Protein–RNA interactions for Protein: P46678

BDP1, Transcription factor TFIIIB component B'', yeastyeast

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BDP1P46678 STE6YKL209C 3873 nt3.86□□□□□ -1.79
BDP1P46678 VBA4YDR119W 2307 nt3.86□□□□□ -1.79
BDP1P46678 RPS17BYDR447C 411 nt3.86□□□□□ -1.79
BDP1P46678 LSO2YGR169C-A 279 nt3.86□□□□□ -1.79
BDP1P46678 SMC2YFR031C 3513 nt3.86□□□□□ -1.79
BDP1P46678 RIX1YHR197W 2292 nt3.86□□□□□ -1.79
BDP1P46678 ARO1YDR127W 4767 nt3.86□□□□□ -1.79
BDP1P46678 MTR4YJL050W 3222 nt3.85□□□□□ -1.79
BDP1P46678 SMC3YJL074C 3693 nt3.85□□□□□ -1.79
BDP1P46678 FLO9YAL063C 3969 nt3.85□□□□□ -1.79
BDP1P46678 YHR080CYHR080C 4038 nt3.85□□□□□ -1.79
BDP1P46678 OST4YDL232W 111 nt3.85□□□□□ -1.79
BDP1P46678 STU1YBL034C 4542 nt3.84□□□□□ -1.79
BDP1P46678 RAM2YKL019W 951 nt3.84□□□□□ -1.79
BDP1P46678 YOR072W-BYOR072W-B 162 nt3.84□□□□□ -1.79
BDP1P46678 GIN4YDR507C 3429 nt3.84□□□□□ -1.8
BDP1P46678 NOP4YPL043W 2058 nt3.83□□□□□ -1.8
BDP1P46678 YEL025CYEL025C 3567 nt3.83□□□□□ -1.8
BDP1P46678 ATP7YKL016C 525 nt3.83□□□□□ -1.8
BDP1P46678 MSH2YOL090W 2895 nt3.82□□□□□ -1.8
BDP1P46678 YBL065WYBL065W 345 nt3.82□□□□□ -1.8
BDP1P46678 RSM19YNR037C 276 nt3.82□□□□□ -1.8
BDP1P46678 MIT1YEL007W 2001 nt3.82□□□□□ -1.8
BDP1P46678 PAN3YKL025C 2040 nt3.82□□□□□ -1.8
BDP1P46678 MYO5YMR109W 3660 nt3.81□□□□□ -1.8
BDP1P46678 EFR3YMR212C 2349 nt3.81□□□□□ -1.8
BDP1P46678 PAU10YDR542W 363 nt3.81□□□□□ -1.8
BDP1P46678 PAU11YGL261C 363 nt3.81□□□□□ -1.8
BDP1P46678 PAU4YLR461W 363 nt3.81□□□□□ -1.8
BDP1P46678 SIZ1YDR409W 2715 nt3.81□□□□□ -1.8
BDP1P46678 PTC5YOR090C 1719 nt3.81□□□□□ -1.8
BDP1P46678 ELG1YOR144C 2376 nt3.8□□□□□ -1.8
BDP1P46678 DUF1YOL087C 3351 nt3.8□□□□□ -1.8
BDP1P46678 SQS1YNL224C 2304 nt3.8□□□□□ -1.8
BDP1P46678 tC(GCA)BtC(GCA)B 72 nt3.8□□□□□ -1.8
BDP1P46678 tC(GCA)GtC(GCA)G 72 nt3.8□□□□□ -1.8
BDP1P46678 tC(GCA)P1tC(GCA)P1 72 nt3.8□□□□□ -1.8
BDP1P46678 tC(GCA)P2tC(GCA)P2 72 nt3.8□□□□□ -1.8
BDP1P46678 RPS21AYKR057W 264 nt3.8□□□□□ -1.8
BDP1P46678 RPL33AYPL143W 324 nt3.8□□□□□ -1.8
BDP1P46678 COS111YBR203W 2775 nt3.79□□□□□ -1.8
BDP1P46678 YBR206WYBR206W 324 nt3.79□□□□□ -1.8
BDP1P46678 MPT5YGL178W 2580 nt3.79□□□□□ -1.8
BDP1P46678 INP2YMR163C 2118 nt3.79□□□□□ -1.8
BDP1P46678 YMR317WYMR317W 3423 nt3.78□□□□□ -1.8
BDP1P46678 RRM3YHR031C 2172 nt3.78□□□□□ -1.8
BDP1P46678 VPS3YDR495C 3036 nt3.78□□□□□ -1.8
BDP1P46678 YOL019W-AYOL019W-A 153 nt3.78□□□□□ -1.8
BDP1P46678 HAL9YOL089C 3093 nt3.78□□□□□ -1.8
BDP1P46678 NCA2YPR155C 1851 nt3.77□□□□□ -1.81
BDP1P46678 YDL242WYDL242W 354 nt3.77□□□□□ -1.81
BDP1P46678 YFR012W-AYFR012W-A 87 nt3.77□□□□□ -1.81
BDP1P46678 BMS1YPL217C 3552 nt3.77□□□□□ -1.81
BDP1P46678 STT4YLR305C 5703 nt3.76□□□□□ -1.81
BDP1P46678 CMC4YMR194C-B 222 nt3.76□□□□□ -1.81
BDP1P46678 RPL25YOL127W 429 nt3.76□□□□□ -1.81
BDP1P46678 YDR239CYDR239C 2364 nt3.76□□□□□ -1.81
BDP1P46678 COG3YER157W 2406 nt3.75□□□□□ -1.81
BDP1P46678 MDV1YJL112W 2145 nt3.75□□□□□ -1.81
BDP1P46678 YAL064W-BYAL064W-B 381 nt3.75□□□□□ -1.81
BDP1P46678 NAB3YPL190C 2409 nt3.75□□□□□ -1.81
BDP1P46678 TAF2YCR042C 4224 nt3.74□□□□□ -1.81
BDP1P46678 NUP120YKL057C 3114 nt3.74□□□□□ -1.81
BDP1P46678 APC11YDL008W 498 nt3.74□□□□□ -1.81
BDP1P46678 tF(GAA)DtF(GAA)D 73 nt3.74□□□□□ -1.81
BDP1P46678 tF(GAA)NtF(GAA)N 73 nt3.74□□□□□ -1.81
BDP1P46678 YER039C-AYER039C-A 219 nt3.74□□□□□ -1.81
BDP1P46678 YGR050CYGR050C 357 nt3.74□□□□□ -1.81
BDP1P46678 tQ(UUG)BtQ(UUG)B 72 nt3.74□□□□□ -1.81
BDP1P46678 GRX8YLR364W 330 nt3.74□□□□□ -1.81
BDP1P46678 MET10YFR030W 3108 nt3.74□□□□□ -1.81
BDP1P46678 AHC1YOR023C 1701 nt3.73□□□□□ -1.81
BDP1P46678 GLC3YEL011W 2115 nt3.73□□□□□ -1.81
BDP1P46678 VPH1YOR270C 2523 nt3.73□□□□□ -1.81
BDP1P46678 YBR174CYBR174C 315 nt3.73□□□□□ -1.81
BDP1P46678 VMA9YCL005W-A 222 nt3.73□□□□□ -1.81
BDP1P46678 PUF4YGL014W 2667 nt3.73□□□□□ -1.81
BDP1P46678 FAS1YKL182W 6156 nt3.72□□□□□ -1.81
BDP1P46678 BCH1YMR237W 2175 nt3.72□□□□□ -1.81
BDP1P46678 STF2YGR008C 255 nt3.72□□□□□ -1.81
BDP1P46678 NTO1YPR031W 2247 nt3.72□□□□□ -1.81
BDP1P46678 GIS4YML006C 2325 nt3.71□□□□□ -1.82
BDP1P46678 SPO14YKR031C 5052 nt3.71□□□□□ -1.82
BDP1P46678 TIM11YDR322C-A 291 nt3.71□□□□□ -1.82
BDP1P46678 HYP2YEL034W 474 nt3.71□□□□□ -1.82
BDP1P46678 SOM1YEL059C-A 225 nt3.71□□□□□ -1.82
BDP1P46678 TFC1YBR123C 1950 nt3.71□□□□□ -1.82
BDP1P46678 YCG1YDR325W 3108 nt3.7□□□□□ -1.82
BDP1P46678 POL2YNL262W 6669 nt3.7□□□□□ -1.82
BDP1P46678 SGD1YLR336C 2700 nt3.7□□□□□ -1.82
BDP1P46678 YCL046WYCL046W 324 nt3.7□□□□□ -1.82
BDP1P46678 YDL196WYDL196W 330 nt3.69□□□□□ -1.82
BDP1P46678 tL(UAA)QtL(UAA)Q 85 nt3.69□□□□□ -1.82
BDP1P46678 RLI1YDR091C 1827 nt3.69□□□□□ -1.82
BDP1P46678 RCY1YJL204C 2523 nt3.69□□□□□ -1.82
BDP1P46678 EPL1YFL024C 2499 nt3.68□□□□□ -1.82
BDP1P46678 RTC6YPL183W-A 282 nt3.68□□□□□ -1.82
BDP1P46678 TIM12YBR091C 330 nt3.68□□□□□ -1.82
BDP1P46678 BNI4YNL233W 2679 nt3.67□□□□□ -1.82
BDP1P46678 YJL070CYJL070C 2667 nt3.67□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 74.4 ms