Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM53AQ6NSI3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM53AQ6NSI3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
FAM53AQ6NSI3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FAM53AQ6NSI3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FAM53AQ6NSI3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM53AQ6NSI3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM53AQ6NSI3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM53AQ6NSI3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM53AQ6NSI3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM53AQ6NSI3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.72■■□□□ 1.07
FAM53AQ6NSI3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FAM53AQ6NSI3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.7■■□□□ 1.06
FAM53AQ6NSI3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FAM53AQ6NSI3 AC010864.1-201ENST00000609407 1511 ntBASIC21.7■■□□□ 1.06
FAM53AQ6NSI3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FAM53AQ6NSI3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FAM53AQ6NSI3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
FAM53AQ6NSI3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.66■■□□□ 1.06
FAM53AQ6NSI3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FAM53AQ6NSI3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.66■■□□□ 1.06
FAM53AQ6NSI3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
FAM53AQ6NSI3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.65■■□□□ 1.06
FAM53AQ6NSI3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM53AQ6NSI3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.65■■□□□ 1.06
FAM53AQ6NSI3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FAM53AQ6NSI3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM53AQ6NSI3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FAM53AQ6NSI3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.64■■□□□ 1.05
FAM53AQ6NSI3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FAM53AQ6NSI3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
FAM53AQ6NSI3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FAM53AQ6NSI3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FAM53AQ6NSI3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FAM53AQ6NSI3 SUZ12P1-203ENST00000578195 985 ntBASIC21.63■■□□□ 1.05
FAM53AQ6NSI3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FAM53AQ6NSI3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FAM53AQ6NSI3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.62■■□□□ 1.05
FAM53AQ6NSI3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FAM53AQ6NSI3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.62■■□□□ 1.05
FAM53AQ6NSI3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
FAM53AQ6NSI3 AL139393.2-201ENST00000608721 2025 ntBASIC21.61■■□□□ 1.05
FAM53AQ6NSI3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
FAM53AQ6NSI3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FAM53AQ6NSI3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FAM53AQ6NSI3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FAM53AQ6NSI3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FAM53AQ6NSI3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
FAM53AQ6NSI3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
FAM53AQ6NSI3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FAM53AQ6NSI3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FAM53AQ6NSI3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
FAM53AQ6NSI3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FAM53AQ6NSI3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.59■■□□□ 1.05
FAM53AQ6NSI3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
FAM53AQ6NSI3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FAM53AQ6NSI3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FAM53AQ6NSI3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
FAM53AQ6NSI3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
FAM53AQ6NSI3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
FAM53AQ6NSI3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
FAM53AQ6NSI3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
FAM53AQ6NSI3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FAM53AQ6NSI3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FAM53AQ6NSI3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FAM53AQ6NSI3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FAM53AQ6NSI3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FAM53AQ6NSI3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FAM53AQ6NSI3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FAM53AQ6NSI3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
FAM53AQ6NSI3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.54■■□□□ 1.04
FAM53AQ6NSI3 MIR762-201ENST00000390236 83 ntBASIC21.54■■□□□ 1.04
FAM53AQ6NSI3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.54■■□□□ 1.04
FAM53AQ6NSI3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
FAM53AQ6NSI3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
FAM53AQ6NSI3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
FAM53AQ6NSI3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.53■■□□□ 1.04
FAM53AQ6NSI3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FAM53AQ6NSI3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FAM53AQ6NSI3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.52■■□□□ 1.04
FAM53AQ6NSI3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
FAM53AQ6NSI3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FAM53AQ6NSI3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.51■■□□□ 1.03
FAM53AQ6NSI3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FAM53AQ6NSI3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
FAM53AQ6NSI3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.5■■□□□ 1.03
FAM53AQ6NSI3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
FAM53AQ6NSI3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
FAM53AQ6NSI3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FAM53AQ6NSI3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FAM53AQ6NSI3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FAM53AQ6NSI3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.49■■□□□ 1.03
FAM53AQ6NSI3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FAM53AQ6NSI3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
FAM53AQ6NSI3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FAM53AQ6NSI3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
FAM53AQ6NSI3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FAM53AQ6NSI3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FAM53AQ6NSI3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FAM53AQ6NSI3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms