Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.82■■■□□ 2.36
GGPS1O95749 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
GGPS1O95749 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
GGPS1O95749 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
GGPS1O95749 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
GGPS1O95749 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.8■■■□□ 2.36
GGPS1O95749 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.8■■■□□ 2.36
GGPS1O95749 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
GGPS1O95749 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.79■■■□□ 2.36
GGPS1O95749 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
GGPS1O95749 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
GGPS1O95749 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
GGPS1O95749 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.75■■■□□ 2.35
GGPS1O95749 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
GGPS1O95749 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.74■■■□□ 2.35
GGPS1O95749 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.74■■■□□ 2.35
GGPS1O95749 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
GGPS1O95749 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
GGPS1O95749 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.71■■■□□ 2.35
GGPS1O95749 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.71■■■□□ 2.35
GGPS1O95749 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
GGPS1O95749 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.69■■■□□ 2.34
GGPS1O95749 LINC01971-201ENST00000617888 1048 ntBASIC29.69■■■□□ 2.34
GGPS1O95749 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
GGPS1O95749 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.69■■■□□ 2.34
GGPS1O95749 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.69■■■□□ 2.34
GGPS1O95749 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
GGPS1O95749 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.68■■■□□ 2.34
GGPS1O95749 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
GGPS1O95749 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
GGPS1O95749 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
GGPS1O95749 DUX4L11-201ENST00000611504 1267 ntBASIC29.66■■■□□ 2.34
GGPS1O95749 DUX4L12-201ENST00000614593 1267 ntBASIC29.66■■■□□ 2.34
GGPS1O95749 DUX4L14-201ENST00000621227 1267 ntBASIC29.66■■■□□ 2.34
GGPS1O95749 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
GGPS1O95749 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
GGPS1O95749 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
GGPS1O95749 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.64■■■□□ 2.34
GGPS1O95749 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.64■■■□□ 2.34
GGPS1O95749 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.64■■■□□ 2.33
GGPS1O95749 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
GGPS1O95749 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.62■■■□□ 2.33
GGPS1O95749 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.62■■■□□ 2.33
GGPS1O95749 MIR3648-2-201ENST00000581792 180 ntBASIC29.62■■■□□ 2.33
GGPS1O95749 MIR3648-1-201ENST00000615959 180 ntBASIC29.62■■■□□ 2.33
GGPS1O95749 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29.61■■■□□ 2.33
GGPS1O95749 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
GGPS1O95749 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.61■■■□□ 2.33
GGPS1O95749 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
GGPS1O95749 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
GGPS1O95749 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.6■■■□□ 2.33
GGPS1O95749 AC016575.1-201ENST00000607026 382 ntBASIC29.6■■■□□ 2.33
GGPS1O95749 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.59■■■□□ 2.33
GGPS1O95749 MIR639-201ENST00000384974 98 ntBASIC29.58■■■□□ 2.33
GGPS1O95749 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.58■■■□□ 2.33
GGPS1O95749 AC010864.1-201ENST00000609407 1511 ntBASIC29.58■■■□□ 2.33
GGPS1O95749 CR559946.2-201ENST00000623684 991 ntBASIC29.57■■■□□ 2.32
GGPS1O95749 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
GGPS1O95749 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
GGPS1O95749 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
GGPS1O95749 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
GGPS1O95749 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.56■■■□□ 2.32
GGPS1O95749 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.56■■■□□ 2.32
GGPS1O95749 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.55■■■□□ 2.32
GGPS1O95749 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.54■■■□□ 2.32
GGPS1O95749 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.54■■■□□ 2.32
GGPS1O95749 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
GGPS1O95749 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
GGPS1O95749 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.53■■■□□ 2.32
GGPS1O95749 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
GGPS1O95749 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
GGPS1O95749 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
GGPS1O95749 MIR4449-201ENST00000578365 66 ntBASIC29.52■■■□□ 2.32
GGPS1O95749 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.5■■■□□ 2.31
GGPS1O95749 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.5■■■□□ 2.31
GGPS1O95749 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.5■■■□□ 2.31
GGPS1O95749 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.49■■■□□ 2.31
GGPS1O95749 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
GGPS1O95749 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
GGPS1O95749 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
GGPS1O95749 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
GGPS1O95749 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
GGPS1O95749 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.48■■■□□ 2.31
GGPS1O95749 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
GGPS1O95749 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
GGPS1O95749 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
GGPS1O95749 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
GGPS1O95749 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
GGPS1O95749 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
GGPS1O95749 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
GGPS1O95749 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.31
GGPS1O95749 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.45■■■□□ 2.3
GGPS1O95749 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
GGPS1O95749 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
GGPS1O95749 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
GGPS1O95749 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
GGPS1O95749 DUX4L13-201ENST00000554103 1267 ntBASIC29.44■■■□□ 2.3
GGPS1O95749 DUX4L15-201ENST00000611059 1267 ntBASIC29.44■■■□□ 2.3
GGPS1O95749 DUX4L23-201ENST00000615195 1269 ntBASIC29.44■■■□□ 2.3
GGPS1O95749 DUX4L24-201ENST00000617576 1269 ntBASIC29.44■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 982.6 ms