Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SH3TC1Q8TE82 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SH3TC1Q8TE82 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SH3TC1Q8TE82 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SH3TC1Q8TE82 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SH3TC1Q8TE82 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SH3TC1Q8TE82 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SH3TC1Q8TE82 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.64■■□□□ 1.7
SH3TC1Q8TE82 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
SH3TC1Q8TE82 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SH3TC1Q8TE82 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 ARL16-209ENST00000573715 763 ntTSL 3 BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 ARL16-211ENST00000576135 694 ntTSL 3 BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 AL356652.1-201ENST00000615962 565 ntBASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 BRWD1-AS2-201ENST00000603064 1028 ntBASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC25.63■■□□□ 1.69
SH3TC1Q8TE82 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 GGT1-206ENST00000404223 952 ntTSL 2 BASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 SERP1-205ENST00000487153 657 ntTSL 4 BASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SH3TC1Q8TE82 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SH3TC1Q8TE82 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SH3TC1Q8TE82 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
SH3TC1Q8TE82 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
SH3TC1Q8TE82 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SH3TC1Q8TE82 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.6■■□□□ 1.69
SH3TC1Q8TE82 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC25.6■■□□□ 1.69
SH3TC1Q8TE82 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SH3TC1Q8TE82 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SH3TC1Q8TE82 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
SH3TC1Q8TE82 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SH3TC1Q8TE82 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
SH3TC1Q8TE82 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SH3TC1Q8TE82 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC25.6■■□□□ 1.69
SH3TC1Q8TE82 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
SH3TC1Q8TE82 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC25.59■■□□□ 1.69
SH3TC1Q8TE82 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SH3TC1Q8TE82 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SH3TC1Q8TE82 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SH3TC1Q8TE82 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SH3TC1Q8TE82 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms