Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
VRK2Q86Y07 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.28■■□□□ 1.48
VRK2Q86Y07 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
VRK2Q86Y07 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
VRK2Q86Y07 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
VRK2Q86Y07 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
VRK2Q86Y07 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
VRK2Q86Y07 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
VRK2Q86Y07 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
VRK2Q86Y07 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
VRK2Q86Y07 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
VRK2Q86Y07 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.25■■□□□ 1.47
VRK2Q86Y07 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
VRK2Q86Y07 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
VRK2Q86Y07 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
VRK2Q86Y07 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
VRK2Q86Y07 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VRK2Q86Y07 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VRK2Q86Y07 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VRK2Q86Y07 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
VRK2Q86Y07 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
VRK2Q86Y07 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
VRK2Q86Y07 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.22■■□□□ 1.47
VRK2Q86Y07 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
VRK2Q86Y07 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VRK2Q86Y07 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
VRK2Q86Y07 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
VRK2Q86Y07 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
VRK2Q86Y07 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
VRK2Q86Y07 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.2■■□□□ 1.46
VRK2Q86Y07 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
VRK2Q86Y07 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.2■■□□□ 1.46
VRK2Q86Y07 AL139393.2-201ENST00000608721 2025 ntBASIC24.2■■□□□ 1.46
VRK2Q86Y07 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
VRK2Q86Y07 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
VRK2Q86Y07 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
VRK2Q86Y07 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
VRK2Q86Y07 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
VRK2Q86Y07 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VRK2Q86Y07 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VRK2Q86Y07 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.16■■□□□ 1.46
VRK2Q86Y07 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
VRK2Q86Y07 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
VRK2Q86Y07 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
VRK2Q86Y07 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
VRK2Q86Y07 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.14■■□□□ 1.45
VRK2Q86Y07 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
VRK2Q86Y07 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
VRK2Q86Y07 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
VRK2Q86Y07 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
VRK2Q86Y07 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
VRK2Q86Y07 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.12■■□□□ 1.45
VRK2Q86Y07 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
VRK2Q86Y07 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
VRK2Q86Y07 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
VRK2Q86Y07 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.1■■□□□ 1.45
VRK2Q86Y07 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.1■■□□□ 1.45
VRK2Q86Y07 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
VRK2Q86Y07 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
VRK2Q86Y07 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
VRK2Q86Y07 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
VRK2Q86Y07 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
VRK2Q86Y07 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
VRK2Q86Y07 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.44
VRK2Q86Y07 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
VRK2Q86Y07 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
VRK2Q86Y07 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.06■■□□□ 1.44
VRK2Q86Y07 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
VRK2Q86Y07 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
VRK2Q86Y07 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
VRK2Q86Y07 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
VRK2Q86Y07 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
VRK2Q86Y07 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
VRK2Q86Y07 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.04■■□□□ 1.44
VRK2Q86Y07 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.04■■□□□ 1.44
VRK2Q86Y07 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VRK2Q86Y07 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VRK2Q86Y07 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.03■■□□□ 1.44
VRK2Q86Y07 MIR762-201ENST00000390236 83 ntBASIC24.03■■□□□ 1.44
VRK2Q86Y07 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.03■■□□□ 1.44
VRK2Q86Y07 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
VRK2Q86Y07 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.03■■□□□ 1.44
VRK2Q86Y07 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
VRK2Q86Y07 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
VRK2Q86Y07 SUZ12P1-203ENST00000578195 985 ntBASIC24.02■■□□□ 1.44
VRK2Q86Y07 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
VRK2Q86Y07 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
VRK2Q86Y07 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VRK2Q86Y07 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.01■■□□□ 1.43
VRK2Q86Y07 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.01■■□□□ 1.43
VRK2Q86Y07 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
VRK2Q86Y07 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24■■□□□ 1.43
VRK2Q86Y07 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.99■■□□□ 1.43
VRK2Q86Y07 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
VRK2Q86Y07 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.98■■□□□ 1.43
VRK2Q86Y07 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.98■■□□□ 1.43
VRK2Q86Y07 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
VRK2Q86Y07 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
VRK2Q86Y07 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VRK2Q86Y07 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms