Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.57■■■□□ 2.64
CDK5RAP2Q96SN8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.57■■■□□ 2.64
CDK5RAP2Q96SN8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CDK5RAP2Q96SN8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CDK5RAP2Q96SN8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
CDK5RAP2Q96SN8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CDK5RAP2Q96SN8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CDK5RAP2Q96SN8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.53■■■□□ 2.64
CDK5RAP2Q96SN8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.53■■■□□ 2.64
CDK5RAP2Q96SN8 AC010864.1-201ENST00000609407 1511 ntBASIC31.51■■■□□ 2.64
CDK5RAP2Q96SN8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
CDK5RAP2Q96SN8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CDK5RAP2Q96SN8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CDK5RAP2Q96SN8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
CDK5RAP2Q96SN8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDK5RAP2Q96SN8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CDK5RAP2Q96SN8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.47■■■□□ 2.63
CDK5RAP2Q96SN8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.46■■■□□ 2.63
CDK5RAP2Q96SN8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
CDK5RAP2Q96SN8 CR559946.2-201ENST00000623684 991 ntBASIC31.46■■■□□ 2.63
CDK5RAP2Q96SN8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CDK5RAP2Q96SN8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CDK5RAP2Q96SN8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.45■■■□□ 2.63
CDK5RAP2Q96SN8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.45■■■□□ 2.63
CDK5RAP2Q96SN8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.44■■■□□ 2.62
CDK5RAP2Q96SN8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.44■■■□□ 2.62
CDK5RAP2Q96SN8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
CDK5RAP2Q96SN8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.43■■■□□ 2.62
CDK5RAP2Q96SN8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.42■■■□□ 2.62
CDK5RAP2Q96SN8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.42■■■□□ 2.62
CDK5RAP2Q96SN8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
CDK5RAP2Q96SN8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.41■■■□□ 2.62
CDK5RAP2Q96SN8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.41■■■□□ 2.62
CDK5RAP2Q96SN8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.41■■■□□ 2.62
CDK5RAP2Q96SN8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CDK5RAP2Q96SN8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CDK5RAP2Q96SN8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.39■■■□□ 2.62
CDK5RAP2Q96SN8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.39■■■□□ 2.62
CDK5RAP2Q96SN8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CDK5RAP2Q96SN8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CDK5RAP2Q96SN8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.38■■■□□ 2.61
CDK5RAP2Q96SN8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CDK5RAP2Q96SN8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CDK5RAP2Q96SN8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CDK5RAP2Q96SN8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.37■■■□□ 2.61
CDK5RAP2Q96SN8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.36■■■□□ 2.61
CDK5RAP2Q96SN8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.36■■■□□ 2.61
CDK5RAP2Q96SN8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CDK5RAP2Q96SN8 LINC00273-201ENST00000539813 1452 ntBASIC31.34■■■□□ 2.61
CDK5RAP2Q96SN8 AC016575.1-201ENST00000607026 382 ntBASIC31.34■■■□□ 2.61
CDK5RAP2Q96SN8 MIR3648-2-201ENST00000581792 180 ntBASIC31.33■■■□□ 2.61
CDK5RAP2Q96SN8 MIR3648-1-201ENST00000615959 180 ntBASIC31.33■■■□□ 2.61
CDK5RAP2Q96SN8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CDK5RAP2Q96SN8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.33■■■□□ 2.61
CDK5RAP2Q96SN8 LINC01971-201ENST00000617888 1048 ntBASIC31.32■■■□□ 2.6
CDK5RAP2Q96SN8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
CDK5RAP2Q96SN8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.31■■■□□ 2.6
CDK5RAP2Q96SN8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDK5RAP2Q96SN8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CDK5RAP2Q96SN8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDK5RAP2Q96SN8 DUX4L11-201ENST00000611504 1267 ntBASIC31.29■■■□□ 2.6
CDK5RAP2Q96SN8 DUX4L12-201ENST00000614593 1267 ntBASIC31.29■■■□□ 2.6
CDK5RAP2Q96SN8 DUX4L14-201ENST00000621227 1267 ntBASIC31.29■■■□□ 2.6
CDK5RAP2Q96SN8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDK5RAP2Q96SN8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CDK5RAP2Q96SN8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
CDK5RAP2Q96SN8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CDK5RAP2Q96SN8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDK5RAP2Q96SN8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDK5RAP2Q96SN8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.27■■■□□ 2.6
CDK5RAP2Q96SN8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CDK5RAP2Q96SN8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDK5RAP2Q96SN8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CDK5RAP2Q96SN8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDK5RAP2Q96SN8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDK5RAP2Q96SN8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
CDK5RAP2Q96SN8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.24■■■□□ 2.59
CDK5RAP2Q96SN8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDK5RAP2Q96SN8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.23■■■□□ 2.59
CDK5RAP2Q96SN8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
CDK5RAP2Q96SN8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.23■■■□□ 2.59
CDK5RAP2Q96SN8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.23■■■□□ 2.59
CDK5RAP2Q96SN8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.23■■■□□ 2.59
CDK5RAP2Q96SN8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
CDK5RAP2Q96SN8 AL135925.1-201ENST00000605920 1701 ntBASIC31.23■■■□□ 2.59
CDK5RAP2Q96SN8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDK5RAP2Q96SN8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDK5RAP2Q96SN8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDK5RAP2Q96SN8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.22■■■□□ 2.59
CDK5RAP2Q96SN8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
CDK5RAP2Q96SN8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CDK5RAP2Q96SN8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDK5RAP2Q96SN8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.2■■■□□ 2.58
CDK5RAP2Q96SN8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.58
CDK5RAP2Q96SN8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDK5RAP2Q96SN8 MIR4449-201ENST00000578365 66 ntBASIC31.18■■■□□ 2.58
CDK5RAP2Q96SN8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.18■■■□□ 2.58
CDK5RAP2Q96SN8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CDK5RAP2Q96SN8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CDK5RAP2Q96SN8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.16■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms