Protein–RNA interactions for Protein: A0A087WUM0

SYNJ2BP-COX16, SYNJ2BP-COX16 readthrough (Fragment), humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16A0A087WUM0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.51■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.5■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.49■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.49■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 AC010864.1-201ENST00000609407 1511 ntBASIC27.49■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 ST7-AS1-201ENST00000456775 1889 ntBASIC27.47■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.46■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.43■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 AC044849.2-201ENST00000606596 710 ntBASIC27.41■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.38■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.38■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 MIR6090-201ENST00000622481 60 ntBASIC27.37■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.36■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 AC108673.1-201ENST00000510422 1159 ntBASIC27.34■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.34■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.3■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.3■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.27■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.23■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.22■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.2■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.19■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 AC127502.1-201ENST00000399971 1502 ntBASIC27.18■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.17■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 AC139426.1-201ENST00000568218 2529 ntBASIC27.17■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms