RNA–Protein interactions for RNA: YHR028W-A

YHR028W-A, Transcript of Dubious open reading frame, yeastyeast

Gene YHR028W-A, Length 321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHR028W-AYHR028W-A MTC1P47018 478 aaKnown RBP19.08■□□□□ 0.64
YHR028W-AYHR028W-A FAP1P53971 965 aa18.08■□□□□ 0.48
YHR028W-AYHR028W-A DRS1P32892 752 aaKnown RBP17.04■□□□□ 0.32
YHR028W-AYHR028W-A PRY3P47033 881 aa17.02■□□□□ 0.32
YHR028W-AYHR028W-A PRI1P10363 409 aa16.54■□□□□ 0.24
YHR028W-AYHR028W-A AAD16Q02895 342 aa16.53■□□□□ 0.24
YHR028W-AYHR028W-A YCK3P39962 524 aa16.03■□□□□ 0.16
YHR028W-AYHR028W-A ISW2Q08773 1120 aa16■□□□□ 0.15
YHR028W-AYHR028W-A HAA1Q12753 694 aaKnown RBP15.92■□□□□ 0.14
YHR028W-AYHR028W-A RPG1P38249 964 aaKnown RBP15.85■□□□□ 0.13
YHR028W-AYHR028W-A TSR3Q12094 313 aaKnown RBP15.59■□□□□ 0.09
YHR028W-AYHR028W-A DIP2Q12220 943 aaPredicted RBP15.23■□□□□ 0.03
YHR028W-AYHR028W-A MRPL32P25348 183 aa14.98□□□□□ -0.01
YHR028W-AYHR028W-A RSE1Q04693 1361 aaKnown RBP14.94□□□□□ -0.02
YHR028W-AYHR028W-A YGL015CP33199 130 aa14.58□□□□□ -0.08
YHR028W-AYHR028W-A REB1P21538 810 aa14.53□□□□□ -0.08
YHR028W-AYHR028W-A RPL17AP05740 184 aaKnown RBP14.51□□□□□ -0.09
YHR028W-AYHR028W-A RPL17BP46990 184 aaKnown RBP14.51□□□□□ -0.09
YHR028W-AYHR028W-A AVT3P36062 692 aa14.45□□□□□ -0.1
YHR028W-AYHR028W-A CDC27P38042 758 aa14.1□□□□□ -0.15
YHR028W-AYHR028W-A YKR023WP36119 530 aaKnown RBP13.86□□□□□ -0.19
YHR028W-AYHR028W-A SPT21P35209 758 aa13.84□□□□□ -0.19
YHR028W-AYHR028W-A UBP10P53874 792 aaPredicted RBP13.8□□□□□ -0.2
YHR028W-AYHR028W-A BFR2Q06631 534 aaKnown RBP13.78□□□□□ -0.2
YHR028W-AYHR028W-A MAP2P38174 421 aaKnown RBP13.74□□□□□ -0.21
YHR028W-AYHR028W-A BUD31P25337 157 aaPredicted RBP13.72□□□□□ -0.21
YHR028W-AYHR028W-A HOP09932 586 aa13.58□□□□□ -0.24
YHR028W-AYHR028W-A TFC8Q12308 588 aa13.58□□□□□ -0.24
YHR028W-AYHR028W-A DCD1P06773 312 aa13.55□□□□□ -0.24
YHR028W-AYHR028W-A SCY1P53009 804 aa13.34□□□□□ -0.27
YHR028W-AYHR028W-A TIF4632P39936 914 aaKnown RBP13.24□□□□□ -0.29
YHR028W-AYHR028W-A SLX5P32828 619 aaKnown RBP13.2□□□□□ -0.3
YHR028W-AYHR028W-A TGL3P40308 642 aa13.19□□□□□ -0.3
YHR028W-AYHR028W-A RIM101P33400 625 aa13.16□□□□□ -0.3
YHR028W-AYHR028W-A BCH2P36122 765 aa13.1□□□□□ -0.31
YHR028W-AYHR028W-A UBP9P39967 754 aa13.03□□□□□ -0.32
YHR028W-AYHR028W-A SIS1P25294 352 aaKnown RBP12.99□□□□□ -0.33
YHR028W-AYHR028W-A EPS1P40557 701 aa12.73□□□□□ -0.37
YHR028W-AYHR028W-A OXP1P28273 1286 aa12.7□□□□□ -0.38
YHR028W-AYHR028W-A BDF1P35817 686 aa12.69□□□□□ -0.38
YHR028W-AYHR028W-A PTP3P40048 928 aa12.56□□□□□ -0.4
YHR028W-AYHR028W-A MST1P07236 462 aa12.54□□□□□ -0.4
YHR028W-AYHR028W-A YIL055CP40523 627 aaKnown RBP12.52□□□□□ -0.41
YHR028W-AYHR028W-A YBL029C-AQ3E756 94 aa12.48□□□□□ -0.41
YHR028W-AYHR028W-A YOR238WQ08634 303 aa12.47□□□□□ -0.41
YHR028W-AYHR028W-A NSR1P27476 414 aaKnown RBP RIP-Chip data12.38□□□□□ -0.43not detected
YHR028W-AYHR028W-A BBC1P47068 1157 aa12.36□□□□□ -0.43
YHR028W-AYHR028W-A RSM7P47150 247 aa12.34□□□□□ -0.43
YHR028W-AYHR028W-A VNX1P42839 908 aa12.3□□□□□ -0.44
YHR028W-AYHR028W-A AI2P03876 854 aa12.29□□□□□ -0.44
YHR028W-AYHR028W-A YAP5P40574 245 aa12.28□□□□□ -0.44
YHR028W-AYHR028W-A YAH1Q12184 172 aaKnown RBP12.23□□□□□ -0.45
YHR028W-AYHR028W-A SPP1Q03012 353 aa12.2□□□□□ -0.46
YHR028W-AYHR028W-A WSC3Q12215 556 aa12.17□□□□□ -0.46
YHR028W-AYHR028W-A GTT3P39996 337 aa12.03□□□□□ -0.48
YHR028W-AYHR028W-A TIF11P38912 153 aaKnown RBP12.02□□□□□ -0.49
YHR028W-AYHR028W-A AIR2Q12476 344 aaKnown RBP12□□□□□ -0.49
YHR028W-AYHR028W-A YLR271WQ06152 274 aa11.99□□□□□ -0.49
YHR028W-AYHR028W-A FKH1P40466 484 aa11.97□□□□□ -0.49
YHR028W-AYHR028W-A YJL171CP46992 396 aa11.93□□□□□ -0.5
YHR028W-AYHR028W-A PSD2P53037 1138 aaKnown RBP11.91□□□□□ -0.5
YHR028W-AYHR028W-A PIB1Q06651 286 aa11.88□□□□□ -0.51
YHR028W-AYHR028W-A TFA1P36100 482 aa11.86□□□□□ -0.51
YHR028W-AYHR028W-A LDB19Q12502 818 aa11.85□□□□□ -0.51
YHR028W-AYHR028W-A ULI1P43604 169 aa11.84□□□□□ -0.51
YHR028W-AYHR028W-A MRM1P25270 412 aa11.81□□□□□ -0.52
YHR028W-AYHR028W-A IOC2Q12072 812 aa11.81□□□□□ -0.52
YHR028W-AYHR028W-A BMT6Q12291 365 aa11.73□□□□□ -0.53
YHR028W-AYHR028W-A MSB4Q12317 492 aa11.72□□□□□ -0.53
YHR028W-AYHR028W-A EAP1P36041 632 aaKnown RBP11.66□□□□□ -0.54
YHR028W-AYHR028W-A ARP8Q12386 881 aaKnown RBP RIP-Chip data11.65□□□□□ -0.54not detected
YHR028W-AYHR028W-A SSP1P38871 571 aa11.62□□□□□ -0.55
YHR028W-AYHR028W-A YOL036WQ08206 761 aa11.62□□□□□ -0.55
YHR028W-AYHR028W-A SET4P42948 560 aa11.6□□□□□ -0.55
YHR028W-AYHR028W-A YMR1P47147 688 aaKnown RBP RIP-Chip data11.6□□□□□ -0.55not detected
YHR028W-AYHR028W-A RTG1P32607 177 aa11.58□□□□□ -0.56
YHR028W-AYHR028W-A TRP5P00931 707 aaKnown RBP11.57□□□□□ -0.56
YHR028W-AYHR028W-A DBP1P24784 617 aaKnown RBP11.56□□□□□ -0.56
YHR028W-AYHR028W-A VPS29P38759 282 aa11.55□□□□□ -0.56
YHR028W-AYHR028W-A CST9Q06032 482 aa11.53□□□□□ -0.56
YHR028W-AYHR028W-A YFR006WP43590 535 aa11.51□□□□□ -0.57
YHR028W-AYHR028W-A NCR1Q12200 1170 aa11.51□□□□□ -0.57
YHR028W-AYHR028W-A RTG3P38165 486 aa11.5□□□□□ -0.57
YHR028W-AYHR028W-A VMA1P17255 1071 aaKnown RBP11.49□□□□□ -0.57
YHR028W-AYHR028W-A STS1P38637 319 aa11.47□□□□□ -0.57
YHR028W-AYHR028W-A YNL035CP53962 389 aaKnown RBP11.47□□□□□ -0.57
YHR028W-AYHR028W-A SEC61P32915 480 aa11.45□□□□□ -0.58
YHR028W-AYHR028W-A MGA2P40578 1113 aa11.45□□□□□ -0.58
YHR028W-AYHR028W-A SAM3Q08986 587 aa11.43□□□□□ -0.58
YHR028W-AYHR028W-A RCR1P38212 213 aa11.34□□□□□ -0.59
YHR028W-AYHR028W-A TFG1P41895 735 aaPredicted RBP11.32□□□□□ -0.6
YHR028W-AYHR028W-A DAN4P47179 1161 aa11.28□□□□□ -0.6
YHR028W-AYHR028W-A ABP1P15891 592 aaKnown RBP11.26□□□□□ -0.61
YHR028W-AYHR028W-A JIP4Q03361 876 aa11.26□□□□□ -0.61
YHR028W-AYHR028W-A SAP30P38429 201 aa11.25□□□□□ -0.61
YHR028W-AYHR028W-A GYP5Q12344 894 aa11.24□□□□□ -0.61
YHR028W-AYHR028W-A YDL129WQ07555 291 aa11.19□□□□□ -0.62
YHR028W-AYHR028W-A HTA1P04911 132 aaKnown RBP11.18□□□□□ -0.62
YHR028W-AYHR028W-A HTA2P04912 132 aa11.18□□□□□ -0.62
YHR028W-AYHR028W-A DCW1P36091 449 aa11.17□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms