Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PFDN1O60925 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.8■■□□□ 1.4
PFDN1O60925 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PFDN1O60925 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PFDN1O60925 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PFDN1O60925 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
PFDN1O60925 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PFDN1O60925 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.78■■□□□ 1.4
PFDN1O60925 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PFDN1O60925 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PFDN1O60925 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PFDN1O60925 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PFDN1O60925 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PFDN1O60925 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PFDN1O60925 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
PFDN1O60925 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PFDN1O60925 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.75■■□□□ 1.39
PFDN1O60925 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PFDN1O60925 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.75■■□□□ 1.39
PFDN1O60925 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PFDN1O60925 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
PFDN1O60925 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PFDN1O60925 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
PFDN1O60925 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.73■■□□□ 1.39
PFDN1O60925 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.73■■□□□ 1.39
PFDN1O60925 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PFDN1O60925 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PFDN1O60925 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.72■■□□□ 1.39
PFDN1O60925 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PFDN1O60925 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PFDN1O60925 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PFDN1O60925 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PFDN1O60925 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PFDN1O60925 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
PFDN1O60925 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PFDN1O60925 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PFDN1O60925 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.68■■□□□ 1.38
PFDN1O60925 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PFDN1O60925 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PFDN1O60925 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PFDN1O60925 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PFDN1O60925 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.66■■□□□ 1.38
PFDN1O60925 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PFDN1O60925 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PFDN1O60925 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.66■■□□□ 1.38
PFDN1O60925 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PFDN1O60925 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.66■■□□□ 1.38
PFDN1O60925 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PFDN1O60925 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PFDN1O60925 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
PFDN1O60925 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PFDN1O60925 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PFDN1O60925 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
PFDN1O60925 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PFDN1O60925 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
PFDN1O60925 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PFDN1O60925 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PFDN1O60925 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PFDN1O60925 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PFDN1O60925 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
PFDN1O60925 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.62■■□□□ 1.37
PFDN1O60925 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PFDN1O60925 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PFDN1O60925 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PFDN1O60925 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PFDN1O60925 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PFDN1O60925 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PFDN1O60925 AL449106.1-201ENST00000608517 1980 ntBASIC23.59■■□□□ 1.37
PFDN1O60925 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PFDN1O60925 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PFDN1O60925 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
PFDN1O60925 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.58■■□□□ 1.37
PFDN1O60925 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PFDN1O60925 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PFDN1O60925 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PFDN1O60925 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PFDN1O60925 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.54■■□□□ 1.36
PFDN1O60925 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PFDN1O60925 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PFDN1O60925 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PFDN1O60925 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PFDN1O60925 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PFDN1O60925 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PFDN1O60925 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.53■■□□□ 1.36
PFDN1O60925 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.53■■□□□ 1.36
PFDN1O60925 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PFDN1O60925 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PFDN1O60925 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PFDN1O60925 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PFDN1O60925 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
PFDN1O60925 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PFDN1O60925 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
PFDN1O60925 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PFDN1O60925 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PFDN1O60925 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PFDN1O60925 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
PFDN1O60925 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PFDN1O60925 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PFDN1O60925 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
PFDN1O60925 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms