Protein–RNA interactions for Protein: Q08723

RPN8, 26S proteasome regulatory subunit RPN8, yeastyeast

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN8Q08723 YOR333CYOR333C 417 nt1.75□□□□□ -2.13
RPN8Q08723 RUD3YOR216C 1455 nt1.75□□□□□ -2.13
RPN8Q08723 YHR214C-CYHR214C-C 1437 nt1.74□□□□□ -2.13
RPN8Q08723 SPE1YKL184W 1401 nt1.74□□□□□ -2.13
RPN8Q08723 FYV7YLR068W 456 nt1.74□□□□□ -2.13
RPN8Q08723 COX7YMR256C 183 nt1.74□□□□□ -2.13
RPN8Q08723 NOP15YNL110C 663 nt1.74□□□□□ -2.13
RPN8Q08723 YOR394C-AYOR394C-A 168 nt1.74□□□□□ -2.13
RPN8Q08723 RTC6YPL183W-A 282 nt1.74□□□□□ -2.13
RPN8Q08723 ROX1YPR065W 1107 nt1.74□□□□□ -2.13
RPN8Q08723 SPO22YIL073C 2928 nt1.74□□□□□ -2.13
RPN8Q08723 CFT2YLR115W 2580 nt1.74□□□□□ -2.13
RPN8Q08723 UTP21YLR409C 2820 nt1.74□□□□□ -2.13
RPN8Q08723 VPS15YBR097W 4365 nt1.74□□□□□ -2.13
RPN8Q08723 VPS8YAL002W 3825 nt1.74□□□□□ -2.13
RPN8Q08723 VOA1YGR106C 798 nt1.73□□□□□ -2.13
RPN8Q08723 YHL037CYHL037C 402 nt1.73□□□□□ -2.13
RPN8Q08723 YKR075W-AYKR075W-A 270 nt1.73□□□□□ -2.13
RPN8Q08723 FYV12YOR183W 390 nt1.73□□□□□ -2.13
RPN8Q08723 SPC29YPL124W 762 nt1.73□□□□□ -2.13
RPN8Q08723 VPS52YDR484W 1926 nt1.72□□□□□ -2.13
RPN8Q08723 TRL1YJL087C 2484 nt1.72□□□□□ -2.13
RPN8Q08723 LSO2YGR169C-A 279 nt1.72□□□□□ -2.13
RPN8Q08723 Q0017Q0017 162 nt1.72□□□□□ -2.13
RPN8Q08723 IRC10YOL015W 1761 nt1.72□□□□□ -2.13
RPN8Q08723 TRM3YDL112W 4311 nt1.72□□□□□ -2.13
RPN8Q08723 VPS34YLR240W 2628 nt1.71□□□□□ -2.13
RPN8Q08723 CDC53YDL132W 2448 nt1.71□□□□□ -2.14
RPN8Q08723 RTT101YJL047C 2529 nt1.71□□□□□ -2.14
RPN8Q08723 tT(UGU)Q1tT(UGU)Q1 76 nt1.71□□□□□ -2.14
RPN8Q08723 SEN15YMR059W 387 nt1.71□□□□□ -2.14
RPN8Q08723 YLR035C-AYLR035C-A 3468 nt1.71□□□□□ -2.14
RPN8Q08723 YDL041WYDL041W 354 nt1.7□□□□□ -2.14
RPN8Q08723 YEL030C-AYEL030C-A 315 nt1.7□□□□□ -2.14
RPN8Q08723 RPF1YHR088W 888 nt1.7□□□□□ -2.14
RPN8Q08723 RPI1YIL119C 1224 nt1.7□□□□□ -2.14
RPN8Q08723 MSL1YIR009W 336 nt1.7□□□□□ -2.14
RPN8Q08723 SEC22YLR268W 645 nt1.7□□□□□ -2.14
RPN8Q08723 PBI2YNL015W 228 nt1.7□□□□□ -2.14
RPN8Q08723 YNL122CYNL122C 348 nt1.7□□□□□ -2.14
RPN8Q08723 MNE1YOR350C 1992 nt1.7□□□□□ -2.14
RPN8Q08723 YER084W-AYER084W-A 513 nt1.69□□□□□ -2.14
RPN8Q08723 YER188C-AYER188C-A 300 nt1.69□□□□□ -2.14
RPN8Q08723 YGR045CYGR045C 363 nt1.69□□□□□ -2.14
RPN8Q08723 YHR139C-AYHR139C-A 312 nt1.69□□□□□ -2.14
RPN8Q08723 YLR053CYLR053C 327 nt1.69□□□□□ -2.14
RPN8Q08723 YOL013W-BYOL013W-B 291 nt1.69□□□□□ -2.14
RPN8Q08723 GAL7YBR018C 1101 nt1.69□□□□□ -2.14
RPN8Q08723 VPS35YJL154C 2835 nt1.69□□□□□ -2.14
RPN8Q08723 PKH3YDR466W 2697 nt1.69□□□□□ -2.14
RPN8Q08723 SSK2YNR031C 4740 nt1.69□□□□□ -2.14
RPN8Q08723 SPC72YAL047C 1869 nt1.69□□□□□ -2.14
RPN8Q08723 SOK2YMR016C 2358 nt1.69□□□□□ -2.14
RPN8Q08723 MET18YIL128W 3099 nt1.68□□□□□ -2.14
RPN8Q08723 DCP2YNL118C 2913 nt1.68□□□□□ -2.14
RPN8Q08723 KAR3YPR141C 2190 nt1.68□□□□□ -2.14
RPN8Q08723 STB4YMR019W 2850 nt1.68□□□□□ -2.14
RPN8Q08723 snR79snR79 84 nt1.68□□□□□ -2.14
RPN8Q08723 MTC7YEL033W 420 nt1.68□□□□□ -2.14
RPN8Q08723 RPL16AYIL133C 600 nt1.68□□□□□ -2.14
RPN8Q08723 HSK3YKL138C-A 210 nt1.68□□□□□ -2.14
RPN8Q08723 SNC2YOR327C 348 nt1.68□□□□□ -2.14
RPN8Q08723 EGD1YPL037C 474 nt1.68□□□□□ -2.14
RPN8Q08723 YDR341CYDR341C 1824 nt1.68□□□□□ -2.14
RPN8Q08723 PPN1YDR452W 2025 nt1.67□□□□□ -2.14
RPN8Q08723 PEP1YBL017C 4740 nt1.67□□□□□ -2.14
RPN8Q08723 RPL37BYDR500C 267 nt1.67□□□□□ -2.14
RPN8Q08723 YML084WYML084W 309 nt1.67□□□□□ -2.14
RPN8Q08723 SWT1YOR166C 1377 nt1.67□□□□□ -2.14
RPN8Q08723 MUD2YKL074C 1584 nt1.67□□□□□ -2.14
RPN8Q08723 SBE22YHR103W 2559 nt1.66□□□□□ -2.14
RPN8Q08723 CTF4YPR135W 2784 nt1.66□□□□□ -2.14
RPN8Q08723 YDL062WYDL062W 426 nt1.66□□□□□ -2.14
RPN8Q08723 YGL069CYGL069C 465 nt1.66□□□□□ -2.14
RPN8Q08723 PET123YOR158W 957 nt1.66□□□□□ -2.14
RPN8Q08723 SAR1YPL218W 573 nt1.66□□□□□ -2.14
RPN8Q08723 SLM6YBR266C 453 nt1.66□□□□□ -2.14
RPN8Q08723 SHE9YDR393W 1371 nt1.66□□□□□ -2.14
RPN8Q08723 CHS1YNL192W 3396 nt1.65□□□□□ -2.14
RPN8Q08723 CRM1YGR218W 3255 nt1.65□□□□□ -2.14
RPN8Q08723 SLM1YIL105C 2061 nt1.65□□□□□ -2.14
RPN8Q08723 YGL024WYGL024W 336 nt1.65□□□□□ -2.15
RPN8Q08723 BIG1YHR101C 1008 nt1.65□□□□□ -2.15
RPN8Q08723 SYM1YLR251W 594 nt1.65□□□□□ -2.15
RPN8Q08723 YLR269CYLR269C 351 nt1.65□□□□□ -2.15
RPN8Q08723 YLR456WYLR456W 615 nt1.65□□□□□ -2.15
RPN8Q08723 ATP19YOL077W-A 207 nt1.65□□□□□ -2.15
RPN8Q08723 CDC27YBL084C 2277 nt1.65□□□□□ -2.15
RPN8Q08723 NOT5YPR072W 1683 nt1.64□□□□□ -2.15
RPN8Q08723 AIM29YKR074W 468 nt1.64□□□□□ -2.15
RPN8Q08723 YLR202CYLR202C 327 nt1.64□□□□□ -2.15
RPN8Q08723 TOM22YNL131W 459 nt1.64□□□□□ -2.15
RPN8Q08723 YOR248WYOR248W 303 nt1.64□□□□□ -2.15
RPN8Q08723 YPR039WYPR039W 336 nt1.64□□□□□ -2.15
RPN8Q08723 YBR224WYBR224W 516 nt1.64□□□□□ -2.15
RPN8Q08723 SYH1YPL105C 2550 nt1.64□□□□□ -2.15
RPN8Q08723 RKM1YPL208W 1752 nt1.63□□□□□ -2.15
RPN8Q08723 YDR286CYDR286C 345 nt1.63□□□□□ -2.15
RPN8Q08723 YHR073W-AYHR073W-A 177 nt1.63□□□□□ -2.15
RPN8Q08723 YPL068CYPL068C 882 nt1.63□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 112.9 ms