Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
TBC1D3BA6NDS4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TBC1D3BA6NDS4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.99■■□□□ 1.91
TBC1D3BA6NDS4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TBC1D3BA6NDS4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
TBC1D3BA6NDS4 AC016575.1-201ENST00000607026 382 ntBASIC26.98■■□□□ 1.91
TBC1D3BA6NDS4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.97■■□□□ 1.91
TBC1D3BA6NDS4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.97■■□□□ 1.91
TBC1D3BA6NDS4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TBC1D3BA6NDS4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.96■■□□□ 1.91
TBC1D3BA6NDS4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.96■■□□□ 1.91
TBC1D3BA6NDS4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.96■■□□□ 1.91
TBC1D3BA6NDS4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TBC1D3BA6NDS4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TBC1D3BA6NDS4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TBC1D3BA6NDS4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TBC1D3BA6NDS4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
TBC1D3BA6NDS4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.95■■□□□ 1.9
TBC1D3BA6NDS4 MIR4449-201ENST00000578365 66 ntBASIC26.95■■□□□ 1.9
TBC1D3BA6NDS4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.95■■□□□ 1.9
TBC1D3BA6NDS4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TBC1D3BA6NDS4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.94■■□□□ 1.9
TBC1D3BA6NDS4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.94■■□□□ 1.9
TBC1D3BA6NDS4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TBC1D3BA6NDS4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.93■■□□□ 1.9
TBC1D3BA6NDS4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TBC1D3BA6NDS4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TBC1D3BA6NDS4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
TBC1D3BA6NDS4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TBC1D3BA6NDS4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TBC1D3BA6NDS4 CR559946.2-201ENST00000623684 991 ntBASIC26.9■■□□□ 1.9
TBC1D3BA6NDS4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.89■■□□□ 1.9
TBC1D3BA6NDS4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
TBC1D3BA6NDS4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.87■■□□□ 1.89
TBC1D3BA6NDS4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TBC1D3BA6NDS4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.85■■□□□ 1.89
TBC1D3BA6NDS4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.84■■□□□ 1.89
TBC1D3BA6NDS4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TBC1D3BA6NDS4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TBC1D3BA6NDS4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TBC1D3BA6NDS4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.82■■□□□ 1.88
TBC1D3BA6NDS4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
TBC1D3BA6NDS4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
TBC1D3BA6NDS4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TBC1D3BA6NDS4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TBC1D3BA6NDS4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TBC1D3BA6NDS4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TBC1D3BA6NDS4 DUX4L13-201ENST00000554103 1267 ntBASIC26.79■■□□□ 1.88
TBC1D3BA6NDS4 DUX4L15-201ENST00000611059 1267 ntBASIC26.79■■□□□ 1.88
TBC1D3BA6NDS4 DUX4L23-201ENST00000615195 1269 ntBASIC26.79■■□□□ 1.88
TBC1D3BA6NDS4 DUX4L24-201ENST00000617576 1269 ntBASIC26.79■■□□□ 1.88
TBC1D3BA6NDS4 DUX4L22-201ENST00000618238 1269 ntBASIC26.79■■□□□ 1.88
TBC1D3BA6NDS4 DUX4L20-201ENST00000619712 1269 ntBASIC26.79■■□□□ 1.88
TBC1D3BA6NDS4 DUX4L21-201ENST00000622058 1269 ntBASIC26.79■■□□□ 1.88
TBC1D3BA6NDS4 DUX4L10-201ENST00000622460 1267 ntBASIC26.79■■□□□ 1.88
TBC1D3BA6NDS4 DUX4L25-201ENST00000624915 1269 ntBASIC26.79■■□□□ 1.88
TBC1D3BA6NDS4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TBC1D3BA6NDS4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TBC1D3BA6NDS4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TBC1D3BA6NDS4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.77■■□□□ 1.88
TBC1D3BA6NDS4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TBC1D3BA6NDS4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.76■■□□□ 1.87
TBC1D3BA6NDS4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TBC1D3BA6NDS4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
TBC1D3BA6NDS4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.75■■□□□ 1.87
TBC1D3BA6NDS4 AC010864.1-201ENST00000609407 1511 ntBASIC26.75■■□□□ 1.87
TBC1D3BA6NDS4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.74■■□□□ 1.87
TBC1D3BA6NDS4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.74■■□□□ 1.87
TBC1D3BA6NDS4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TBC1D3BA6NDS4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
TBC1D3BA6NDS4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
TBC1D3BA6NDS4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.73■■□□□ 1.87
TBC1D3BA6NDS4 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.73■■□□□ 1.87
TBC1D3BA6NDS4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
TBC1D3BA6NDS4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TBC1D3BA6NDS4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TBC1D3BA6NDS4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TBC1D3BA6NDS4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TBC1D3BA6NDS4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TBC1D3BA6NDS4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TBC1D3BA6NDS4 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.71■■□□□ 1.87
TBC1D3BA6NDS4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TBC1D3BA6NDS4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TBC1D3BA6NDS4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.7■■□□□ 1.86
TBC1D3BA6NDS4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.7■■□□□ 1.86
TBC1D3BA6NDS4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.69■■□□□ 1.86
TBC1D3BA6NDS4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
TBC1D3BA6NDS4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TBC1D3BA6NDS4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TBC1D3BA6NDS4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TBC1D3BA6NDS4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
TBC1D3BA6NDS4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.68■■□□□ 1.86
TBC1D3BA6NDS4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TBC1D3BA6NDS4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.67■■□□□ 1.86
TBC1D3BA6NDS4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.67■■□□□ 1.86
TBC1D3BA6NDS4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
TBC1D3BA6NDS4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
TBC1D3BA6NDS4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.65■■□□□ 1.86
TBC1D3BA6NDS4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TBC1D3BA6NDS4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms