Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA13Q9Y5I0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA13Q9Y5I0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA13Q9Y5I0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA13Q9Y5I0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 KRT87P-202ENST00000534226 1464 ntBASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 MIR2861-201ENST00000636310 90 ntBASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA13Q9Y5I0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 KRT16P2-201ENST00000414673 1423 ntBASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 AC245052.3-201ENST00000450182 901 ntBASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 AC079140.4-201ENST00000507448 529 ntBASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA13Q9Y5I0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 SMG8-203ENST00000578922 2178 ntBASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 AC138907.5-202ENST00000569484 235 ntBASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA13Q9Y5I0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHA13Q9Y5I0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHA13Q9Y5I0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
PCDHA13Q9Y5I0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
PCDHA13Q9Y5I0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHA13Q9Y5I0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDHA13Q9Y5I0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHA13Q9Y5I0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHA13Q9Y5I0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA13Q9Y5I0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PCDHA13Q9Y5I0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHA13Q9Y5I0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHA13Q9Y5I0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA13Q9Y5I0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA13Q9Y5I0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHA13Q9Y5I0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA13Q9Y5I0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA13Q9Y5I0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHA13Q9Y5I0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA13Q9Y5I0 AL358852.1-201ENST00000623174 1268 ntBASIC21.81■■□□□ 1.08
PCDHA13Q9Y5I0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA13Q9Y5I0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA13Q9Y5I0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA13Q9Y5I0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 773.2 ms