Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 TIM10YHR005C-A 282 nt1.39□□□□□ -2.19
SSH1P38353 YNL010WYNL010W 726 nt1.39□□□□□ -2.19
SSH1P38353 YNL146C-AYNL146C-A 195 nt1.39□□□□□ -2.19
SSH1P38353 RIC1YLR039C 3171 nt1.39□□□□□ -2.19
SSH1P38353 NBP1YLR457C 960 nt1.38□□□□□ -2.19
SSH1P38353 COA6YMR244C-A 315 nt1.38□□□□□ -2.19
SSH1P38353 PGA1YNL158W 597 nt1.38□□□□□ -2.19
SSH1P38353 YBP1YBR216C 2025 nt1.38□□□□□ -2.19
SSH1P38353 PIK1YNL267W 3201 nt1.38□□□□□ -2.19
SSH1P38353 DAS1YJL149W 1992 nt1.38□□□□□ -2.19
SSH1P38353 REF2YDR195W 1602 nt1.37□□□□□ -2.19
SSH1P38353 YER175W-AYER175W-A 165 nt1.37□□□□□ -2.19
SSH1P38353 YGL015CYGL015C 393 nt1.37□□□□□ -2.19
SSH1P38353 LRP1YHR081W 555 nt1.37□□□□□ -2.19
SSH1P38353 SEC22YLR268W 645 nt1.37□□□□□ -2.19
SSH1P38353 YLR271WYLR271W 825 nt1.37□□□□□ -2.19
SSH1P38353 SWS2YNL081C 432 nt1.37□□□□□ -2.19
SSH1P38353 BRR2YER172C 6492 nt1.37□□□□□ -2.19
SSH1P38353 PET309YLR067C 2898 nt1.37□□□□□ -2.19
SSH1P38353 YLR149CYLR149C 2193 nt1.37□□□□□ -2.19
SSH1P38353 AFR1YDR085C 1863 nt1.36□□□□□ -2.19
SSH1P38353 YDR220CYDR220C 294 nt1.36□□□□□ -2.19
SSH1P38353 CHZ1YER030W 462 nt1.36□□□□□ -2.19
SSH1P38353 YBL029C-AYBL029C-A 285 nt1.36□□□□□ -2.19
SSH1P38353 TIF11YMR260C 462 nt1.36□□□□□ -2.19
SSH1P38353 YPL039WYPL039W 951 nt1.36□□□□□ -2.19
SSH1P38353 IRA1YBR140C 9279 nt1.35□□□□□ -2.19
SSH1P38353 RTR2YDR066C 591 nt1.35□□□□□ -2.19
SSH1P38353 LSO2YGR169C-A 279 nt1.35□□□□□ -2.19
SSH1P38353 RPL37AYLR185W 267 nt1.35□□□□□ -2.19
SSH1P38353 GPX2YBR244W 489 nt1.35□□□□□ -2.19
SSH1P38353 SEC63YOR254C 1992 nt1.35□□□□□ -2.19
SSH1P38353 MDM20YOL076W 2391 nt1.35□□□□□ -2.19
SSH1P38353 NOT5YPR072W 1683 nt1.35□□□□□ -2.19
SSH1P38353 SEC21YNL287W 2808 nt1.34□□□□□ -2.19
SSH1P38353 RBK1YCR036W 1002 nt1.34□□□□□ -2.19
SSH1P38353 YCR043CYCR043C 384 nt1.34□□□□□ -2.19
SSH1P38353 YER088C-AYER088C-A 324 nt1.34□□□□□ -2.19
SSH1P38353 VMA21YGR105W 234 nt1.34□□□□□ -2.19
SSH1P38353 TRX1YLR043C 312 nt1.34□□□□□ -2.19
SSH1P38353 YBL083CYBL083C 426 nt1.34□□□□□ -2.19
SSH1P38353 CCH1YGR217W 6120 nt1.34□□□□□ -2.2
SSH1P38353 YLR422WYLR422W 5799 nt1.34□□□□□ -2.2
SSH1P38353 MEC1YBR136W 7107 nt1.33□□□□□ -2.2
SSH1P38353 VPS52YDR484W 1926 nt1.33□□□□□ -2.2
SSH1P38353 YGL024WYGL024W 336 nt1.33□□□□□ -2.2
SSH1P38353 SLX9YGR081C 633 nt1.33□□□□□ -2.2
SSH1P38353 GIC1YHR061C 945 nt1.33□□□□□ -2.2
SSH1P38353 IRC19YLL033W 693 nt1.33□□□□□ -2.2
SSH1P38353 YLR252WYLR252W 306 nt1.33□□□□□ -2.2
SSH1P38353 CMC2YBL059C-A 330 nt1.33□□□□□ -2.2
SSH1P38353 YPL197CYPL197C 414 nt1.33□□□□□ -2.2
SSH1P38353 YPR147CYPR147C 915 nt1.33□□□□□ -2.2
SSH1P38353 HKR1YDR420W 5409 nt1.33□□□□□ -2.2
SSH1P38353 MSC6YOR354C 2079 nt1.32□□□□□ -2.2
SSH1P38353 YDL041WYDL041W 354 nt1.32□□□□□ -2.2
SSH1P38353 tT(UGU)Q1tT(UGU)Q1 76 nt1.32□□□□□ -2.2
SSH1P38353 YIL102CYIL102C 306 nt1.32□□□□□ -2.2
SSH1P38353 YJR140W-AYJR140W-A 150 nt1.32□□□□□ -2.2
SSH1P38353 YOR152CYOR152C 771 nt1.32□□□□□ -2.2
SSH1P38353 YBR224WYBR224W 516 nt1.32□□□□□ -2.2
SSH1P38353 ASM4YDL088C 1587 nt1.32□□□□□ -2.2
SSH1P38353 ZRG8YER033C 3231 nt1.32□□□□□ -2.2
SSH1P38353 MSH6YDR097C 3729 nt1.31□□□□□ -2.2
SSH1P38353 KAR3YPR141C 2190 nt1.31□□□□□ -2.2
SSH1P38353 SEN15YMR059W 387 nt1.31□□□□□ -2.2
SSH1P38353 TRM3YDL112W 4311 nt1.31□□□□□ -2.2
SSH1P38353 UTP13YLR222C 2454 nt1.31□□□□□ -2.2
SSH1P38353 SKI3YPR189W 4299 nt1.3□□□□□ -2.2
SSH1P38353 YJR079WYJR079W 330 nt1.3□□□□□ -2.2
SSH1P38353 YKL023C-AYKL023C-A 228 nt1.3□□□□□ -2.2
SSH1P38353 RCN1YKL159C 636 nt1.3□□□□□ -2.2
SSH1P38353 SEY1YOR165W 2331 nt1.3□□□□□ -2.2
SSH1P38353 SGD1YLR336C 2700 nt1.3□□□□□ -2.2
SSH1P38353 tQ(UUG)E2tQ(UUG)E2 72 nt1.29□□□□□ -2.2
SSH1P38353 YIL029CYIL029C 429 nt1.29□□□□□ -2.2
SSH1P38353 COX7YMR256C 183 nt1.29□□□□□ -2.2
SSH1P38353 YOL159CYOL159C 516 nt1.29□□□□□ -2.2
SSH1P38353 TRM732YMR259C 4263 nt1.29□□□□□ -2.2
SSH1P38353 CDC24YAL041W 2565 nt1.29□□□□□ -2.2
SSH1P38353 HMI1YOL095C 2121 nt1.28□□□□□ -2.2
SSH1P38353 YGR250CYGR250C 2346 nt1.28□□□□□ -2.2
SSH1P38353 IRR1YIL026C 3453 nt1.28□□□□□ -2.2
SSH1P38353 YDL016CYDL016C 303 nt1.28□□□□□ -2.2
SSH1P38353 YER121WYER121W 345 nt1.28□□□□□ -2.2
SSH1P38353 SPO13YHR014W 876 nt1.28□□□□□ -2.2
SSH1P38353 RPC10YHR143W-A 213 nt1.28□□□□□ -2.2
SSH1P38353 ABM1YJR108W 372 nt1.28□□□□□ -2.2
SSH1P38353 PET123YOR158W 957 nt1.28□□□□□ -2.2
SSH1P38353 YPR177CYPR177C 372 nt1.28□□□□□ -2.2
SSH1P38353 FIG2YCR089W 4830 nt1.28□□□□□ -2.2
SSH1P38353 MNL2YLR057W 2550 nt1.28□□□□□ -2.2
SSH1P38353 KAP122YGL016W 3246 nt1.28□□□□□ -2.21
SSH1P38353 OCA6YDR067C 675 nt1.27□□□□□ -2.21
SSH1P38353 IES5YER092W 378 nt1.27□□□□□ -2.21
SSH1P38353 PFD1YJL179W 330 nt1.27□□□□□ -2.21
SSH1P38353 AFB1YLR040C 675 nt1.27□□□□□ -2.21
SSH1P38353 YLR140WYLR140W 327 nt1.27□□□□□ -2.21
SSH1P38353 PEP3YLR148W 2757 nt1.27□□□□□ -2.21
SSH1P38353 PBY1YBR094W 2262 nt1.27□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms