Protein–RNA interactions for Protein: P53081

NIF3, NGG1-interacting factor 3, yeastyeast

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIF3P53081 NAM7YMR080C 2916 nt1.64□□□□□ -2.15
NIF3P53081 RTP1YMR185W 2946 nt1.64□□□□□ -2.15
NIF3P53081 SOK2YMR016C 2358 nt1.64□□□□□ -2.15
NIF3P53081 CDC53YDL132W 2448 nt1.64□□□□□ -2.15
NIF3P53081 YDR341CYDR341C 1824 nt1.63□□□□□ -2.15
NIF3P53081 MYO2YOR326W 4725 nt1.63□□□□□ -2.15
NIF3P53081 AHC2YCR082W 387 nt1.63□□□□□ -2.15
NIF3P53081 BRP1YGL007W 378 nt1.63□□□□□ -2.15
NIF3P53081 MSL1YIR009W 336 nt1.63□□□□□ -2.15
NIF3P53081 PEP8YJL053W 1140 nt1.63□□□□□ -2.15
NIF3P53081 CSE4YKL049C 690 nt1.63□□□□□ -2.15
NIF3P53081 SYH1YPL105C 2550 nt1.63□□□□□ -2.15
NIF3P53081 RNH70YGR276C 1662 nt1.63□□□□□ -2.15
NIF3P53081 LHS1YKL073W 2646 nt1.63□□□□□ -2.15
NIF3P53081 NCL1YBL024W 2055 nt1.62□□□□□ -2.15
NIF3P53081 TMA20YER007C-A 546 nt1.62□□□□□ -2.15
NIF3P53081 SNO3YFL060C 669 nt1.62□□□□□ -2.15
NIF3P53081 NOP10YHR072W-A 177 nt1.62□□□□□ -2.15
NIF3P53081 SNC1YAL030W 354 nt1.62□□□□□ -2.15
NIF3P53081 YLR053CYLR053C 327 nt1.62□□□□□ -2.15
NIF3P53081 YBL029C-AYBL029C-A 285 nt1.62□□□□□ -2.15
NIF3P53081 YMR254CYMR254C 309 nt1.62□□□□□ -2.15
NIF3P53081 SNO2YNL334C 669 nt1.62□□□□□ -2.15
NIF3P53081 CSM4YPL200W 471 nt1.62□□□□□ -2.15
NIF3P53081 YNL144CYNL144C 2223 nt1.62□□□□□ -2.15
NIF3P53081 BRO1YPL084W 2535 nt1.62□□□□□ -2.15
NIF3P53081 MYO4YAL029C 4416 nt1.61□□□□□ -2.15
NIF3P53081 YDL025W-AYDL025W-A 105 nt1.61□□□□□ -2.15
NIF3P53081 snR9snR9 187 nt1.61□□□□□ -2.15
NIF3P53081 YDR461C-AYDR461C-A 243 nt1.61□□□□□ -2.15
NIF3P53081 YGR018CYGR018C 330 nt1.61□□□□□ -2.15
NIF3P53081 YGR228WYGR228W 345 nt1.61□□□□□ -2.15
NIF3P53081 TPM2YIL138C 486 nt1.61□□□□□ -2.15
NIF3P53081 YAP5YIR018W 738 nt1.61□□□□□ -2.15
NIF3P53081 TEN1YLR010C 483 nt1.61□□□□□ -2.15
NIF3P53081 YOL029CYOL029C 606 nt1.61□□□□□ -2.15
NIF3P53081 RRI2YOL117W 1938 nt1.61□□□□□ -2.15
NIF3P53081 VPS34YLR240W 2628 nt1.61□□□□□ -2.15
NIF3P53081 UBP1YDL122W 2430 nt1.6□□□□□ -2.15
NIF3P53081 YER038W-AYER038W-A 381 nt1.6□□□□□ -2.15
NIF3P53081 YGL014C-AYGL014C-A 162 nt1.6□□□□□ -2.15
NIF3P53081 SMD1YGR074W 441 nt1.6□□□□□ -2.15
NIF3P53081 YJR087WYJR087W 351 nt1.6□□□□□ -2.15
NIF3P53081 ARV1YLR242C 966 nt1.6□□□□□ -2.15
NIF3P53081 CCW14YLR390W-A 717 nt1.6□□□□□ -2.15
NIF3P53081 RPL36BYPL249C-A 303 nt1.6□□□□□ -2.15
NIF3P53081 YOR343W-BYOR343W-B 5313 nt1.6□□□□□ -2.15
NIF3P53081 GYP5YPL249C 2685 nt1.6□□□□□ -2.15
NIF3P53081 UTP21YLR409C 2820 nt1.59□□□□□ -2.15
NIF3P53081 BPH1YCR032W 6504 nt1.59□□□□□ -2.15
NIF3P53081 YCR087C-AYCR087C-A 462 nt1.59□□□□□ -2.15
NIF3P53081 PAU3YCR104W 375 nt1.59□□□□□ -2.15
NIF3P53081 YFR009W-AYFR009W-A 258 nt1.59□□□□□ -2.15
NIF3P53081 tT(UGU)HtT(UGU)H 72 nt1.59□□□□□ -2.15
NIF3P53081 YHC1YLR298C 696 nt1.59□□□□□ -2.15
NIF3P53081 YMR247W-AYMR247W-A 144 nt1.59□□□□□ -2.15
NIF3P53081 YOR105WYOR105W 327 nt1.59□□□□□ -2.15
NIF3P53081 BFA1YJR053W 1725 nt1.59□□□□□ -2.16
NIF3P53081 TFC8YPL007C 1767 nt1.59□□□□□ -2.16
NIF3P53081 PKH3YDR466W 2697 nt1.59□□□□□ -2.16
NIF3P53081 DPB11YJL090C 2295 nt1.59□□□□□ -2.16
NIF3P53081 VPS35YJL154C 2835 nt1.58□□□□□ -2.16
NIF3P53081 VPS15YBR097W 4365 nt1.58□□□□□ -2.16
NIF3P53081 SPO22YIL073C 2928 nt1.58□□□□□ -2.16
NIF3P53081 IRC10YOL015W 1761 nt1.58□□□□□ -2.16
NIF3P53081 YHR210CYHR210C 1026 nt1.58□□□□□ -2.16
NIF3P53081 BET4YJL031C 984 nt1.58□□□□□ -2.16
NIF3P53081 YJL127C-BYJL127C-B 159 nt1.58□□□□□ -2.16
NIF3P53081 PRP21YJL203W 843 nt1.58□□□□□ -2.16
NIF3P53081 ATP7YKL016C 525 nt1.58□□□□□ -2.16
NIF3P53081 YMR013C-AYMR013C-A 150 nt1.58□□□□□ -2.16
NIF3P53081 YCL007CYCL007C 393 nt1.58□□□□□ -2.16
NIF3P53081 PEA2YER149C 1263 nt1.57□□□□□ -2.16
NIF3P53081 HOP2YGL033W 657 nt1.57□□□□□ -2.16
NIF3P53081 CMS1YLR003C 876 nt1.57□□□□□ -2.16
NIF3P53081 GRX8YLR364W 330 nt1.57□□□□□ -2.16
NIF3P53081 YPL080CYPL080C 327 nt1.57□□□□□ -2.16
NIF3P53081 SAR1YPL218W 573 nt1.57□□□□□ -2.16
NIF3P53081 ATP15YPL271W 189 nt1.57□□□□□ -2.16
NIF3P53081 RPB5YBR154C 648 nt1.57□□□□□ -2.16
NIF3P53081 REF2YDR195W 1602 nt1.57□□□□□ -2.16
NIF3P53081 MMS22YLR320W 4365 nt1.57□□□□□ -2.16
NIF3P53081 SPE1YKL184W 1401 nt1.57□□□□□ -2.16
NIF3P53081 STB4YMR019W 2850 nt1.57□□□□□ -2.16
NIF3P53081 YPP1YGR198W 2454 nt1.56□□□□□ -2.16
NIF3P53081 YDL187CYDL187C 330 nt1.56□□□□□ -2.16
NIF3P53081 YDR286CYDR286C 345 nt1.56□□□□□ -2.16
NIF3P53081 SCEIQ0160 708 nt1.56□□□□□ -2.16
NIF3P53081 YMR052C-AYMR052C-A 366 nt1.56□□□□□ -2.16
NIF3P53081 ICY1YMR195W 384 nt1.56□□□□□ -2.16
NIF3P53081 YPL238CYPL238C 390 nt1.56□□□□□ -2.16
NIF3P53081 YJL016WYJL016W 1686 nt1.55□□□□□ -2.16
NIF3P53081 SPC72YAL047C 1869 nt1.55□□□□□ -2.16
NIF3P53081 EMP24YGL200C 612 nt1.55□□□□□ -2.16
NIF3P53081 RNR4YGR180C 1038 nt1.55□□□□□ -2.16
NIF3P53081 RPI1YIL119C 1224 nt1.55□□□□□ -2.16
NIF3P53081 RCN1YKL159C 636 nt1.55□□□□□ -2.16
NIF3P53081 YLR031WYLR031W 561 nt1.55□□□□□ -2.16
NIF3P53081 URA10YMR271C 684 nt1.55□□□□□ -2.16
NIF3P53081 RPB11YOL005C 363 nt1.55□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 38.3 ms