Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 MDL2YPL270W 2322 nt9.81□□□□□ -0.84
MSH3P25336 MRS6YOR370C 1812 nt9.81□□□□□ -0.84
MSH3P25336 YHR219WYHR219W 1875 nt9.81□□□□□ -0.84
MSH3P25336 ASP3-1YLR155C 1089 nt9.8□□□□□ -0.84
MSH3P25336 ASP3-2YLR157C 1089 nt9.8□□□□□ -0.84
MSH3P25336 ASP3-3YLR158C 1089 nt9.8□□□□□ -0.84
MSH3P25336 ASP3-4YLR160C 1089 nt9.8□□□□□ -0.84
MSH3P25336 RIB2YOL066C 1776 nt9.8□□□□□ -0.84
MSH3P25336 GAL3YDR009W 1563 nt9.8□□□□□ -0.84
MSH3P25336 YKL133CYKL133C 1392 nt9.78□□□□□ -0.84
MSH3P25336 YHR218WYHR218W 1812 nt9.78□□□□□ -0.84
MSH3P25336 ENT4YLL038C 744 nt9.78□□□□□ -0.84
MSH3P25336 YNR029CYNR029C 1290 nt9.78□□□□□ -0.84
MSH3P25336 SSL2YIL143C 2532 nt9.77□□□□□ -0.85
MSH3P25336 DLD3YEL071W 1491 nt9.76□□□□□ -0.85
MSH3P25336 YLR046CYLR046C 813 nt9.75□□□□□ -0.85
MSH3P25336 TMA23YMR269W 636 nt9.75□□□□□ -0.85
MSH3P25336 RIB7YBR153W 735 nt9.75□□□□□ -0.85
MSH3P25336 DDI1YER143W 1287 nt9.74□□□□□ -0.85
MSH3P25336 LSM5YER146W 282 nt9.74□□□□□ -0.85
MSH3P25336 YOR072WYOR072W 315 nt9.74□□□□□ -0.85
MSH3P25336 ODC1YPL134C 933 nt9.74□□□□□ -0.85
MSH3P25336 ADH1YOL086C 1047 nt9.73□□□□□ -0.85
MSH3P25336 ERG13YML126C 1476 nt9.72□□□□□ -0.85
MSH3P25336 PCP1YGR101W 1041 nt9.72□□□□□ -0.85
MSH3P25336 ITR2YOL103W 1830 nt9.7□□□□□ -0.86
MSH3P25336 CWP2YKL096W-A 279 nt9.7□□□□□ -0.86
MSH3P25336 SAC7YDR389W 1965 nt9.7□□□□□ -0.86
MSH3P25336 IMO32YGR031W 1029 nt9.69□□□□□ -0.86
MSH3P25336 RRT8YOL048C 1029 nt9.69□□□□□ -0.86
MSH3P25336 ALR1YOL130W 2580 nt9.69□□□□□ -0.86
MSH3P25336 LSR1LSR1 1175 nt9.68□□□□□ -0.86
MSH3P25336 MEX67YPL169C 1800 nt9.68□□□□□ -0.86
MSH3P25336 PAB1YER165W 1734 nt9.67□□□□□ -0.86
MSH3P25336 ARA2YMR041C 1008 nt9.66□□□□□ -0.86
MSH3P25336 RPD3YNL330C 1302 nt9.64□□□□□ -0.87
MSH3P25336 YLR122CYLR122C 378 nt9.64□□□□□ -0.87
MSH3P25336 TPN1YGL186C 1740 nt9.64□□□□□ -0.87
MSH3P25336 DAK2YFL053W 1776 nt9.63□□□□□ -0.87
MSH3P25336 MDM35YKL053C-A 261 nt9.62□□□□□ -0.87
MSH3P25336 LCP5YER127W 1074 nt9.61□□□□□ -0.87
MSH3P25336 PAM17YKR065C 594 nt9.61□□□□□ -0.87
MSH3P25336 VMA11YPL234C 495 nt9.61□□□□□ -0.87
MSH3P25336 SNZ1YMR096W 894 nt9.6□□□□□ -0.87
MSH3P25336 URH1YDR400W 1023 nt9.59□□□□□ -0.87
MSH3P25336 YFR036W-AYFR036W-A 651 nt9.57□□□□□ -0.88
MSH3P25336 TIM44YIL022W 1296 nt9.57□□□□□ -0.88
MSH3P25336 YPR126CYPR126C 309 nt9.57□□□□□ -0.88
MSH3P25336 CCT5YJR064W 1689 nt9.57□□□□□ -0.88
MSH3P25336 YJR114WYJR114W 393 nt9.56□□□□□ -0.88
MSH3P25336 TOM71YHR117W 1920 nt9.56□□□□□ -0.88
MSH3P25336 ADE8YDR408C 645 nt9.55□□□□□ -0.88
MSH3P25336 TIP1YBR067C 633 nt9.55□□□□□ -0.88
MSH3P25336 LPD1YFL018C 1500 nt9.55□□□□□ -0.88
MSH3P25336 YJL195CYJL195C 702 nt9.54□□□□□ -0.88
MSH3P25336 OPI3YJR073C 621 nt9.54□□□□□ -0.88
MSH3P25336 SNX3YOR357C 489 nt9.54□□□□□ -0.88
MSH3P25336 SFL1YOR140W 2301 nt9.54□□□□□ -0.88
MSH3P25336 KRR1YCL059C 951 nt9.53□□□□□ -0.88
MSH3P25336 UFD1YGR048W 1086 nt9.53□□□□□ -0.88
MSH3P25336 YMR262WYMR262W 942 nt9.53□□□□□ -0.88
MSH3P25336 YNR064CYNR064C 873 nt9.53□□□□□ -0.88
MSH3P25336 YRF1-2YER190W 5046 nt9.53□□□□□ -0.88
MSH3P25336 FRA1YLL029W 2250 nt9.52□□□□□ -0.89
MSH3P25336 DPL1YDR294C 1770 nt9.52□□□□□ -0.89
MSH3P25336 TVP23YDR084C 600 nt9.51□□□□□ -0.89
MSH3P25336 ELO1YJL196C 933 nt9.51□□□□□ -0.89
MSH3P25336 RPC31YNL151C 756 nt9.51□□□□□ -0.89
MSH3P25336 RIM2YBR192W 1134 nt9.51□□□□□ -0.89
MSH3P25336 HXT10YFL011W 1641 nt9.51□□□□□ -0.89
MSH3P25336 SUV3YPL029W 2214 nt9.51□□□□□ -0.89
MSH3P25336 YMR265CYMR265C 1386 nt9.5□□□□□ -0.89
MSH3P25336 TOM20YGR082W 552 nt9.5□□□□□ -0.89
MSH3P25336 AI5_BETAQ0075 1065 nt9.48□□□□□ -0.89
MSH3P25336 IML3YBR107C 738 nt9.48□□□□□ -0.89
MSH3P25336 KEL3YPL263C 1956 nt9.48□□□□□ -0.89
MSH3P25336 CTI6YPL181W 1521 nt9.47□□□□□ -0.89
MSH3P25336 HEM14YER014W 1620 nt9.47□□□□□ -0.89
MSH3P25336 SPS100YHR139C 981 nt9.47□□□□□ -0.89
MSH3P25336 FUN14YAL008W 597 nt9.47□□□□□ -0.89
MSH3P25336 FIT1YDR534C 1587 nt9.46□□□□□ -0.89
MSH3P25336 ABZ2YMR289W 1125 nt9.46□□□□□ -0.9
MSH3P25336 HAP5YOR358W 729 nt9.46□□□□□ -0.9
MSH3P25336 NBA1YOL070C 1506 nt9.44□□□□□ -0.9
MSH3P25336 AGP3YFL055W 1677 nt9.43□□□□□ -0.9
MSH3P25336 YEL008WYEL008W 381 nt9.43□□□□□ -0.9
MSH3P25336 RPN14YGL004C 1254 nt9.42□□□□□ -0.9
MSH3P25336 SWT21YNL187W 1074 nt9.41□□□□□ -0.9
MSH3P25336 MHF1YOL086W-A 273 nt9.41□□□□□ -0.9
MSH3P25336 LEU4YNL104C 1860 nt9.4□□□□□ -0.91
MSH3P25336 CRC1YOR100C 984 nt9.39□□□□□ -0.91
MSH3P25336 MET1YKR069W 1782 nt9.38□□□□□ -0.91
MSH3P25336 STE4YOR212W 1272 nt9.38□□□□□ -0.91
MSH3P25336 COG1YGL223C 1254 nt9.37□□□□□ -0.91
MSH3P25336 snR31snR31 225 nt9.36□□□□□ -0.91
MSH3P25336 YPL041CYPL041C 624 nt9.35□□□□□ -0.91
MSH3P25336 INH1YDL181W 258 nt9.34□□□□□ -0.91
MSH3P25336 YDR510C-AYDR510C-A 117 nt9.34□□□□□ -0.91
MSH3P25336 AMF1YOR378W 1548 nt9.34□□□□□ -0.91
MSH3P25336 DUR3YHL016C 2208 nt9.32□□□□□ -0.92
Retrieved 100 of 7,029 protein–RNA pairs in 30.7 ms