Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RAB5BP61020 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAB5BP61020 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB5BP61020 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB5BP61020 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
RAB5BP61020 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB5BP61020 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB5BP61020 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB5BP61020 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RAB5BP61020 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RAB5BP61020 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RAB5BP61020 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB5BP61020 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB5BP61020 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RAB5BP61020 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB5BP61020 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB5BP61020 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB5BP61020 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB5BP61020 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB5BP61020 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB5BP61020 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.76■□□□□ 0.91
RAB5BP61020 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB5BP61020 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB5BP61020 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RAB5BP61020 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB5BP61020 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB5BP61020 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB5BP61020 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB5BP61020 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB5BP61020 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
RAB5BP61020 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB5BP61020 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB5BP61020 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB5BP61020 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB5BP61020 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB5BP61020 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB5BP61020 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RAB5BP61020 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB5BP61020 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB5BP61020 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB5BP61020 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RAB5BP61020 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB5BP61020 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB5BP61020 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RAB5BP61020 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB5BP61020 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB5BP61020 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB5BP61020 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB5BP61020 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB5BP61020 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB5BP61020 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RAB5BP61020 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB5BP61020 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RAB5BP61020 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB5BP61020 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAB5BP61020 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RAB5BP61020 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB5BP61020 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB5BP61020 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB5BP61020 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB5BP61020 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB5BP61020 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RAB5BP61020 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.64■□□□□ 0.89
RAB5BP61020 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RAB5BP61020 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB5BP61020 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB5BP61020 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB5BP61020 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB5BP61020 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB5BP61020 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB5BP61020 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RAB5BP61020 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB5BP61020 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.62■□□□□ 0.89
RAB5BP61020 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB5BP61020 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB5BP61020 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.61■□□□□ 0.89
RAB5BP61020 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB5BP61020 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAB5BP61020 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.6■□□□□ 0.89
RAB5BP61020 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB5BP61020 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RAB5BP61020 AL449106.1-201ENST00000608517 1980 ntBASIC20.6■□□□□ 0.89
RAB5BP61020 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RAB5BP61020 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAB5BP61020 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RAB5BP61020 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB5BP61020 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB5BP61020 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.58■□□□□ 0.89
RAB5BP61020 AC120057.4-201ENST00000624722 1615 ntBASIC20.58■□□□□ 0.89
RAB5BP61020 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
RAB5BP61020 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB5BP61020 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB5BP61020 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.57■□□□□ 0.88
RAB5BP61020 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB5BP61020 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB5BP61020 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.57■□□□□ 0.88
RAB5BP61020 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB5BP61020 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB5BP61020 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB5BP61020 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms