Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 PUT3YKL015W 2940 nt1.95□□□□□ -2.1
RUP1Q12242 EMP24YGL200C 612 nt1.95□□□□□ -2.1
RUP1Q12242 BIG1YHR101C 1008 nt1.95□□□□□ -2.1
RUP1Q12242 LYS9YNR050C 1341 nt1.94□□□□□ -2.1
RUP1Q12242 KAR3YPR141C 2190 nt1.94□□□□□ -2.1
RUP1Q12242 MXR1YER042W 555 nt1.94□□□□□ -2.1
RUP1Q12242 HSK3YKL138C-A 210 nt1.94□□□□□ -2.1
RUP1Q12242 YLR053CYLR053C 327 nt1.94□□□□□ -2.1
RUP1Q12242 SNC2YOR327C 348 nt1.94□□□□□ -2.1
RUP1Q12242 SPC72YAL047C 1869 nt1.94□□□□□ -2.1
RUP1Q12242 BI2Q0110 1272 nt1.93□□□□□ -2.1
RUP1Q12242 YHR130CYHR130C 336 nt1.93□□□□□ -2.1
RUP1Q12242 YKR051WYKR051W 1257 nt1.93□□□□□ -2.1
RUP1Q12242 YML108WYML108W 318 nt1.93□□□□□ -2.1
RUP1Q12242 YPR039WYPR039W 336 nt1.93□□□□□ -2.1
RUP1Q12242 TUS1YLR425W 3924 nt1.93□□□□□ -2.1
RUP1Q12242 DIS3YOL021C 3006 nt1.93□□□□□ -2.1
RUP1Q12242 YBR012W-AYBR012W-A 1323 nt1.92□□□□□ -2.1
RUP1Q12242 YOR142W-AYOR142W-A 1323 nt1.92□□□□□ -2.1
RUP1Q12242 YPR158W-AYPR158W-A 1323 nt1.92□□□□□ -2.1
RUP1Q12242 TEN1YLR010C 483 nt1.92□□□□□ -2.1
RUP1Q12242 CDC33YOL139C 642 nt1.92□□□□□ -2.1
RUP1Q12242 YCL023CYCL023C 348 nt1.92□□□□□ -2.1
RUP1Q12242 ASM4YDL088C 1587 nt1.92□□□□□ -2.1
RUP1Q12242 IST2YBR086C 2841 nt1.92□□□□□ -2.1
RUP1Q12242 SSQ1YLR369W 1974 nt1.92□□□□□ -2.1
RUP1Q12242 GYP5YPL249C 2685 nt1.92□□□□□ -2.1
RUP1Q12242 SOK2YMR016C 2358 nt1.91□□□□□ -2.1
RUP1Q12242 YDR286CYDR286C 345 nt1.91□□□□□ -2.1
RUP1Q12242 YGL069CYGL069C 465 nt1.91□□□□□ -2.1
RUP1Q12242 YGR025WYGR025W 303 nt1.91□□□□□ -2.1
RUP1Q12242 YLR171WYLR171W 390 nt1.91□□□□□ -2.1
RUP1Q12242 snR41snR41 95 nt1.91□□□□□ -2.1
RUP1Q12242 YDR341CYDR341C 1824 nt1.91□□□□□ -2.1
RUP1Q12242 AGC1YPR021C 2709 nt1.9□□□□□ -2.1
RUP1Q12242 CDC24YAL041W 2565 nt1.9□□□□□ -2.11
RUP1Q12242 YOR093CYOR093C 4947 nt1.9□□□□□ -2.11
RUP1Q12242 VPS15YBR097W 4365 nt1.9□□□□□ -2.11
RUP1Q12242 YCR001WYCR001W 315 nt1.9□□□□□ -2.11
RUP1Q12242 YDL062WYDL062W 426 nt1.9□□□□□ -2.11
RUP1Q12242 RPL37BYDR500C 267 nt1.9□□□□□ -2.11
RUP1Q12242 YER068C-AYER068C-A 432 nt1.9□□□□□ -2.11
RUP1Q12242 HUR1YGL168W 333 nt1.9□□□□□ -2.11
RUP1Q12242 TSC3YBR058C-A 243 nt1.9□□□□□ -2.11
RUP1Q12242 CDC27YBL084C 2277 nt1.9□□□□□ -2.11
RUP1Q12242 CRM1YGR218W 3255 nt1.9□□□□□ -2.11
RUP1Q12242 YOR192C-AYOR192C-A 1317 nt1.9□□□□□ -2.11
RUP1Q12242 NOT5YPR072W 1683 nt1.9□□□□□ -2.11
RUP1Q12242 MYO2YOR326W 4725 nt1.89□□□□□ -2.11
RUP1Q12242 RTT101YJL047C 2529 nt1.89□□□□□ -2.11
RUP1Q12242 NEO1YIL048W 3456 nt1.89□□□□□ -2.11
RUP1Q12242 RVS161YCR009C 798 nt1.89□□□□□ -2.11
RUP1Q12242 DAD4YDR320C-A 219 nt1.89□□□□□ -2.11
RUP1Q12242 YER172C-AYER172C-A 381 nt1.89□□□□□ -2.11
RUP1Q12242 SYM1YLR251W 594 nt1.89□□□□□ -2.11
RUP1Q12242 snR13snR13 124 nt1.89□□□□□ -2.11
RUP1Q12242 YPR146CYPR146C 330 nt1.89□□□□□ -2.11
RUP1Q12242 SIR4YDR227W 4077 nt1.89□□□□□ -2.11
RUP1Q12242 RTT107YHR154W 3213 nt1.89□□□□□ -2.11
RUP1Q12242 CDC60YPL160W 3273 nt1.88□□□□□ -2.11
RUP1Q12242 COX1Q0045 1605 nt1.88□□□□□ -2.11
RUP1Q12242 HMLALPHA2YCL067C 633 nt1.88□□□□□ -2.11
RUP1Q12242 MATALPHA2YCR039C 633 nt1.88□□□□□ -2.11
RUP1Q12242 YER135CYER135C 393 nt1.88□□□□□ -2.11
RUP1Q12242 YML084WYML084W 309 nt1.88□□□□□ -2.11
RUP1Q12242 YBR224WYBR224W 516 nt1.88□□□□□ -2.11
RUP1Q12242 MYO4YAL029C 4416 nt1.88□□□□□ -2.11
RUP1Q12242 SYH1YPL105C 2550 nt1.87□□□□□ -2.11
RUP1Q12242 YER121WYER121W 345 nt1.87□□□□□ -2.11
RUP1Q12242 YHR214W-AYHR214W-A 486 nt1.87□□□□□ -2.11
RUP1Q12242 YAR068WYAR068W 486 nt1.87□□□□□ -2.11
RUP1Q12242 YBR076C-AYBR076C-A 267 nt1.87□□□□□ -2.11
RUP1Q12242 RIC1YLR039C 3171 nt1.87□□□□□ -2.11
RUP1Q12242 SGD1YLR336C 2700 nt1.87□□□□□ -2.11
RUP1Q12242 SEC31YDL195W 3822 nt1.87□□□□□ -2.11
RUP1Q12242 NUP120YKL057C 3114 nt1.86□□□□□ -2.11
RUP1Q12242 LRE1YCL051W 1752 nt1.86□□□□□ -2.11
RUP1Q12242 YOR032W-AYOR032W-A 201 nt1.86□□□□□ -2.11
RUP1Q12242 YBR121C-AYBR121C-A 159 nt1.86□□□□□ -2.11
RUP1Q12242 GPX2YBR244W 489 nt1.86□□□□□ -2.11
RUP1Q12242 PEP1YBL017C 4740 nt1.85□□□□□ -2.11
RUP1Q12242 RTP1YMR185W 2946 nt1.85□□□□□ -2.11
RUP1Q12242 UBP1YDL122W 2430 nt1.85□□□□□ -2.11
RUP1Q12242 PLC1YPL268W 2610 nt1.85□□□□□ -2.11
RUP1Q12242 RBK1YCR036W 1002 nt1.85□□□□□ -2.11
RUP1Q12242 YHR052W-AYHR052W-A 195 nt1.85□□□□□ -2.11
RUP1Q12242 YHR054W-AYHR054W-A 195 nt1.85□□□□□ -2.11
RUP1Q12242 NBL1YHR199C-A 222 nt1.85□□□□□ -2.11
RUP1Q12242 TIF11YMR260C 462 nt1.85□□□□□ -2.11
RUP1Q12242 YBL083CYBL083C 426 nt1.85□□□□□ -2.11
RUP1Q12242 MSS11YMR164C 2277 nt1.85□□□□□ -2.11
RUP1Q12242 YLR419WYLR419W 4308 nt1.84□□□□□ -2.11
RUP1Q12242 YLR149CYLR149C 2193 nt1.84□□□□□ -2.11
RUP1Q12242 YHR125WYHR125W 306 nt1.84□□□□□ -2.11
RUP1Q12242 CRG1YHR209W 876 nt1.84□□□□□ -2.11
RUP1Q12242 YJR157WYJR157W 363 nt1.84□□□□□ -2.11
RUP1Q12242 CMC2YBL059C-A 330 nt1.84□□□□□ -2.11
RUP1Q12242 PDR8YLR266C 2106 nt1.84□□□□□ -2.12
RUP1Q12242 FAB1YFR019W 6837 nt1.83□□□□□ -2.12
RUP1Q12242 ECL1YGR146C 636 nt1.83□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 21.3 ms