Protein–RNA interactions for Protein: A0A087WUM0

SYNJ2BP-COX16, SYNJ2BP-COX16 readthrough (Fragment), humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16A0A087WUM0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.51■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.5■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.49■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.49■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 AC010864.1-201ENST00000609407 1511 ntBASIC27.49■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 ST7-AS1-201ENST00000456775 1889 ntBASIC27.47■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.46■■□□□ 1.99
SYNJ2BP-COX16A0A087WUM0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.43■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 AC044849.2-201ENST00000606596 710 ntBASIC27.41■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SYNJ2BP-COX16A0A087WUM0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.38■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.38■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 MIR6090-201ENST00000622481 60 ntBASIC27.37■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.36■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 AC108673.1-201ENST00000510422 1159 ntBASIC27.34■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.34■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
SYNJ2BP-COX16A0A087WUM0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.3■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.3■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.27■■□□□ 1.96
SYNJ2BP-COX16A0A087WUM0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.23■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.22■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
SYNJ2BP-COX16A0A087WUM0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.2■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.19■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 AC127502.1-201ENST00000399971 1502 ntBASIC27.18■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.17■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 AC139426.1-201ENST00000568218 2529 ntBASIC27.17■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms