.98
NPL3Q01560 SEC5YDR166C 2916 nt2.65□□□□□ -1.99
NPL3Q01560 RPL42BYHR141C 321 nt2.65□□□□□ -1.99
NPL3Q01560 RPS29AYLR388W 171 nt2.65□□□□□ -1.99 RIP-Chip
NPL3Q01560 RPL42AYNL162W 321 nt2.65□□□□□ -1.99
NPL3Q01560 YBR182C-AYBR182C-A 195 nt2.65□□□□□ -1.99
NPL3Q01560 ZRG8YER033C 3231 nt2.65□□□□□ -1.99
NPL3Q01560 VMR1YHL035C 4779 nt2.65□□□□□ -1.99
NPL3Q01560 RPO41YFL036W 4056 nt2.65□□□□□ -1.99
NPL3Q01560 NOP53YPL146C 1368 nt2.64□□□□□ -1.99
NPL3Q01560 SLM1YIL105C 2061 nt2.64□□□□□ -1.99
NPL3Q01560 SEC26YDR238C 2922 nt2.64□□□□□ -1.99
NPL3Q01560 SSS1YDR086C 243 nt2.64□□□□□ -1.99
NPL3Q01560 YNL114CYNL114C 372 nt2.64□□□□□ -1.99
NPL3Q01560 YOR376WYOR376W 369 nt2.64□□□□□ -1.99
NPL3Q01560 YOR381W-AYOR381W-A 168 nt2.64□□□□□ -1.99
NPL3Q01560 YBR131C-AYBR131C-A 90 nt2.64□□□□□ -1.99
NPL3Q01560 SWI6YLR182W 2412 nt2.64□□□□□ -1.99
NPL3Q01560 FAR11YNL127W 2862 nt2.64□□□□□ -1.99
NPL3Q01560 YDR098C-BYDR098C-B 5268 nt2.64□□□□□ -1.99
NPL3Q01560 YDR210C-DYDR210C-D 5268 nt2.64□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms