Protein–RNA interactions for Protein: P20448

HCA4, ATP-dependent RNA helicase HCA4, yeastyeast

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCA4P20448 ACB1YGR037C 264 nt2.7□□□□□ -1.98
HCA4P20448 TIM13YGR181W 318 nt2.7□□□□□ -1.98
HCA4P20448 PRP39YML046W 1890 nt2.7□□□□□ -1.98
HCA4P20448 CBF2YGR140W 2871 nt2.7□□□□□ -1.98
HCA4P20448 PAU2YEL049W 363 nt2.69□□□□□ -1.98
HCA4P20448 YHL042WYHL042W 453 nt2.69□□□□□ -1.98
HCA4P20448 YJL135WYJL135W 318 nt2.69□□□□□ -1.98
HCA4P20448 SAR1YPL218W 573 nt2.69□□□□□ -1.98
HCA4P20448 TOR1YJR066W 7413 nt2.69□□□□□ -1.98
HCA4P20448 YDR239CYDR239C 2364 nt2.68□□□□□ -1.98
HCA4P20448 VPS35YJL154C 2835 nt2.68□□□□□ -1.98
HCA4P20448 tF(GAA)QtF(GAA)Q 75 nt2.68□□□□□ -1.98
HCA4P20448 YGR050CYGR050C 357 nt2.68□□□□□ -1.98
HCA4P20448 ISW1YBR245C 3390 nt2.68□□□□□ -1.98
HCA4P20448 SNU114YKL173W 3027 nt2.68□□□□□ -1.98
HCA4P20448 AMS1YGL156W 3252 nt2.67□□□□□ -1.98
HCA4P20448 YHL041WYHL041W 450 nt2.67□□□□□ -1.98
HCA4P20448 YMR194C-AYMR194C-A 225 nt2.67□□□□□ -1.98
HCA4P20448 YMR230W-AYMR230W-A 189 nt2.67□□□□□ -1.98
HCA4P20448 YEL043WYEL043W 2871 nt2.67□□□□□ -1.98
HCA4P20448 VPS13YLL040C 9435 nt2.67□□□□□ -1.98
HCA4P20448 VTC3YPL019C 2508 nt2.66□□□□□ -1.98
HCA4P20448 QCR7YDR529C 384 nt2.66□□□□□ -1.98
HCA4P20448 YGL052WYGL052W 306 nt2.66□□□□□ -1.98
HCA4P20448 SMD1YGR074W 441 nt2.66□□□□□ -1.98
HCA4P20448 YIL020C-AYIL020C-A 339 nt2.66□□□□□ -1.98
HCA4P20448 YLR342W-AYLR342W-A 174 nt2.66□□□□□ -1.98
HCA4P20448 YMR141W-AYMR141W-A 225 nt2.66□□□□□ -1.98
HCA4P20448 YBR277CYBR277C 402 nt2.66□□□□□ -1.98
HCA4P20448 YBT1YLL048C 4986 nt2.66□□□□□ -1.98
HCA4P20448 KAR3YPR141C 2190 nt2.66□□□□□ -1.98
HCA4P20448 HSC82YMR186W 2118 nt2.65□□□□□ -1.98
HCA4P20448 TOP2YNL088W 4287 nt2.65□□□□□ -1.98
HCA4P20448 snR85snR85 171 nt2.65□□□□□ -1.99
HCA4P20448 PHS1YJL097W 654 nt2.65□□□□□ -1.99
HCA4P20448 YOR015WYOR015W 360 nt2.65□□□□□ -1.99
HCA4P20448 ACM1YPL267W 630 nt2.65□□□□□ -1.99
HCA4P20448 YPR063CYPR063C 423 nt2.65□□□□□ -1.99
HCA4P20448 SMC6YLR383W 3345 nt2.65□□□□□ -1.99
HCA4P20448 SGS1YMR190C 4344 nt2.64□□□□□ -1.99
HCA4P20448 HOS4YIL112W 3252 nt2.64□□□□□ -1.99
HCA4P20448 DIS3YOL021C 3006 nt2.64□□□□□ -1.99
HCA4P20448 SVL3YPL032C 2478 nt2.64□□□□□ -1.99
HCA4P20448 SMY2YBR172C 2223 nt2.64□□□□□ -1.99
HCA4P20448 SPF1YEL031W 3648 nt2.64□□□□□ -1.99
HCA4P20448 RIM20YOR275C 1986 nt2.64□□□□□ -1.99
HCA4P20448 SCP160YJL080C 3669 nt2.64□□□□□ -1.99
HCA4P20448 LSO2YGR169C-A 279 nt2.64□□□□□ -1.99
HCA4P20448 YLR053CYLR053C 327 nt2.64□□□□□ -1.99
HCA4P20448 RTC6YPL183W-A 282 nt2.64□□□□□ -1.99
HCA4P20448 TRS130YMR218C 3309 nt2.64□□□□□ -1.99
HCA4P20448 YBL005W-BYBL005W-B 5268 nt2.63□□□□□ -1.99
HCA4P20448 YKU80YMR106C 1890 nt2.63□□□□□ -1.99
HCA4P20448 snR60snR60 104 nt2.63□□□□□ -1.99
HCA4P20448 NOP10YHR072W-A 177 nt2.63□□□□□ -1.99
HCA4P20448 UPS1YLR193C 528 nt2.63□□□□□ -1.99
HCA4P20448 CYB5YNL111C 363 nt2.63□□□□□ -1.99
HCA4P20448 HHT1YBR010W 411 nt2.63□□□□□ -1.99
HCA4P20448 SGM1YJR134C 2124 nt2.63□□□□□ -1.99
HCA4P20448 BFA1YJR053W 1725 nt2.62□□□□□ -1.99
HCA4P20448 HYP2YEL034W 474 nt2.62□□□□□ -1.99
HCA4P20448 YGL024WYGL024W 336 nt2.62□□□□□ -1.99
HCA4P20448 SGD1YLR336C 2700 nt2.62□□□□□ -1.99
HCA4P20448 AI5_ALPHAQ0070 1893 nt2.61□□□□□ -1.99
HCA4P20448 SIR3YLR442C 2937 nt2.61□□□□□ -1.99
HCA4P20448 YLR140WYLR140W 327 nt2.61□□□□□ -1.99
HCA4P20448 RPS29AYLR388W 171 nt2.61□□□□□ -1.99
HCA4P20448 SNC2YOR327C 348 nt2.61□□□□□ -1.99
HCA4P20448 VIK1YPL253C 1944 nt2.61□□□□□ -1.99
HCA4P20448 MLH1YMR167W 2310 nt2.6□□□□□ -1.99
HCA4P20448 CDC53YDL132W 2448 nt2.6□□□□□ -1.99
HCA4P20448 YGL069CYGL069C 465 nt2.6□□□□□ -1.99
HCA4P20448 YLR120W-AYLR120W-A 102 nt2.6□□□□□ -1.99
HCA4P20448 YMR321CYMR321C 318 nt2.6□□□□□ -1.99
HCA4P20448 KAP123YER110C 3342 nt2.6□□□□□ -1.99
HCA4P20448 YNL018CYNL018C 1839 nt2.6□□□□□ -1.99
HCA4P20448 FAR11YNL127W 2862 nt2.6□□□□□ -1.99
HCA4P20448 GIS1YDR096W 2685 nt2.6□□□□□ -1.99
HCA4P20448 SCD5YOR329C 2619 nt2.59□□□□□ -1.99
HCA4P20448 CSF1YLR087C 8877 nt2.59□□□□□ -1.99
HCA4P20448 APL5YPL195W 2799 nt2.59□□□□□ -1.99
HCA4P20448 ORC2YBR060C 1863 nt2.59□□□□□ -1.99
HCA4P20448 NPC2YDL046W 522 nt2.59□□□□□ -1.99
HCA4P20448 YIL059CYIL059C 366 nt2.59□□□□□ -1.99
HCA4P20448 YEF3YLR249W 3135 nt2.58□□□□□ -2
HCA4P20448 TAE2YPL009C 3117 nt2.58□□□□□ -2
HCA4P20448 SPO22YIL073C 2928 nt2.58□□□□□ -2
HCA4P20448 CLN3YAL040C 1743 nt2.58□□□□□ -2
HCA4P20448 HDA3YPR179C 1968 nt2.58□□□□□ -2
HCA4P20448 snR48snR48 113 nt2.57□□□□□ -2
HCA4P20448 PSD2YGR170W 3417 nt2.57□□□□□ -2
HCA4P20448 UBP15YMR304W 3693 nt2.57□□□□□ -2
HCA4P20448 RRP6YOR001W 2202 nt2.57□□□□□ -2
HCA4P20448 DNF1YER166W 4716 nt2.56□□□□□ -2
HCA4P20448 VPS55YJR044C 423 nt2.56□□□□□ -2
HCA4P20448 PCC1YKR095W-A 267 nt2.56□□□□□ -2
HCA4P20448 AFI1YOR129C 2682 nt2.56□□□□□ -2
HCA4P20448 TFC3YAL001C 3483 nt2.56□□□□□ -2
HCA4P20448 YGR250CYGR250C 2346 nt2.56□□□□□ -2
HCA4P20448 RRP12YPL012W 3687 nt2.55□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 52.6 ms