Protein–RNA interactions for Protein: Q6Q5H1

TY1A-PR3, Transposon Ty1-PR3 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR3Q6Q5H1 YBR064WYBR064W 429 nt3.49□□□□□ -1.85
TY1A-PR3Q6Q5H1 CHD1YER164W 4407 nt3.49□□□□□ -1.85
TY1A-PR3Q6Q5H1 GYP7YDL234C 2241 nt3.48□□□□□ -1.85
TY1A-PR3Q6Q5H1 XRS2YDR369C 2565 nt3.48□□□□□ -1.85
TY1A-PR3Q6Q5H1 COG3YER157W 2406 nt3.48□□□□□ -1.85
TY1A-PR3Q6Q5H1 EXO84YBR102C 2262 nt3.48□□□□□ -1.85
TY1A-PR3Q6Q5H1 YIL032CYIL032C 357 nt3.48□□□□□ -1.85
TY1A-PR3Q6Q5H1 YJL181WYJL181W 1836 nt3.48□□□□□ -1.85
TY1A-PR3Q6Q5H1 CDC24YAL041W 2565 nt3.47□□□□□ -1.85
TY1A-PR3Q6Q5H1 RPL40AYIL148W 387 nt3.47□□□□□ -1.85
TY1A-PR3Q6Q5H1 LSM1YJL124C 519 nt3.47□□□□□ -1.85
TY1A-PR3Q6Q5H1 SOD1YJR104C 465 nt3.47□□□□□ -1.85
TY1A-PR3Q6Q5H1 RDN5-1RDN5-1 121 nt3.47□□□□□ -1.85
TY1A-PR3Q6Q5H1 RDN5-6RDN5-6 121 nt3.47□□□□□ -1.85
TY1A-PR3Q6Q5H1 RPL36BYPL249C-A 303 nt3.47□□□□□ -1.85
TY1A-PR3Q6Q5H1 YPR146CYPR146C 330 nt3.47□□□□□ -1.85
TY1A-PR3Q6Q5H1 XRN1YGL173C 4587 nt3.47□□□□□ -1.85
TY1A-PR3Q6Q5H1 BNA4YBL098W 1383 nt3.47□□□□□ -1.85
TY1A-PR3Q6Q5H1 SIZ1YDR409W 2715 nt3.47□□□□□ -1.85
TY1A-PR3Q6Q5H1 YGL036WYGL036W 2730 nt3.47□□□□□ -1.85
TY1A-PR3Q6Q5H1 VPS64YDR200C 1815 nt3.47□□□□□ -1.85
TY1A-PR3Q6Q5H1 YLR352WYLR352W 2424 nt3.46□□□□□ -1.85
TY1A-PR3Q6Q5H1 KRE5YOR336W 4098 nt3.46□□□□□ -1.85
TY1A-PR3Q6Q5H1 MYO5YMR109W 3660 nt3.46□□□□□ -1.86
TY1A-PR3Q6Q5H1 PRP22YER013W 3438 nt3.46□□□□□ -1.86
TY1A-PR3Q6Q5H1 YDL185C-AYDL185C-A 228 nt3.46□□□□□ -1.86
TY1A-PR3Q6Q5H1 AYR1YIL124W 894 nt3.46□□□□□ -1.86
TY1A-PR3Q6Q5H1 YLR154W-BYLR154W-B 165 nt3.46□□□□□ -1.86
TY1A-PR3Q6Q5H1 TOM5YPR133W-A 153 nt3.46□□□□□ -1.86
TY1A-PR3Q6Q5H1 VTC4YJL012C 2166 nt3.46□□□□□ -1.86
TY1A-PR3Q6Q5H1 NSP1YJL041W 2472 nt3.45□□□□□ -1.86
TY1A-PR3Q6Q5H1 NUP159YIL115C 4383 nt3.45□□□□□ -1.86
TY1A-PR3Q6Q5H1 YGL239CYGL239C 315 nt3.45□□□□□ -1.86
TY1A-PR3Q6Q5H1 Q0143Q0143 153 nt3.45□□□□□ -1.86
TY1A-PR3Q6Q5H1 YLR053CYLR053C 327 nt3.45□□□□□ -1.86
TY1A-PR3Q6Q5H1 RPL32YBL092W 393 nt3.45□□□□□ -1.86
TY1A-PR3Q6Q5H1 TRM7YBR061C 933 nt3.45□□□□□ -1.86
TY1A-PR3Q6Q5H1 YIL166CYIL166C 1629 nt3.44□□□□□ -1.86
TY1A-PR3Q6Q5H1 TCP1YDR212W 1680 nt3.44□□□□□ -1.86
TY1A-PR3Q6Q5H1 YDL007C-AYDL007C-A 258 nt3.44□□□□□ -1.86
TY1A-PR3Q6Q5H1 VPS3YDR495C 3036 nt3.44□□□□□ -1.86
TY1A-PR3Q6Q5H1 NOP4YPL043W 2058 nt3.43□□□□□ -1.86
TY1A-PR3Q6Q5H1 IGO2YHR132W-A 396 nt3.43□□□□□ -1.86
TY1A-PR3Q6Q5H1 YNL170WYNL170W 396 nt3.43□□□□□ -1.86
TY1A-PR3Q6Q5H1 YDR210W-BYDR210W-B 5313 nt3.43□□□□□ -1.86
TY1A-PR3Q6Q5H1 YDR261W-BYDR261W-B 5313 nt3.43□□□□□ -1.86
TY1A-PR3Q6Q5H1 YFL002W-AYFL002W-A 5313 nt3.43□□□□□ -1.86
TY1A-PR3Q6Q5H1 YGR161W-BYGR161W-B 5313 nt3.43□□□□□ -1.86
TY1A-PR3Q6Q5H1 YLR410W-BYLR410W-B 5313 nt3.43□□□□□ -1.86
TY1A-PR3Q6Q5H1 YCL019WYCL019W 5313 nt3.43□□□□□ -1.86
TY1A-PR3Q6Q5H1 ECM25YJL201W 1800 nt3.42□□□□□ -1.86
TY1A-PR3Q6Q5H1 SKT5YBL061C 2091 nt3.42□□□□□ -1.86
TY1A-PR3Q6Q5H1 SSE1YPL106C 2082 nt3.42□□□□□ -1.86
TY1A-PR3Q6Q5H1 YER121WYER121W 345 nt3.42□□□□□ -1.86
TY1A-PR3Q6Q5H1 RPS27AYKL156W 249 nt3.42□□□□□ -1.86
TY1A-PR3Q6Q5H1 FAS1YKL182W 6156 nt3.42□□□□□ -1.86
TY1A-PR3Q6Q5H1 LYP1YNL268W 1836 nt3.42□□□□□ -1.86
TY1A-PR3Q6Q5H1 TAF6YGL112C 1551 nt3.42□□□□□ -1.86
TY1A-PR3Q6Q5H1 FAR1YJL157C 2493 nt3.41□□□□□ -1.86
TY1A-PR3Q6Q5H1 YMR31YFR049W 372 nt3.41□□□□□ -1.86
TY1A-PR3Q6Q5H1 GPG1YGL121C 381 nt3.41□□□□□ -1.86
TY1A-PR3Q6Q5H1 DOA4YDR069C 2781 nt3.41□□□□□ -1.86
TY1A-PR3Q6Q5H1 FLO8YER109C 2400 nt3.41□□□□□ -1.86
TY1A-PR3Q6Q5H1 SPT6YGR116W 4356 nt3.41□□□□□ -1.86
TY1A-PR3Q6Q5H1 MVP1YMR004W 1536 nt3.4□□□□□ -1.86
TY1A-PR3Q6Q5H1 MET10YFR030W 3108 nt3.4□□□□□ -1.86
TY1A-PR3Q6Q5H1 YGL052WYGL052W 306 nt3.4□□□□□ -1.87
TY1A-PR3Q6Q5H1 YLR342W-AYLR342W-A 174 nt3.4□□□□□ -1.87
TY1A-PR3Q6Q5H1 APE2YKL157W 2859 nt3.4□□□□□ -1.87
TY1A-PR3Q6Q5H1 SOK1YDR006C 2706 nt3.4□□□□□ -1.87
TY1A-PR3Q6Q5H1 POM152YMR129W 4014 nt3.4□□□□□ -1.87
TY1A-PR3Q6Q5H1 RLF2YPR018W 1821 nt3.39□□□□□ -1.87
TY1A-PR3Q6Q5H1 OSH3YHR073W 2991 nt3.39□□□□□ -1.87
TY1A-PR3Q6Q5H1 SWI3YJL176C 2478 nt3.38□□□□□ -1.87
TY1A-PR3Q6Q5H1 GCD6YDR211W 2139 nt3.38□□□□□ -1.87
TY1A-PR3Q6Q5H1 MSR1YHR091C 1932 nt3.38□□□□□ -1.87
TY1A-PR3Q6Q5H1 BFA1YJR053W 1725 nt3.38□□□□□ -1.87
TY1A-PR3Q6Q5H1 NTO1YPR031W 2247 nt3.38□□□□□ -1.87
TY1A-PR3Q6Q5H1 EPL1YFL024C 2499 nt3.37□□□□□ -1.87
TY1A-PR3Q6Q5H1 SPB1YCL054W 2526 nt3.37□□□□□ -1.87
TY1A-PR3Q6Q5H1 RAD26YJR035W 3258 nt3.37□□□□□ -1.87
TY1A-PR3Q6Q5H1 PSK2YOL045W 3306 nt3.37□□□□□ -1.87
TY1A-PR3Q6Q5H1 SPC19YDR201W 498 nt3.37□□□□□ -1.87
TY1A-PR3Q6Q5H1 PHM6YDR281C 315 nt3.37□□□□□ -1.87
TY1A-PR3Q6Q5H1 YIL165CYIL165C 360 nt3.37□□□□□ -1.87
TY1A-PR3Q6Q5H1 RPL36AYMR194W 303 nt3.37□□□□□ -1.87
TY1A-PR3Q6Q5H1 CYB5YNL111C 363 nt3.37□□□□□ -1.87
TY1A-PR3Q6Q5H1 RPL20BYOR312C 519 nt3.37□□□□□ -1.87
TY1A-PR3Q6Q5H1 YBR197CYBR197C 654 nt3.37□□□□□ -1.87
TY1A-PR3Q6Q5H1 TRS65YGR166W 1683 nt3.36□□□□□ -1.87
TY1A-PR3Q6Q5H1 RBK1YCR036W 1002 nt3.36□□□□□ -1.87
TY1A-PR3Q6Q5H1 SAR1YPL218W 573 nt3.36□□□□□ -1.87
TY1A-PR3Q6Q5H1 RSC30YHR056C 2652 nt3.36□□□□□ -1.87
TY1A-PR3Q6Q5H1 NPR2YEL062W 1848 nt3.35□□□□□ -1.87
TY1A-PR3Q6Q5H1 ALA1YOR335C 2877 nt3.35□□□□□ -1.87
TY1A-PR3Q6Q5H1 RAD4YER162C 2265 nt3.35□□□□□ -1.87
TY1A-PR3Q6Q5H1 SYT1YPR095C 3681 nt3.35□□□□□ -1.87
TY1A-PR3Q6Q5H1 YER189WYER189W 369 nt3.35□□□□□ -1.87
TY1A-PR3Q6Q5H1 RPS23AYGR118W 438 nt3.35□□□□□ -1.87
TY1A-PR3Q6Q5H1 RAM2YKL019W 951 nt3.35□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms