Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 MMS22YLR320W 4365 nt2.23□□□□□ -2.05
VPS38Q05919 CDC53YDL132W 2448 nt2.23□□□□□ -2.05
VPS38Q05919 YPR097WYPR097W 3222 nt2.22□□□□□ -2.05
VPS38Q05919 YDR114CYDR114C 303 nt2.22□□□□□ -2.05
VPS38Q05919 LSO2YGR169C-A 279 nt2.22□□□□□ -2.05
VPS38Q05919 YLR406C-AYLR406C-A 150 nt2.22□□□□□ -2.05
VPS38Q05919 STH1YIL126W 4080 nt2.22□□□□□ -2.05
VPS38Q05919 VPS35YJL154C 2835 nt2.22□□□□□ -2.05
VPS38Q05919 KOG1YHR186C 4674 nt2.21□□□□□ -2.05
VPS38Q05919 MET18YIL128W 3099 nt2.21□□□□□ -2.05
VPS38Q05919 NEO1YIL048W 3456 nt2.21□□□□□ -2.06
VPS38Q05919 snR79snR79 84 nt2.21□□□□□ -2.06
VPS38Q05919 SEC22YLR268W 645 nt2.21□□□□□ -2.06
VPS38Q05919 RPS22BYLR367W 393 nt2.21□□□□□ -2.06
VPS38Q05919 YBR032WYBR032W 303 nt2.21□□□□□ -2.06
VPS38Q05919 YSW1YBR148W 1830 nt2.21□□□□□ -2.06
VPS38Q05919 NIC96YFR002W 2520 nt2.21□□□□□ -2.06
VPS38Q05919 TUS1YLR425W 3924 nt2.2□□□□□ -2.06
VPS38Q05919 SOK2YMR016C 2358 nt2.2□□□□□ -2.06
VPS38Q05919 YDL118WYDL118W 381 nt2.2□□□□□ -2.06
VPS38Q05919 VTC1YER072W 390 nt2.2□□□□□ -2.06
VPS38Q05919 AGA2YGL032C 264 nt2.2□□□□□ -2.06
VPS38Q05919 SNC2YOR327C 348 nt2.2□□□□□ -2.06
VPS38Q05919 FKS1YLR342W 5631 nt2.2□□□□□ -2.06
VPS38Q05919 CDC24YAL041W 2565 nt2.19□□□□□ -2.06
VPS38Q05919 RAV1YJR033C 4074 nt2.19□□□□□ -2.06
VPS38Q05919 SPO22YIL073C 2928 nt2.19□□□□□ -2.06
VPS38Q05919 YER121WYER121W 345 nt2.19□□□□□ -2.06
VPS38Q05919 YBL012CYBL012C 402 nt2.19□□□□□ -2.06
VPS38Q05919 RPS18BYML026C 441 nt2.19□□□□□ -2.06
VPS38Q05919 CDC33YOL139C 642 nt2.19□□□□□ -2.06
VPS38Q05919 MSS18YPR134W 807 nt2.19□□□□□ -2.06
VPS38Q05919 COX1Q0045 1605 nt2.19□□□□□ -2.06
VPS38Q05919 KAR3YPR141C 2190 nt2.19□□□□□ -2.06
VPS38Q05919 CRM1YGR218W 3255 nt2.18□□□□□ -2.06
VPS38Q05919 MSS11YMR164C 2277 nt2.18□□□□□ -2.06
VPS38Q05919 YER135CYER135C 393 nt2.18□□□□□ -2.06
VPS38Q05919 YLR154W-FYLR154W-F 141 nt2.18□□□□□ -2.06
VPS38Q05919 BNI1YNL271C 5862 nt2.18□□□□□ -2.06
VPS38Q05919 SPC72YAL047C 1869 nt2.18□□□□□ -2.06
VPS38Q05919 RGA1YOR127W 3024 nt2.17□□□□□ -2.06
VPS38Q05919 TOR2YKL203C 7425 nt2.17□□□□□ -2.06
VPS38Q05919 RRF1YHR038W 693 nt2.17□□□□□ -2.06
VPS38Q05919 YHR139C-AYHR139C-A 312 nt2.17□□□□□ -2.06
VPS38Q05919 CRG1YHR209W 876 nt2.17□□□□□ -2.06
VPS38Q05919 YOR333CYOR333C 417 nt2.17□□□□□ -2.06
VPS38Q05919 SGD1YLR336C 2700 nt2.17□□□□□ -2.06
VPS38Q05919 SET2YJL168C 2202 nt2.16□□□□□ -2.06
VPS38Q05919 YDR286CYDR286C 345 nt2.16□□□□□ -2.06
VPS38Q05919 IES5YER092W 378 nt2.16□□□□□ -2.06
VPS38Q05919 ZEO1YOL109W 342 nt2.16□□□□□ -2.06
VPS38Q05919 RIC1YLR039C 3171 nt2.16□□□□□ -2.06
VPS38Q05919 BRP1YGL007W 378 nt2.15□□□□□ -2.07
VPS38Q05919 TMA22YJR014W 597 nt2.15□□□□□ -2.07
VPS38Q05919 NFU1YKL040C 771 nt2.15□□□□□ -2.07
VPS38Q05919 FCF2YLR051C 654 nt2.15□□□□□ -2.07
VPS38Q05919 YMR001C-AYMR001C-A 231 nt2.15□□□□□ -2.07
VPS38Q05919 ERP4YOR016C 624 nt2.15□□□□□ -2.07
VPS38Q05919 EGD1YPL037C 474 nt2.15□□□□□ -2.07
VPS38Q05919 GIP3YPL137C 3831 nt2.15□□□□□ -2.07
VPS38Q05919 MNE1YOR350C 1992 nt2.14□□□□□ -2.07
VPS38Q05919 YDR250CYDR250C 276 nt2.14□□□□□ -2.07
VPS38Q05919 GPX2YBR244W 489 nt2.14□□□□□ -2.07
VPS38Q05919 VPH1YOR270C 2523 nt2.14□□□□□ -2.07
VPS38Q05919 YDR157WYDR157W 402 nt2.13□□□□□ -2.07
VPS38Q05919 YER172C-AYER172C-A 381 nt2.13□□□□□ -2.07
VPS38Q05919 HOP2YGL033W 657 nt2.13□□□□□ -2.07
VPS38Q05919 YGL069CYGL069C 465 nt2.13□□□□□ -2.07
VPS38Q05919 ATP7YKL016C 525 nt2.13□□□□□ -2.07
VPS38Q05919 CDC27YBL084C 2277 nt2.13□□□□□ -2.07
VPS38Q05919 SPO23YBR250W 1572 nt2.13□□□□□ -2.07
VPS38Q05919 TRL1YJL087C 2484 nt2.13□□□□□ -2.07
VPS38Q05919 YGL024WYGL024W 336 nt2.12□□□□□ -2.07
VPS38Q05919 URM1YIL008W 300 nt2.12□□□□□ -2.07
VPS38Q05919 YPR146CYPR146C 330 nt2.12□□□□□ -2.07
VPS38Q05919 STB4YMR019W 2850 nt2.12□□□□□ -2.07
VPS38Q05919 RTT107YHR154W 3213 nt2.12□□□□□ -2.07
VPS38Q05919 YER076W-AYER076W-A 348 nt2.11□□□□□ -2.07
VPS38Q05919 MKT1YNL085W 2493 nt2.11□□□□□ -2.07
VPS38Q05919 RUD3YOR216C 1455 nt2.1□□□□□ -2.07
VPS38Q05919 YHL009W-AYHL009W-A 1242 nt2.1□□□□□ -2.07
VPS38Q05919 YML084WYML084W 309 nt2.1□□□□□ -2.07
VPS38Q05919 YOR192C-CYOR192C-C 237 nt2.1□□□□□ -2.07
VPS38Q05919 LEE1YPL054W 906 nt2.1□□□□□ -2.07
VPS38Q05919 IST2YBR086C 2841 nt2.1□□□□□ -2.07
VPS38Q05919 YLR149CYLR149C 2193 nt2.1□□□□□ -2.07
VPS38Q05919 NOT5YPR072W 1683 nt2.09□□□□□ -2.07
VPS38Q05919 COS111YBR203W 2775 nt2.09□□□□□ -2.07
VPS38Q05919 QCR7YDR529C 384 nt2.09□□□□□ -2.07
VPS38Q05919 YER023C-AYER023C-A 213 nt2.09□□□□□ -2.07
VPS38Q05919 YER079WYER079W 633 nt2.09□□□□□ -2.07
VPS38Q05919 YOL159CYOL159C 516 nt2.09□□□□□ -2.07
VPS38Q05919 DIE2YGR227W 1578 nt2.09□□□□□ -2.08
VPS38Q05919 YPP1YGR198W 2454 nt2.08□□□□□ -2.08
VPS38Q05919 RTT101YJL047C 2529 nt2.08□□□□□ -2.08
VPS38Q05919 HMRA1YCR097W 381 nt2.08□□□□□ -2.08
VPS38Q05919 YDR269CYDR269C 324 nt2.08□□□□□ -2.08
VPS38Q05919 YER087C-AYER087C-A 552 nt2.08□□□□□ -2.08
VPS38Q05919 VPS8YAL002W 3825 nt2.08□□□□□ -2.08
VPS38Q05919 HSK3YKL138C-A 210 nt2.08□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 86.4 ms