Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 TERF1P5-201ENST00000477545 1207 ntBASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 AL162430.1-201ENST00000480705 870 ntBASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
TRGV1A0A0A0MS02 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 AP005212.1-201ENST00000581547 1997 ntBASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.69□□□□□ -0.06
TRGV1A0A0A0MS02 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 GABARAPL3-202ENST00000624044 1851 ntBASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRGV1A0A0A0MS02 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 AC020907.5-201ENST00000624372 1936 ntBASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 AL591742.1-201ENST00000604433 565 ntBASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 FAM21FP-204ENST00000608637 956 ntBASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 AC013268.1-206ENST00000638368 961 ntBASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 AC112229.1-201ENST00000639295 961 ntBASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 AC092720.2-201ENST00000602388 1665 ntBASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRGV1A0A0A0MS02 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.66□□□□□ -0.06
TRGV1A0A0A0MS02 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV1A0A0A0MS02 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.66□□□□□ -0.06
TRGV1A0A0A0MS02 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRGV1A0A0A0MS02 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRGV1A0A0A0MS02 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV1A0A0A0MS02 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV1A0A0A0MS02 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.66□□□□□ -0.06
TRGV1A0A0A0MS02 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRGV1A0A0A0MS02 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.66□□□□□ -0.06
TRGV1A0A0A0MS02 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.66□□□□□ -0.06
TRGV1A0A0A0MS02 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRGV1A0A0A0MS02 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRGV1A0A0A0MS02 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms