Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 CTK3YML112W 891 nt1.22□□□□□ -2.21
VPS3P23643 HHT1YBR010W 411 nt1.22□□□□□ -2.21
VPS3P23643 YCL046WYCL046W 324 nt1.22□□□□□ -2.21
VPS3P23643 NUP145YGL092W 3954 nt1.22□□□□□ -2.21
VPS3P23643 MVP1YMR004W 1536 nt1.21□□□□□ -2.22
VPS3P23643 RPL42BYHR141C 321 nt1.21□□□□□ -2.22
VPS3P23643 RPL42AYNL162W 321 nt1.21□□□□□ -2.22
VPS3P23643 MDS3YGL197W 4464 nt1.2□□□□□ -2.22
VPS3P23643 YGR265WYGR265W 411 nt1.2□□□□□ -2.22
VPS3P23643 YGR283CYGR283C 1026 nt1.2□□□□□ -2.22
VPS3P23643 EMC5YIL027C 426 nt1.2□□□□□ -2.22
VPS3P23643 YPR063CYPR063C 423 nt1.2□□□□□ -2.22
VPS3P23643 YSY6YBR162W-A 198 nt1.2□□□□□ -2.22
VPS3P23643 COG4YPR105C 2586 nt1.2□□□□□ -2.22
VPS3P23643 UFD2YDL190C 2886 nt1.19□□□□□ -2.22
VPS3P23643 YDL152WYDL152W 366 nt1.19□□□□□ -2.22
VPS3P23643 QCR7YDR529C 384 nt1.19□□□□□ -2.22
VPS3P23643 PAU18YLL064C 363 nt1.19□□□□□ -2.22
VPS3P23643 GMC2YLR445W 567 nt1.19□□□□□ -2.22
VPS3P23643 YBL073WYBL073W 312 nt1.19□□□□□ -2.22
VPS3P23643 PAU6YNR076W 363 nt1.19□□□□□ -2.22
VPS3P23643 FMP23YBR047W 528 nt1.19□□□□□ -2.22
VPS3P23643 SLM6YBR266C 453 nt1.19□□□□□ -2.22
VPS3P23643 APL1YJR005W 2103 nt1.19□□□□□ -2.22
VPS3P23643 SMC4YLR086W 4257 nt1.19□□□□□ -2.22
VPS3P23643 YDL016CYDL016C 303 nt1.18□□□□□ -2.22
VPS3P23643 PRM8YGL053W 714 nt1.18□□□□□ -2.22
VPS3P23643 YKL044WYKL044W 321 nt1.18□□□□□ -2.22
VPS3P23643 HCH1YNL281W 462 nt1.18□□□□□ -2.22
VPS3P23643 GAL7YBR018C 1101 nt1.18□□□□□ -2.22
VPS3P23643 MUK1YPL070W 1839 nt1.17□□□□□ -2.22
VPS3P23643 CLU1YMR012W 3834 nt1.17□□□□□ -2.22
VPS3P23643 HNT1YDL125C 477 nt1.17□□□□□ -2.22
VPS3P23643 OCA6YDR067C 675 nt1.17□□□□□ -2.22
VPS3P23643 YJR141WYJR141W 1044 nt1.17□□□□□ -2.22
VPS3P23643 BER1YLR412W 825 nt1.17□□□□□ -2.22
VPS3P23643 RPS18BYML026C 441 nt1.17□□□□□ -2.22
VPS3P23643 DDR48YMR173W 1293 nt1.17□□□□□ -2.22
VPS3P23643 IRC16YPR038W 360 nt1.17□□□□□ -2.22
VPS3P23643 YPR146CYPR146C 330 nt1.17□□□□□ -2.22
VPS3P23643 YBR121C-AYBR121C-A 159 nt1.17□□□□□ -2.22
VPS3P23643 SPT7YBR081C 3999 nt1.16□□□□□ -2.22
VPS3P23643 RPL40BYKR094C 387 nt1.16□□□□□ -2.22
VPS3P23643 NOP15YNL110C 663 nt1.16□□□□□ -2.22
VPS3P23643 YOR376WYOR376W 369 nt1.16□□□□□ -2.22
VPS3P23643 YHR028W-AYHR028W-A 321 nt1.15□□□□□ -2.23
VPS3P23643 YOR029WYOR029W 336 nt1.15□□□□□ -2.23
VPS3P23643 PAC1YOR269W 1485 nt1.15□□□□□ -2.23
VPS3P23643 MSS11YMR164C 2277 nt1.15□□□□□ -2.23
VPS3P23643 PPN1YDR452W 2025 nt1.15□□□□□ -2.23
VPS3P23643 ZRG17YNR039C 1818 nt1.15□□□□□ -2.23
VPS3P23643 NUP188YML103C 4968 nt1.15□□□□□ -2.23
VPS3P23643 YCS4YLR272C 3531 nt1.14□□□□□ -2.23
VPS3P23643 HDA3YPR179C 1968 nt1.14□□□□□ -2.23
VPS3P23643 YKL068W-AYKL068W-A 237 nt1.14□□□□□ -2.23
VPS3P23643 YNL114CYNL114C 372 nt1.14□□□□□ -2.23
VPS3P23643 YOR248WYOR248W 303 nt1.14□□□□□ -2.23
VPS3P23643 YPR099CYPR099C 357 nt1.14□□□□□ -2.23
VPS3P23643 BUD3YCL014W 4911 nt1.14□□□□□ -2.23
VPS3P23643 ROM2YLR371W 4071 nt1.13□□□□□ -2.23
VPS3P23643 VAM6YDL077C 3150 nt1.13□□□□□ -2.23
VPS3P23643 YHL009W-AYHL009W-A 1242 nt1.13□□□□□ -2.23
VPS3P23643 YDL211CYDL211C 1119 nt1.12□□□□□ -2.23
VPS3P23643 YGL217CYGL217C 342 nt1.12□□□□□ -2.23
VPS3P23643 RPL34BYIL052C 366 nt1.12□□□□□ -2.23
VPS3P23643 YKL123WYKL123W 381 nt1.12□□□□□ -2.23
VPS3P23643 YPR039WYPR039W 336 nt1.12□□□□□ -2.23
VPS3P23643 SEC3YER008C 4011 nt1.12□□□□□ -2.23
VPS3P23643 YDR509WYDR509W 348 nt1.11□□□□□ -2.23
VPS3P23643 UBX4YMR067C 1251 nt1.11□□□□□ -2.23
VPS3P23643 YOR161W-BYOR161W-B 261 nt1.11□□□□□ -2.23
VPS3P23643 TIM18YOR297C 579 nt1.11□□□□□ -2.23
VPS3P23643 SVS1YPL163C 783 nt1.11□□□□□ -2.23
VPS3P23643 PAN3YKL025C 2040 nt1.11□□□□□ -2.23
VPS3P23643 EMT1tM(CAU)D 73 nt1.1□□□□□ -2.23
VPS3P23643 EMT5tM(CAU)J1 73 nt1.1□□□□□ -2.23
VPS3P23643 EMT3tM(CAU)J2 73 nt1.1□□□□□ -2.23
VPS3P23643 EMT4tM(CAU)M 73 nt1.1□□□□□ -2.23
VPS3P23643 EMT2tM(CAU)O2 73 nt1.1□□□□□ -2.23
VPS3P23643 RAD50YNL250W 3939 nt1.1□□□□□ -2.23
VPS3P23643 YOR192C-AYOR192C-A 1317 nt1.1□□□□□ -2.23
VPS3P23643 SPR3YGR059W 1539 nt1.1□□□□□ -2.23
VPS3P23643 YDR029WYDR029W 315 nt1.09□□□□□ -2.23
VPS3P23643 PAU2YEL049W 363 nt1.09□□□□□ -2.23
VPS3P23643 ILM1YJR118C 612 nt1.09□□□□□ -2.23
VPS3P23643 YBR032WYBR032W 303 nt1.09□□□□□ -2.23
VPS3P23643 SNU56YDR240C 1479 nt1.09□□□□□ -2.24
VPS3P23643 SWI5YDR146C 2130 nt1.09□□□□□ -2.24
VPS3P23643 SEC5YDR166C 2916 nt1.08□□□□□ -2.24
VPS3P23643 YDR003W-AYDR003W-A 123 nt1.08□□□□□ -2.24
VPS3P23643 YDR008CYDR008C 351 nt1.08□□□□□ -2.24
VPS3P23643 TMA22YJR014W 597 nt1.08□□□□□ -2.24
VPS3P23643 YLL020CYLL020C 306 nt1.08□□□□□ -2.24
VPS3P23643 YOP1YPR028W 543 nt1.08□□□□□ -2.24
VPS3P23643 SLX4YLR135W 2247 nt1.08□□□□□ -2.24
VPS3P23643 PAM16YJL104W 450 nt1.07□□□□□ -2.24
VPS3P23643 YBR071WYBR071W 636 nt1.07□□□□□ -2.24
VPS3P23643 YAR009CYAR009C 3591 nt1.07□□□□□ -2.24
VPS3P23643 SRP14YDL092W 441 nt1.06□□□□□ -2.24
VPS3P23643 MET32YDR253C 576 nt1.06□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 50.4 ms