Protein–RNA interactions for Protein: P40479

SDP1, Dual-specificity protein phosphatase SDP1, yeastyeast

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDP1P40479 PFD1YJL179W 330 nt2.77□□□□□ -1.97
SDP1P40479 HHT1YBR010W 411 nt2.77□□□□□ -1.97
SDP1P40479 GIS4YML006C 2325 nt2.77□□□□□ -1.97
SDP1P40479 RPA190YOR341W 4995 nt2.77□□□□□ -1.97
SDP1P40479 PTC5YOR090C 1719 nt2.76□□□□□ -1.97
SDP1P40479 RGR1YLR071C 3249 nt2.76□□□□□ -1.97
SDP1P40479 RRP12YPL012W 3687 nt2.76□□□□□ -1.97
SDP1P40479 snR60snR60 104 nt2.76□□□□□ -1.97
SDP1P40479 YBL065WYBL065W 345 nt2.76□□□□□ -1.97
SDP1P40479 YOR011W-AYOR011W-A 207 nt2.76□□□□□ -1.97
SDP1P40479 YPR063CYPR063C 423 nt2.76□□□□□ -1.97
SDP1P40479 NPR2YEL062W 1848 nt2.76□□□□□ -1.97
SDP1P40479 ROG1YGL144C 2058 nt2.76□□□□□ -1.97
SDP1P40479 SEC7YDR170C 6030 nt2.76□□□□□ -1.97
SDP1P40479 KSP1YHR082C 3090 nt2.76□□□□□ -1.97
SDP1P40479 BPT1YLL015W 4680 nt2.76□□□□□ -1.97
SDP1P40479 UBP11YKR098C 2154 nt2.76□□□□□ -1.97
SDP1P40479 SOK2YMR016C 2358 nt2.75□□□□□ -1.97
SDP1P40479 PAN3YKL025C 2040 nt2.75□□□□□ -1.97
SDP1P40479 HDA3YPR179C 1968 nt2.75□□□□□ -1.97
SDP1P40479 PRP8YHR165C 7242 nt2.75□□□□□ -1.97
SDP1P40479 SPO71YDR104C 3738 nt2.75□□□□□ -1.97
SDP1P40479 KAP104YBR017C 2757 nt2.75□□□□□ -1.97
SDP1P40479 NUP120YKL057C 3114 nt2.75□□□□□ -1.97
SDP1P40479 YBT1YLL048C 4986 nt2.74□□□□□ -1.97
SDP1P40479 IKI3YLR384C 4050 nt2.74□□□□□ -1.97
SDP1P40479 TOF2YKR010C 2316 nt2.74□□□□□ -1.97
SDP1P40479 YPR089WYPR089W 2667 nt2.74□□□□□ -1.97
SDP1P40479 FMP32YFL046W 624 nt2.74□□□□□ -1.97
SDP1P40479 RPL38YLR325C 237 nt2.74□□□□□ -1.97
SDP1P40479 KEL2YGR238C 2649 nt2.74□□□□□ -1.97
SDP1P40479 GUP1YGL084C 1683 nt2.73□□□□□ -1.97
SDP1P40479 ALK2YBL009W 2031 nt2.73□□□□□ -1.97
SDP1P40479 tQ(UUG)BtQ(UUG)B 72 nt2.73□□□□□ -1.97
SDP1P40479 CYB5YNL111C 363 nt2.73□□□□□ -1.97
SDP1P40479 YTA7YGR270W 4140 nt2.73□□□□□ -1.97
SDP1P40479 VPS35YJL154C 2835 nt2.73□□□□□ -1.97
SDP1P40479 YGR250CYGR250C 2346 nt2.73□□□□□ -1.97
SDP1P40479 GPG1YGL121C 381 nt2.72□□□□□ -1.97
SDP1P40479 PHD1YKL043W 1101 nt2.72□□□□□ -1.97
SDP1P40479 PCC1YKR095W-A 267 nt2.72□□□□□ -1.97
SDP1P40479 YBL008W-AYBL008W-A 240 nt2.72□□□□□ -1.97
SDP1P40479 YMR230W-AYMR230W-A 189 nt2.72□□□□□ -1.97
SDP1P40479 RPL20AYMR242C 519 nt2.72□□□□□ -1.97
SDP1P40479 SNC2YOR327C 348 nt2.72□□□□□ -1.97
SDP1P40479 MVP1YMR004W 1536 nt2.72□□□□□ -1.97
SDP1P40479 RRM3YHR031C 2172 nt2.71□□□□□ -1.97
SDP1P40479 ECM29YHL030W 5607 nt2.71□□□□□ -1.98
SDP1P40479 BFA1YJR053W 1725 nt2.71□□□□□ -1.98
SDP1P40479 PRE4YFR050C 801 nt2.71□□□□□ -1.98
SDP1P40479 YML007C-AYML007C-A 111 nt2.71□□□□□ -1.98
SDP1P40479 YML037CYML037C 1023 nt2.71□□□□□ -1.98
SDP1P40479 YMR172C-AYMR172C-A 384 nt2.71□□□□□ -1.98
SDP1P40479 PMR1YGL167C 2853 nt2.71□□□□□ -1.98
SDP1P40479 RPN1YHR027C 2982 nt2.71□□□□□ -1.98
SDP1P40479 SCW11YGL028C 1629 nt2.71□□□□□ -1.98
SDP1P40479 TMN3YER113C 2121 nt2.71□□□□□ -1.98
SDP1P40479 PRP6YBR055C 2700 nt2.7□□□□□ -1.98
SDP1P40479 MMS1YPR164W 4224 nt2.7□□□□□ -1.98
SDP1P40479 FLO5YHR211W 3228 nt2.7□□□□□ -1.98
SDP1P40479 YDL185C-AYDL185C-A 228 nt2.7□□□□□ -1.98
SDP1P40479 YDR426CYDR426C 378 nt2.7□□□□□ -1.98
SDP1P40479 PAU2YEL049W 363 nt2.7□□□□□ -1.98
SDP1P40479 SUP56tL(CAA)A 82 nt2.7□□□□□ -1.98
SDP1P40479 SUP53tL(CAA)C 82 nt2.7□□□□□ -1.98
SDP1P40479 tL(CAA)DtL(CAA)D 82 nt2.7□□□□□ -1.98
SDP1P40479 tL(CAA)G1tL(CAA)G1 82 nt2.7□□□□□ -1.98
SDP1P40479 SUP54tL(CAA)G2 82 nt2.7□□□□□ -1.98
SDP1P40479 tL(CAA)G3tL(CAA)G3 82 nt2.7□□□□□ -1.98
SDP1P40479 tL(CAA)KtL(CAA)K 82 nt2.7□□□□□ -1.98
SDP1P40479 tL(CAA)LtL(CAA)L 82 nt2.7□□□□□ -1.98
SDP1P40479 tL(CAA)MtL(CAA)M 82 nt2.7□□□□□ -1.98
SDP1P40479 tL(CAA)NtL(CAA)N 82 nt2.7□□□□□ -1.98
SDP1P40479 FPR1YNL135C 345 nt2.7□□□□□ -1.98
SDP1P40479 DBP7YKR024C 2229 nt2.7□□□□□ -1.98
SDP1P40479 DRS2YAL026C 4068 nt2.69□□□□□ -1.98
SDP1P40479 UBP14YBR058C 2346 nt2.69□□□□□ -1.98
SDP1P40479 HRD3YLR207W 2502 nt2.69□□□□□ -1.98
SDP1P40479 RGC1YPR115W 3252 nt2.69□□□□□ -1.98
SDP1P40479 RPL6AYML073C 531 nt2.69□□□□□ -1.98
SDP1P40479 YOR302WYOR302W 78 nt2.69□□□□□ -1.98
SDP1P40479 VMA9YCL005W-A 222 nt2.69□□□□□ -1.98
SDP1P40479 SMD1YGR074W 441 nt2.68□□□□□ -1.98
SDP1P40479 YHL005CYHL005C 393 nt2.68□□□□□ -1.98
SDP1P40479 UPS1YLR193C 528 nt2.68□□□□□ -1.98
SDP1P40479 YMR141W-AYMR141W-A 225 nt2.68□□□□□ -1.98
SDP1P40479 NUT2YPR168W 474 nt2.68□□□□□ -1.98
SDP1P40479 NMD2YHR077C 3270 nt2.68□□□□□ -1.98
SDP1P40479 HEH2YDR458C 1992 nt2.67□□□□□ -1.98
SDP1P40479 PEX8YGR077C 1770 nt2.67□□□□□ -1.98
SDP1P40479 DUG2YBR281C 2637 nt2.67□□□□□ -1.98
SDP1P40479 FMP16YDR070C 282 nt2.67□□□□□ -1.98
SDP1P40479 YGL052WYGL052W 306 nt2.67□□□□□ -1.98
SDP1P40479 FRE2YKL220C 2136 nt2.67□□□□□ -1.98
SDP1P40479 YNL338WYNL338W 159 nt2.67□□□□□ -1.98
SDP1P40479 YBR224WYBR224W 516 nt2.67□□□□□ -1.98
SDP1P40479 RSN1YMR266W 2862 nt2.67□□□□□ -1.98
SDP1P40479 NOP10YHR072W-A 177 nt2.66□□□□□ -1.98
SDP1P40479 YNL028WYNL028W 318 nt2.66□□□□□ -1.98
SDP1P40479 YOR333CYOR333C 417 nt2.66□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 31.4 ms