Protein–RNA interactions for Protein: Q06688

BER1, SRR1-like protein BER1, yeastyeast

Known RBP Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BER1Q06688 RTP1YMR185W 2946 nt1.63□□□□□ -2.15
BER1Q06688 RIC1YLR039C 3171 nt1.62□□□□□ -2.15
BER1Q06688 YDL068WYDL068W 330 nt1.62□□□□□ -2.15
BER1Q06688 YDR042CYDR042C 603 nt1.62□□□□□ -2.15
BER1Q06688 BRP1YGL007W 378 nt1.62□□□□□ -2.15
BER1Q06688 SCEIQ0160 708 nt1.62□□□□□ -2.15
BER1Q06688 YHR073W-AYHR073W-A 177 nt1.62□□□□□ -2.15
BER1Q06688 PRP21YJL203W 843 nt1.62□□□□□ -2.15
BER1Q06688 RPL37AYLR185W 267 nt1.62□□□□□ -2.15
BER1Q06688 YMR247W-AYMR247W-A 144 nt1.62□□□□□ -2.15
BER1Q06688 JIP5YPR169W 1479 nt1.62□□□□□ -2.15
BER1Q06688 SKP2YNL311C 2292 nt1.61□□□□□ -2.15
BER1Q06688 MUD2YKL074C 1584 nt1.61□□□□□ -2.15
BER1Q06688 YDL187CYDL187C 330 nt1.61□□□□□ -2.15
BER1Q06688 YFL012WYFL012W 447 nt1.61□□□□□ -2.15
BER1Q06688 YGL015CYGL015C 393 nt1.61□□□□□ -2.15
BER1Q06688 YGL069CYGL069C 465 nt1.61□□□□□ -2.15
BER1Q06688 RPS22BYLR367W 393 nt1.61□□□□□ -2.15
BER1Q06688 YNL146C-AYNL146C-A 195 nt1.61□□□□□ -2.15
BER1Q06688 NUP120YKL057C 3114 nt1.61□□□□□ -2.15
BER1Q06688 SSQ1YLR369W 1974 nt1.61□□□□□ -2.15
BER1Q06688 VPS34YLR240W 2628 nt1.6□□□□□ -2.15
BER1Q06688 PKH3YDR466W 2697 nt1.6□□□□□ -2.15
BER1Q06688 REF2YDR195W 1602 nt1.6□□□□□ -2.15
BER1Q06688 TBS1YBR150C 3285 nt1.6□□□□□ -2.15
BER1Q06688 YIR020CYIR020C 303 nt1.6□□□□□ -2.15
BER1Q06688 NCE101YJL205C 162 nt1.6□□□□□ -2.15
BER1Q06688 YMR324CYMR324C 243 nt1.6□□□□□ -2.15
BER1Q06688 SPC29YPL124W 762 nt1.6□□□□□ -2.15
BER1Q06688 YCL007CYCL007C 393 nt1.6□□□□□ -2.15
BER1Q06688 MMS22YLR320W 4365 nt1.6□□□□□ -2.15
BER1Q06688 NAB6YML117W 3405 nt1.59□□□□□ -2.15
BER1Q06688 VPS41YDR080W 2979 nt1.59□□□□□ -2.15
BER1Q06688 SLX9YGR081C 633 nt1.59□□□□□ -2.15
BER1Q06688 TIM10YHR005C-A 282 nt1.59□□□□□ -2.15
BER1Q06688 YBL029C-AYBL029C-A 285 nt1.59□□□□□ -2.15
BER1Q06688 SIP18YMR175W 240 nt1.59□□□□□ -2.15
BER1Q06688 RPL36BYPL249C-A 303 nt1.59□□□□□ -2.15
BER1Q06688 HSL1YKL101W 4557 nt1.59□□□□□ -2.16
BER1Q06688 AFR1YDR085C 1863 nt1.58□□□□□ -2.16
BER1Q06688 HIR3YJR140C 4947 nt1.58□□□□□ -2.16
BER1Q06688 CHZ1YER030W 462 nt1.58□□□□□ -2.16
BER1Q06688 VTC1YER072W 390 nt1.58□□□□□ -2.16
BER1Q06688 YDR210W-AYDR210W-A 1317 nt1.58□□□□□ -2.16
BER1Q06688 YOR343W-AYOR343W-A 1317 nt1.58□□□□□ -2.16
BER1Q06688 RTR2YDR066C 591 nt1.57□□□□□ -2.16
BER1Q06688 YGR018CYGR018C 330 nt1.57□□□□□ -2.16
BER1Q06688 RCN1YKL159C 636 nt1.57□□□□□ -2.16
BER1Q06688 SEC22YLR268W 645 nt1.57□□□□□ -2.16
BER1Q06688 YLR271WYLR271W 825 nt1.57□□□□□ -2.16
BER1Q06688 GPX2YBR244W 489 nt1.57□□□□□ -2.16
BER1Q06688 IRC10YOL015W 1761 nt1.57□□□□□ -2.16
BER1Q06688 SEC63YOR254C 1992 nt1.56□□□□□ -2.16
BER1Q06688 UTP21YLR409C 2820 nt1.56□□□□□ -2.16
BER1Q06688 MON2YNL297C 4911 nt1.56□□□□□ -2.16
BER1Q06688 NOT5YPR072W 1683 nt1.56□□□□□ -2.16
BER1Q06688 YER068C-AYER068C-A 432 nt1.56□□□□□ -2.16
BER1Q06688 VMA21YGR105W 234 nt1.56□□□□□ -2.16
BER1Q06688 LRP1YHR081W 555 nt1.56□□□□□ -2.16
BER1Q06688 GYP5YPL249C 2685 nt1.56□□□□□ -2.16
BER1Q06688 SWT1YOR166C 1377 nt1.56□□□□□ -2.16
BER1Q06688 RPL31AYDL075W 342 nt1.55□□□□□ -2.16
BER1Q06688 YDR220CYDR220C 294 nt1.55□□□□□ -2.16
BER1Q06688 YER175W-AYER175W-A 165 nt1.55□□□□□ -2.16
BER1Q06688 LSO2YGR169C-A 279 nt1.55□□□□□ -2.16
BER1Q06688 GIC1YHR061C 945 nt1.55□□□□□ -2.16
BER1Q06688 PGA1YNL158W 597 nt1.55□□□□□ -2.16
BER1Q06688 YPL197CYPL197C 414 nt1.55□□□□□ -2.16
BER1Q06688 BPH1YCR032W 6504 nt1.55□□□□□ -2.16
BER1Q06688 YLR149CYLR149C 2193 nt1.55□□□□□ -2.16
BER1Q06688 TFC8YPL007C 1767 nt1.54□□□□□ -2.16
BER1Q06688 DAS1YJL149W 1992 nt1.54□□□□□ -2.16
BER1Q06688 PAU3YCR104W 375 nt1.54□□□□□ -2.16
BER1Q06688 YEL018C-AYEL018C-A 534 nt1.54□□□□□ -2.16
BER1Q06688 YJR140W-AYJR140W-A 150 nt1.54□□□□□ -2.16
BER1Q06688 YLR252WYLR252W 306 nt1.54□□□□□ -2.16
BER1Q06688 CMC2YBL059C-A 330 nt1.54□□□□□ -2.16
BER1Q06688 SWS2YNL081C 432 nt1.54□□□□□ -2.16
BER1Q06688 YBL083CYBL083C 426 nt1.54□□□□□ -2.16
BER1Q06688 SAR1YPL218W 573 nt1.54□□□□□ -2.16
BER1Q06688 LYS9YNR050C 1341 nt1.54□□□□□ -2.16
BER1Q06688 YJL016WYJL016W 1686 nt1.54□□□□□ -2.16
BER1Q06688 UTP13YLR222C 2454 nt1.54□□□□□ -2.16
BER1Q06688 ZRG8YER033C 3231 nt1.53□□□□□ -2.16
BER1Q06688 ATP7YKL016C 525 nt1.53□□□□□ -2.16
BER1Q06688 YKL023C-AYKL023C-A 228 nt1.53□□□□□ -2.16
BER1Q06688 TIF11YMR260C 462 nt1.53□□□□□ -2.16
BER1Q06688 YPR147CYPR147C 915 nt1.53□□□□□ -2.16
BER1Q06688 MNL2YLR057W 2550 nt1.53□□□□□ -2.17
BER1Q06688 YCR043CYCR043C 384 nt1.52□□□□□ -2.17
BER1Q06688 tC(GCA)BtC(GCA)B 72 nt1.52□□□□□ -2.17
BER1Q06688 tC(GCA)GtC(GCA)G 72 nt1.52□□□□□ -2.17
BER1Q06688 tC(GCA)P1tC(GCA)P1 72 nt1.52□□□□□ -2.17
BER1Q06688 tC(GCA)P2tC(GCA)P2 72 nt1.52□□□□□ -2.17
BER1Q06688 SPO13YHR014W 876 nt1.52□□□□□ -2.17
BER1Q06688 TRX1YLR043C 312 nt1.52□□□□□ -2.17
BER1Q06688 YOR392WYOR392W 444 nt1.52□□□□□ -2.17
BER1Q06688 YBR224WYBR224W 516 nt1.52□□□□□ -2.17
BER1Q06688 TDA9YML081W 3756 nt1.52□□□□□ -2.17
BER1Q06688 KAR3YPR141C 2190 nt1.52□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 23 ms