Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
SEMA3EO15041 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
SEMA3EO15041 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
SEMA3EO15041 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
SEMA3EO15041 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
SEMA3EO15041 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.09■■■□□ 2.73
SEMA3EO15041 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.09■■■□□ 2.73
SEMA3EO15041 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SEMA3EO15041 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.07■■■□□ 2.72
SEMA3EO15041 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
SEMA3EO15041 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
SEMA3EO15041 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
SEMA3EO15041 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
SEMA3EO15041 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.05■■■□□ 2.72
SEMA3EO15041 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.04■■■□□ 2.72
SEMA3EO15041 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SEMA3EO15041 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
SEMA3EO15041 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32.02■■■□□ 2.72
SEMA3EO15041 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC32.02■■■□□ 2.72
SEMA3EO15041 LINC01971-201ENST00000617888 1048 ntBASIC32.02■■■□□ 2.72
SEMA3EO15041 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC32.02■■■□□ 2.72
SEMA3EO15041 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
SEMA3EO15041 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC32■■■□□ 2.71
SEMA3EO15041 HLA-V-202ENST00000446817 847 ntBASIC32■■■□□ 2.71
SEMA3EO15041 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32■■■□□ 2.71
SEMA3EO15041 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32■■■□□ 2.71
SEMA3EO15041 AC010864.1-201ENST00000609407 1511 ntBASIC32■■■□□ 2.71
SEMA3EO15041 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.99■■■□□ 2.71
SEMA3EO15041 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
SEMA3EO15041 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.99■■■□□ 2.71
SEMA3EO15041 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SEMA3EO15041 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.98■■■□□ 2.71
SEMA3EO15041 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
SEMA3EO15041 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.97■■■□□ 2.71
SEMA3EO15041 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SEMA3EO15041 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.96■■■□□ 2.71
SEMA3EO15041 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SEMA3EO15041 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.95■■■□□ 2.71
SEMA3EO15041 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
SEMA3EO15041 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
SEMA3EO15041 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.93■■■□□ 2.7
SEMA3EO15041 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
SEMA3EO15041 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.92■■■□□ 2.7
SEMA3EO15041 DUX4L11-201ENST00000611504 1267 ntBASIC31.92■■■□□ 2.7
SEMA3EO15041 DUX4L12-201ENST00000614593 1267 ntBASIC31.92■■■□□ 2.7
SEMA3EO15041 DUX4L14-201ENST00000621227 1267 ntBASIC31.92■■■□□ 2.7
SEMA3EO15041 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
SEMA3EO15041 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
SEMA3EO15041 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SEMA3EO15041 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
SEMA3EO15041 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SEMA3EO15041 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SEMA3EO15041 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.88■■■□□ 2.69
SEMA3EO15041 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
SEMA3EO15041 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.87■■■□□ 2.69
SEMA3EO15041 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.86■■■□□ 2.69
SEMA3EO15041 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.85■■■□□ 2.69
SEMA3EO15041 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SEMA3EO15041 MIR3648-2-201ENST00000581792 180 ntBASIC31.85■■■□□ 2.69
SEMA3EO15041 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.85■■■□□ 2.69
SEMA3EO15041 MIR3648-1-201ENST00000615959 180 ntBASIC31.85■■■□□ 2.69
SEMA3EO15041 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.84■■■□□ 2.69
SEMA3EO15041 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.82■■■□□ 2.68
SEMA3EO15041 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SEMA3EO15041 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SEMA3EO15041 MIR639-201ENST00000384974 98 ntBASIC31.81■■■□□ 2.68
SEMA3EO15041 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.81■■■□□ 2.68
SEMA3EO15041 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.81■■■□□ 2.68
SEMA3EO15041 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SEMA3EO15041 CR559946.2-201ENST00000623684 991 ntBASIC31.8■■■□□ 2.68
SEMA3EO15041 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SEMA3EO15041 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.79■■■□□ 2.68
SEMA3EO15041 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SEMA3EO15041 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
SEMA3EO15041 AL135925.1-201ENST00000605920 1701 ntBASIC31.79■■■□□ 2.68
SEMA3EO15041 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SEMA3EO15041 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
SEMA3EO15041 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SEMA3EO15041 AC016575.1-201ENST00000607026 382 ntBASIC31.77■■■□□ 2.68
SEMA3EO15041 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
SEMA3EO15041 LINC00273-201ENST00000539813 1452 ntBASIC31.77■■■□□ 2.68
SEMA3EO15041 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
SEMA3EO15041 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
SEMA3EO15041 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.76■■■□□ 2.67
SEMA3EO15041 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.76■■■□□ 2.67
SEMA3EO15041 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SEMA3EO15041 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.75■■■□□ 2.67
SEMA3EO15041 DUX4L13-201ENST00000554103 1267 ntBASIC31.75■■■□□ 2.67
SEMA3EO15041 DUX4L15-201ENST00000611059 1267 ntBASIC31.75■■■□□ 2.67
SEMA3EO15041 DUX4L23-201ENST00000615195 1269 ntBASIC31.75■■■□□ 2.67
SEMA3EO15041 DUX4L24-201ENST00000617576 1269 ntBASIC31.75■■■□□ 2.67
SEMA3EO15041 DUX4L22-201ENST00000618238 1269 ntBASIC31.75■■■□□ 2.67
SEMA3EO15041 DUX4L20-201ENST00000619712 1269 ntBASIC31.75■■■□□ 2.67
SEMA3EO15041 DUX4L21-201ENST00000622058 1269 ntBASIC31.75■■■□□ 2.67
SEMA3EO15041 DUX4L10-201ENST00000622460 1267 ntBASIC31.75■■■□□ 2.67
SEMA3EO15041 DUX4L25-201ENST00000624915 1269 ntBASIC31.75■■■□□ 2.67
SEMA3EO15041 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
SEMA3EO15041 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SEMA3EO15041 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SEMA3EO15041 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.73■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms