Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 YNL010WYNL010W 726 nt2.47□□□□□ -2.01
VPS4P52917 ZEO1YOL109W 342 nt2.47□□□□□ -2.01
VPS4P52917 YOL159CYOL159C 516 nt2.47□□□□□ -2.01
VPS4P52917 YPR012WYPR012W 255 nt2.47□□□□□ -2.01
VPS4P52917 YPR170W-AYPR170W-A 186 nt2.47□□□□□ -2.01
VPS4P52917 YPR097WYPR097W 3222 nt2.47□□□□□ -2.01
VPS4P52917 YJL070CYJL070C 2667 nt2.46□□□□□ -2.01
VPS4P52917 GYP5YPL249C 2685 nt2.46□□□□□ -2.01
VPS4P52917 IRC10YOL015W 1761 nt2.46□□□□□ -2.02
VPS4P52917 HSH155YMR288W 2916 nt2.46□□□□□ -2.02
VPS4P52917 SWA2YDR320C 2007 nt2.46□□□□□ -2.02
VPS4P52917 IPT1YDR072C 1584 nt2.46□□□□□ -2.02
VPS4P52917 MPH1YIR002C 2982 nt2.46□□□□□ -2.02
VPS4P52917 EGD1YPL037C 474 nt2.46□□□□□ -2.02
VPS4P52917 ROX1YPR065W 1107 nt2.46□□□□□ -2.02
VPS4P52917 YSW1YBR148W 1830 nt2.46□□□□□ -2.02
VPS4P52917 TFC3YAL001C 3483 nt2.46□□□□□ -2.02
VPS4P52917 CBF2YGR140W 2871 nt2.45□□□□□ -2.02
VPS4P52917 FMP16YDR070C 282 nt2.45□□□□□ -2.02
VPS4P52917 YER087C-AYER087C-A 552 nt2.45□□□□□ -2.02
VPS4P52917 YHR071C-AYHR071C-A 321 nt2.45□□□□□ -2.02
VPS4P52917 EDS1YBR033W 2760 nt2.45□□□□□ -2.02
VPS4P52917 NAN1YPL126W 2691 nt2.45□□□□□ -2.02
VPS4P52917 COS111YBR203W 2775 nt2.44□□□□□ -2.02
VPS4P52917 snR79snR79 84 nt2.44□□□□□ -2.02
VPS4P52917 SWF1YDR126W 1011 nt2.44□□□□□ -2.02
VPS4P52917 SDC1YDR469W 528 nt2.44□□□□□ -2.02
VPS4P52917 VOA1YGR106C 798 nt2.44□□□□□ -2.02
VPS4P52917 YLR334CYLR334C 381 nt2.44□□□□□ -2.02
VPS4P52917 YMR320WYMR320W 306 nt2.44□□□□□ -2.02
VPS4P52917 YMR324CYMR324C 243 nt2.44□□□□□ -2.02
VPS4P52917 ERP4YOR016C 624 nt2.44□□□□□ -2.02
VPS4P52917 YOR192C-CYOR192C-C 237 nt2.44□□□□□ -2.02
VPS4P52917 YOR392WYOR392W 444 nt2.44□□□□□ -2.02
VPS4P52917 COX1Q0045 1605 nt2.43□□□□□ -2.02
VPS4P52917 TIM9YEL020W-A 264 nt2.43□□□□□ -2.02
VPS4P52917 YHR138CYHR138C 345 nt2.43□□□□□ -2.02
VPS4P52917 NFU1YKL040C 771 nt2.43□□□□□ -2.02
VPS4P52917 YAL059C-AYAL059C-A 423 nt2.43□□□□□ -2.02
VPS4P52917 YOR293C-AYOR293C-A 150 nt2.43□□□□□ -2.02
VPS4P52917 SPC72YAL047C 1869 nt2.43□□□□□ -2.02
VPS4P52917 YJR098CYJR098C 1971 nt2.43□□□□□ -2.02
VPS4P52917 NEO1YIL048W 3456 nt2.43□□□□□ -2.02
VPS4P52917 MSL5YLR116W 1431 nt2.42□□□□□ -2.02
VPS4P52917 ARP7YPR034W 1434 nt2.42□□□□□ -2.02
VPS4P52917 YEL043WYEL043W 2871 nt2.42□□□□□ -2.02
VPS4P52917 TWF1YGR080W 999 nt2.42□□□□□ -2.02
VPS4P52917 GRX8YLR364W 330 nt2.42□□□□□ -2.02
VPS4P52917 INO80YGL150C 4470 nt2.42□□□□□ -2.02
VPS4P52917 BFA1YJR053W 1725 nt2.42□□□□□ -2.02
VPS4P52917 MSS11YMR164C 2277 nt2.42□□□□□ -2.02
VPS4P52917 TAE2YPL009C 3117 nt2.42□□□□□ -2.02
VPS4P52917 GIS1YDR096W 2685 nt2.41□□□□□ -2.02
VPS4P52917 LSO2YGR169C-A 279 nt2.41□□□□□ -2.02
VPS4P52917 YHL009W-AYHL009W-A 1242 nt2.41□□□□□ -2.02
VPS4P52917 YBR285WYBR285W 435 nt2.41□□□□□ -2.02
VPS4P52917 BNI1YNL271C 5862 nt2.41□□□□□ -2.02
VPS4P52917 RRP6YOR001W 2202 nt2.4□□□□□ -2.03
VPS4P52917 SDH7YDR511W 402 nt2.4□□□□□ -2.03
VPS4P52917 YOR053WYOR053W 342 nt2.4□□□□□ -2.03
VPS4P52917 RTC6YPL183W-A 282 nt2.4□□□□□ -2.03
VPS4P52917 MKT1YNL085W 2493 nt2.4□□□□□ -2.03
VPS4P52917 YER076W-AYER076W-A 348 nt2.39□□□□□ -2.03
VPS4P52917 NOP10YHR072W-A 177 nt2.39□□□□□ -2.03
VPS4P52917 YHR175W-AYHR175W-A 150 nt2.39□□□□□ -2.03
VPS4P52917 YLR287CYLR287C 1068 nt2.39□□□□□ -2.03
VPS4P52917 MF(ALPHA)1YPL187W 498 nt2.39□□□□□ -2.03
VPS4P52917 YPL261CYPL261C 309 nt2.39□□□□□ -2.03
VPS4P52917 SIR4YDR227W 4077 nt2.38□□□□□ -2.03
VPS4P52917 CDC24YAL041W 2565 nt2.38□□□□□ -2.03
VPS4P52917 AGC1YPR021C 2709 nt2.38□□□□□ -2.03
VPS4P52917 SMD1YGR074W 441 nt2.38□□□□□ -2.03
VPS4P52917 URM1YIL008W 300 nt2.38□□□□□ -2.03
VPS4P52917 SEC22YLR268W 645 nt2.38□□□□□ -2.03
VPS4P52917 IRA2YOL081W 9240 nt2.38□□□□□ -2.03
VPS4P52917 KAR3YPR141C 2190 nt2.37□□□□□ -2.03
VPS4P52917 SWT1YOR166C 1377 nt2.37□□□□□ -2.03
VPS4P52917 DIE2YGR227W 1578 nt2.37□□□□□ -2.03
VPS4P52917 CDC50YCR094W 1176 nt2.37□□□□□ -2.03
VPS4P52917 CBS1YDL069C 690 nt2.37□□□□□ -2.03
VPS4P52917 SNC1YAL030W 354 nt2.37□□□□□ -2.03
VPS4P52917 RPS18BYML026C 441 nt2.37□□□□□ -2.03
VPS4P52917 UBC7YMR022W 498 nt2.37□□□□□ -2.03
VPS4P52917 YJL052C-AYJL052C-A 120 nt2.36□□□□□ -2.03
VPS4P52917 YAL068W-AYAL068W-A 255 nt2.36□□□□□ -2.03
VPS4P52917 UBR1YGR184C 5853 nt2.36□□□□□ -2.03
VPS4P52917 SSD1YDR293C 3753 nt2.35□□□□□ -2.03
VPS4P52917 GIM4YEL003W 336 nt2.35□□□□□ -2.03
VPS4P52917 YER121WYER121W 345 nt2.35□□□□□ -2.03
VPS4P52917 tR(ACG)Q2tR(ACG)Q2 74 nt2.35□□□□□ -2.03
VPS4P52917 RPS24BYIL069C 408 nt2.35□□□□□ -2.03
VPS4P52917 MRPL50YNR022C 420 nt2.35□□□□□ -2.03
VPS4P52917 YPR146CYPR146C 330 nt2.35□□□□□ -2.03
VPS4P52917 SOK2YMR016C 2358 nt2.35□□□□□ -2.03
VPS4P52917 TMA22YJR014W 597 nt2.34□□□□□ -2.03
VPS4P52917 PAU8YAL068C 363 nt2.34□□□□□ -2.03
VPS4P52917 PAU20YOL161C 363 nt2.34□□□□□ -2.03
VPS4P52917 GIP3YPL137C 3831 nt2.34□□□□□ -2.03
VPS4P52917 YPL185WYPL185W 396 nt2.34□□□□□ -2.03
VPS4P52917 VPS35YJL154C 2835 nt2.34□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 63.8 ms