Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 YKL133CYKL133C 1392 nt6.21□□□□□ -1.41
SMD1Q02260 ASP3-1YLR155C 1089 nt6.21□□□□□ -1.42
SMD1Q02260 ASP3-2YLR157C 1089 nt6.21□□□□□ -1.42
SMD1Q02260 ASP3-3YLR158C 1089 nt6.21□□□□□ -1.42
SMD1Q02260 ASP3-4YLR160C 1089 nt6.21□□□□□ -1.42
SMD1Q02260 YMR226CYMR226C 804 nt6.21□□□□□ -1.42
SMD1Q02260 RPT5YOR117W 1305 nt6.21□□□□□ -1.42
SMD1Q02260 YHR219WYHR219W 1875 nt6.2□□□□□ -1.42
SMD1Q02260 PRY1YJL079C 900 nt6.2□□□□□ -1.42
SMD1Q02260 YLR046CYLR046C 813 nt6.2□□□□□ -1.42
SMD1Q02260 SMM1YNR015W 1155 nt6.2□□□□□ -1.42
SMD1Q02260 YOR072WYOR072W 315 nt6.2□□□□□ -1.42
SMD1Q02260 DLD3YEL071W 1491 nt6.2□□□□□ -1.42
SMD1Q02260 AIM1YAL046C 357 nt6.19□□□□□ -1.42
SMD1Q02260 MRS6YOR370C 1812 nt6.19□□□□□ -1.42
SMD1Q02260 RPD3YNL330C 1302 nt6.19□□□□□ -1.42
SMD1Q02260 YDR306CYDR306C 1437 nt6.18□□□□□ -1.42
SMD1Q02260 SOL2YCR073W-A 948 nt6.18□□□□□ -1.42
SMD1Q02260 YLR111WYLR111W 333 nt6.18□□□□□ -1.42
SMD1Q02260 NME1NME1 340 nt6.18□□□□□ -1.42
SMD1Q02260 OYE2YHR179W 1203 nt6.17□□□□□ -1.42
SMD1Q02260 HXT12YIL170W 1374 nt6.17□□□□□ -1.42
SMD1Q02260 TAT2YOL020W 1779 nt6.16□□□□□ -1.42
SMD1Q02260 EAF3YPR023C 1206 nt6.16□□□□□ -1.42
SMD1Q02260 YEL023CYEL023C 2049 nt6.16□□□□□ -1.42
SMD1Q02260 SAM3YPL274W 1764 nt6.16□□□□□ -1.42
SMD1Q02260 GLR1YPL091W 1452 nt6.15□□□□□ -1.42
SMD1Q02260 TIM44YIL022W 1296 nt6.15□□□□□ -1.42
SMD1Q02260 VMA11YPL234C 495 nt6.15□□□□□ -1.42
SMD1Q02260 PCP1YGR101W 1041 nt6.14□□□□□ -1.43
SMD1Q02260 YJL118WYJL118W 660 nt6.14□□□□□ -1.43
SMD1Q02260 YLR437C-AYLR437C-A 228 nt6.14□□□□□ -1.43
SMD1Q02260 YMR262WYMR262W 942 nt6.14□□□□□ -1.43
SMD1Q02260 LSR1LSR1 1175 nt6.14□□□□□ -1.43
SMD1Q02260 RRT8YOL048C 1029 nt6.14□□□□□ -1.43
SMD1Q02260 RIB7YBR153W 735 nt6.14□□□□□ -1.43
SMD1Q02260 LOT5YKL183W 921 nt6.12□□□□□ -1.43
SMD1Q02260 LSB3YFR024C-A 1380 nt6.11□□□□□ -1.43
SMD1Q02260 UFD1YGR048W 1086 nt6.11□□□□□ -1.43
SMD1Q02260 MEX67YPL169C 1800 nt6.11□□□□□ -1.43
SMD1Q02260 HXT10YFL011W 1641 nt6.1□□□□□ -1.43
SMD1Q02260 RIM2YBR192W 1134 nt6.1□□□□□ -1.43
SMD1Q02260 VRG4YGL225W 1014 nt6.09□□□□□ -1.43
SMD1Q02260 RPC31YNL151C 756 nt6.09□□□□□ -1.43
SMD1Q02260 Q0010Q0010 387 nt6.09□□□□□ -1.43
SMD1Q02260 TPS1YBR126C 1488 nt6.09□□□□□ -1.44
SMD1Q02260 ITR2YOL103W 1830 nt6.09□□□□□ -1.44
SMD1Q02260 INH1YDL181W 258 nt6.08□□□□□ -1.44
SMD1Q02260 YDR455CYDR455C 309 nt6.08□□□□□ -1.44
SMD1Q02260 YPI1YFR003C 468 nt6.08□□□□□ -1.44
SMD1Q02260 TMA23YMR269W 636 nt6.08□□□□□ -1.44
SMD1Q02260 SNX3YOR357C 489 nt6.08□□□□□ -1.44
SMD1Q02260 ERG13YML126C 1476 nt6.08□□□□□ -1.44
SMD1Q02260 AGP3YFL055W 1677 nt6.07□□□□□ -1.44
SMD1Q02260 STF1YDL130W-A 261 nt6.07□□□□□ -1.44
SMD1Q02260 CAB5YDR196C 726 nt6.07□□□□□ -1.44
SMD1Q02260 YJR154WYJR154W 1041 nt6.07□□□□□ -1.44
SMD1Q02260 SAC7YDR389W 1965 nt6.06□□□□□ -1.44
SMD1Q02260 RPN14YGL004C 1254 nt6.06□□□□□ -1.44
SMD1Q02260 IMO32YGR031W 1029 nt6.06□□□□□ -1.44
SMD1Q02260 NBA1YOL070C 1506 nt6.05□□□□□ -1.44
SMD1Q02260 LSM5YER146W 282 nt6.05□□□□□ -1.44
SMD1Q02260 TIP1YBR067C 633 nt6.05□□□□□ -1.44
SMD1Q02260 DPL1YDR294C 1770 nt6.05□□□□□ -1.44
SMD1Q02260 GUT1YHL032C 2130 nt6.05□□□□□ -1.44
SMD1Q02260 GAL3YDR009W 1563 nt6.05□□□□□ -1.44
SMD1Q02260 YMR265CYMR265C 1386 nt6.04□□□□□ -1.44
SMD1Q02260 NDE1YMR145C 1683 nt6.04□□□□□ -1.44
SMD1Q02260 YJL045WYJL045W 1905 nt6.03□□□□□ -1.44
SMD1Q02260 YJL055WYJL055W 738 nt6.02□□□□□ -1.45
SMD1Q02260 YMR244WYMR244W 1068 nt6.02□□□□□ -1.45
SMD1Q02260 KEL3YPL263C 1956 nt6.01□□□□□ -1.45
SMD1Q02260 DDI1YER143W 1287 nt6.01□□□□□ -1.45
SMD1Q02260 YJR114WYJR114W 393 nt6.01□□□□□ -1.45
SMD1Q02260 HAP5YOR358W 729 nt6.01□□□□□ -1.45
SMD1Q02260 MET30YIL046W 1923 nt6.01□□□□□ -1.45
SMD1Q02260 DAK2YFL053W 1776 nt6.01□□□□□ -1.45
SMD1Q02260 YNR064CYNR064C 873 nt6□□□□□ -1.45
SMD1Q02260 snR31snR31 225 nt6□□□□□ -1.45
SMD1Q02260 CCR4YAL021C 2514 nt6□□□□□ -1.45
SMD1Q02260 PUS7YOR243C 2031 nt5.99□□□□□ -1.45
SMD1Q02260 FIT1YDR534C 1587 nt5.99□□□□□ -1.45
SMD1Q02260 LEU4YNL104C 1860 nt5.98□□□□□ -1.45
SMD1Q02260 SUV3YPL029W 2214 nt5.98□□□□□ -1.45
SMD1Q02260 TVP23YDR084C 600 nt5.98□□□□□ -1.45
SMD1Q02260 YNL190WYNL190W 615 nt5.98□□□□□ -1.45
SMD1Q02260 RIB2YOL066C 1776 nt5.98□□□□□ -1.45
SMD1Q02260 YNR029CYNR029C 1290 nt5.97□□□□□ -1.45
SMD1Q02260 ADE8YDR408C 645 nt5.96□□□□□ -1.46
SMD1Q02260 RBG2YGR173W 1107 nt5.96□□□□□ -1.46
SMD1Q02260 BEM1YBR200W 1656 nt5.95□□□□□ -1.46
SMD1Q02260 FRT1YOR324C 1809 nt5.95□□□□□ -1.46
SMD1Q02260 OPI3YJR073C 621 nt5.94□□□□□ -1.46
SMD1Q02260 IML3YBR107C 738 nt5.94□□□□□ -1.46
SMD1Q02260 PMA2YPL036W 2844 nt5.94□□□□□ -1.46
SMD1Q02260 tE(CUC)DtE(CUC)D 72 nt5.93□□□□□ -1.46
SMD1Q02260 tE(CUC)ItE(CUC)I 72 nt5.93□□□□□ -1.46
SMD1Q02260 ELO1YJL196C 933 nt5.93□□□□□ -1.46
SMD1Q02260 ADH1YOL086C 1047 nt5.93□□□□□ -1.46
SMD1Q02260 YPR126CYPR126C 309 nt5.93□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 44.4 ms