Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 DBP6YNR038W 1890 nt3.05□□□□□ -1.92
YLR040CQ07988 ENA5YDR038C 3276 nt3.04□□□□□ -1.92
YLR040CQ07988 ENA2YDR039C 3276 nt3.04□□□□□ -1.92
YLR040CQ07988 ENA1YDR040C 3276 nt3.04□□□□□ -1.92
YLR040CQ07988 HPA3YEL066W 540 nt3.04□□□□□ -1.92
YLR040CQ07988 HSK3YKL138C-A 210 nt3.04□□□□□ -1.92
YLR040CQ07988 YKR033CYKR033C 426 nt3.04□□□□□ -1.92
YLR040CQ07988 HTB2YBL002W 396 nt3.04□□□□□ -1.92
YLR040CQ07988 MF(ALPHA)1YPL187W 498 nt3.04□□□□□ -1.92
YLR040CQ07988 YPR053CYPR053C 456 nt3.04□□□□□ -1.92
YLR040CQ07988 MSR1YHR091C 1932 nt3.03□□□□□ -1.92
YLR040CQ07988 YDL185C-AYDL185C-A 228 nt3.03□□□□□ -1.92
YLR040CQ07988 PAU10YDR542W 363 nt3.03□□□□□ -1.92
YLR040CQ07988 PAU11YGL261C 363 nt3.03□□□□□ -1.92
YLR040CQ07988 PAU4YLR461W 363 nt3.03□□□□□ -1.92
YLR040CQ07988 TCP1YDR212W 1680 nt3.03□□□□□ -1.92
YLR040CQ07988 PRP22YER013W 3438 nt3.03□□□□□ -1.92
YLR040CQ07988 CDH1YGL003C 1701 nt3.02□□□□□ -1.93
YLR040CQ07988 MAK21YDR060W 3078 nt3.02□□□□□ -1.93
YLR040CQ07988 REC8YPR007C 2043 nt3.02□□□□□ -1.93
YLR040CQ07988 MTC3YGL226W 372 nt3.02□□□□□ -1.93
YLR040CQ07988 YPL182CYPL182C 384 nt3.02□□□□□ -1.93
YLR040CQ07988 SWD3YBR175W 948 nt3.02□□□□□ -1.93
YLR040CQ07988 YSP2YDR326C 4317 nt3.02□□□□□ -1.93
YLR040CQ07988 VPS52YDR484W 1926 nt3.01□□□□□ -1.93
YLR040CQ07988 21S_rRNA21S_rRNA 3296 nt3.01□□□□□ -1.93
YLR040CQ07988 MDV1YJL112W 2145 nt3.01□□□□□ -1.93
YLR040CQ07988 VBA4YDR119W 2307 nt3.01□□□□□ -1.93
YLR040CQ07988 snR55snR55 98 nt3.01□□□□□ -1.93
YLR040CQ07988 YER039C-AYER039C-A 219 nt3.01□□□□□ -1.93
YLR040CQ07988 YIL102CYIL102C 306 nt3.01□□□□□ -1.93
YLR040CQ07988 RPL40AYIL148W 387 nt3.01□□□□□ -1.93
YLR040CQ07988 NCE101YJL205C 162 nt3.01□□□□□ -1.93
YLR040CQ07988 ESF2YNR054C 951 nt3.01□□□□□ -1.93
YLR040CQ07988 FUS1YCL027W 1539 nt3.01□□□□□ -1.93
YLR040CQ07988 CIN1YOR349W 3045 nt3.01□□□□□ -1.93
YLR040CQ07988 STT4YLR305C 5703 nt3.01□□□□□ -1.93
YLR040CQ07988 YIL082W-AYIL082W-A 4497 nt3.01□□□□□ -1.93
YLR040CQ07988 STN1YDR082W 1485 nt3.01□□□□□ -1.93
YLR040CQ07988 AIM9YER080W 1884 nt3.01□□□□□ -1.93
YLR040CQ07988 AKR1YDR264C 2295 nt3□□□□□ -1.93
YLR040CQ07988 VTC4YJL012C 2166 nt3□□□□□ -1.93
YLR040CQ07988 USE1YGL098W 738 nt3□□□□□ -1.93
YLR040CQ07988 YJL020W-AYJL020W-A 258 nt3□□□□□ -1.93
YLR040CQ07988 YMR230W-AYMR230W-A 189 nt3□□□□□ -1.93
YLR040CQ07988 GOT1YMR292W 417 nt3□□□□□ -1.93
YLR040CQ07988 RPL36BYPL249C-A 303 nt3□□□□□ -1.93
YLR040CQ07988 ATP15YPL271W 189 nt3□□□□□ -1.93
YLR040CQ07988 GIS4YML006C 2325 nt2.99□□□□□ -1.93
YLR040CQ07988 TRS65YGR166W 1683 nt2.99□□□□□ -1.93
YLR040CQ07988 PHO81YGR233C 3537 nt2.99□□□□□ -1.93
YLR040CQ07988 RPA190YOR341W 4995 nt2.99□□□□□ -1.93
YLR040CQ07988 COG8YML071C 1824 nt2.99□□□□□ -1.93
YLR040CQ07988 YDL041WYDL041W 354 nt2.99□□□□□ -1.93
YLR040CQ07988 YOR073W-AYOR073W-A 234 nt2.99□□□□□ -1.93
YLR040CQ07988 GYL1YMR192W 2163 nt2.99□□□□□ -1.93
YLR040CQ07988 NUP82YJL061W 2142 nt2.99□□□□□ -1.93
YLR040CQ07988 NPR2YEL062W 1848 nt2.98□□□□□ -1.93
YLR040CQ07988 YHL042WYHL042W 453 nt2.98□□□□□ -1.93
YLR040CQ07988 YIL032CYIL032C 357 nt2.98□□□□□ -1.93
YLR040CQ07988 YIL058WYIL058W 285 nt2.98□□□□□ -1.93
YLR040CQ07988 RPS18BYML026C 441 nt2.98□□□□□ -1.93
YLR040CQ07988 RSM19YNR037C 276 nt2.98□□□□□ -1.93
YLR040CQ07988 YPK1YKL126W 2043 nt2.98□□□□□ -1.93
YLR040CQ07988 YLL032CYLL032C 2478 nt2.98□□□□□ -1.93
YLR040CQ07988 CSR2YPR030W 3366 nt2.98□□□□□ -1.93
YLR040CQ07988 BNA4YBL098W 1383 nt2.98□□□□□ -1.93
YLR040CQ07988 MVP1YMR004W 1536 nt2.98□□□□□ -1.93
YLR040CQ07988 YNL034WYNL034W 1839 nt2.98□□□□□ -1.93
YLR040CQ07988 RIM20YOR275C 1986 nt2.98□□□□□ -1.93
YLR040CQ07988 REG1YDR028C 3045 nt2.98□□□□□ -1.93
YLR040CQ07988 LEU3YLR451W 2661 nt2.97□□□□□ -1.93
YLR040CQ07988 BIT61YJL058C 1632 nt2.97□□□□□ -1.93
YLR040CQ07988 YCG1YDR325W 3108 nt2.97□□□□□ -1.93
YLR040CQ07988 FMP32YFL046W 624 nt2.97□□□□□ -1.93
YLR040CQ07988 YLR342W-AYLR342W-A 174 nt2.97□□□□□ -1.93
YLR040CQ07988 YPR014CYPR014C 330 nt2.97□□□□□ -1.93
YLR040CQ07988 CIN8YEL061C 3003 nt2.97□□□□□ -1.93
YLR040CQ07988 POL2YNL262W 6669 nt2.97□□□□□ -1.93
YLR040CQ07988 MYO5YMR109W 3660 nt2.97□□□□□ -1.93
YLR040CQ07988 YHR080CYHR080C 4038 nt2.96□□□□□ -1.93
YLR040CQ07988 YAT2YER024W 2772 nt2.96□□□□□ -1.94
YLR040CQ07988 ECM5YMR176W 4236 nt2.96□□□□□ -1.94
YLR040CQ07988 snR85snR85 171 nt2.96□□□□□ -1.94
YLR040CQ07988 GPG1YGL121C 381 nt2.96□□□□□ -1.94
YLR040CQ07988 CCW14YLR390W-A 717 nt2.96□□□□□ -1.94
YLR040CQ07988 RPL32YBL092W 393 nt2.96□□□□□ -1.94
YLR040CQ07988 MSH2YOL090W 2895 nt2.95□□□□□ -1.94
YLR040CQ07988 HFM1YGL251C 3564 nt2.95□□□□□ -1.94
YLR040CQ07988 SMC2YFR031C 3513 nt2.95□□□□□ -1.94
YLR040CQ07988 snR79snR79 84 nt2.95□□□□□ -1.94
YLR040CQ07988 tC(GCA)BtC(GCA)B 72 nt2.95□□□□□ -1.94
YLR040CQ07988 tC(GCA)GtC(GCA)G 72 nt2.95□□□□□ -1.94
YLR040CQ07988 tC(GCA)P1tC(GCA)P1 72 nt2.95□□□□□ -1.94
YLR040CQ07988 tC(GCA)P2tC(GCA)P2 72 nt2.95□□□□□ -1.94
YLR040CQ07988 YGL052WYGL052W 306 nt2.95□□□□□ -1.94
YLR040CQ07988 YHL006W-AYHL006W-A 354 nt2.95□□□□□ -1.94
YLR040CQ07988 YIL020C-AYIL020C-A 339 nt2.95□□□□□ -1.94
YLR040CQ07988 SIP3YNL257C 3690 nt2.95□□□□□ -1.94
YLR040CQ07988 RIF1YBR275C 5751 nt2.95□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 21.9 ms