Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 YGR226CYGR226C 210 nt1.9□□□□□ -2.11
TDA11P38854 ACF4YJR083C 930 nt1.9□□□□□ -2.11
TDA11P38854 GIP3YPL137C 3831 nt1.9□□□□□ -2.11
TDA11P38854 YPR170CYPR170C 336 nt1.9□□□□□ -2.11
TDA11P38854 TRS20YBR254C 528 nt1.9□□□□□ -2.11
TDA11P38854 YBR287WYBR287W 1284 nt1.9□□□□□ -2.11
TDA11P38854 PSK2YOL045W 3306 nt1.89□□□□□ -2.11
TDA11P38854 SSF1YHR066W 1362 nt1.89□□□□□ -2.11
TDA11P38854 YGR115CYGR115C 780 nt1.89□□□□□ -2.11
TDA11P38854 HYR1YIR037W 492 nt1.89□□□□□ -2.11
TDA11P38854 YJR023CYJR023C 402 nt1.89□□□□□ -2.11
TDA11P38854 ERG29YMR134W 714 nt1.89□□□□□ -2.11
TDA11P38854 YOL159C-AYOL159C-A 273 nt1.89□□□□□ -2.11
TDA11P38854 YPL034WYPL034W 498 nt1.89□□□□□ -2.11
TDA11P38854 YCL007CYCL007C 393 nt1.89□□□□□ -2.11
TDA11P38854 SHE4YOR035C 2370 nt1.89□□□□□ -2.11
TDA11P38854 KAR9YPL269W 1935 nt1.89□□□□□ -2.11
TDA11P38854 VPS74YDR372C 1038 nt1.88□□□□□ -2.11
TDA11P38854 TSA2YDR453C 591 nt1.88□□□□□ -2.11
TDA11P38854 FAR7YFR008W 666 nt1.88□□□□□ -2.11
TDA11P38854 RPS22BYLR367W 393 nt1.88□□□□□ -2.11
TDA11P38854 YLR458WYLR458W 381 nt1.88□□□□□ -2.11
TDA11P38854 LSM7YNL147W 348 nt1.88□□□□□ -2.11
TDA11P38854 COS111YBR203W 2775 nt1.87□□□□□ -2.11
TDA11P38854 ATG9YDL149W 2994 nt1.87□□□□□ -2.11
TDA11P38854 CDC53YDL132W 2448 nt1.87□□□□□ -2.11
TDA11P38854 snR83snR83 306 nt1.87□□□□□ -2.11
TDA11P38854 DAD4YDR320C-A 219 nt1.87□□□□□ -2.11
TDA11P38854 YGR109W-AYGR109W-A 873 nt1.87□□□□□ -2.11
TDA11P38854 YIL058WYIL058W 285 nt1.87□□□□□ -2.11
TDA11P38854 YIL082WYIL082W 873 nt1.87□□□□□ -2.11
TDA11P38854 YJL119CYJL119C 324 nt1.87□□□□□ -2.11
TDA11P38854 RPC25YKL144C 639 nt1.87□□□□□ -2.11
TDA11P38854 RTP1YMR185W 2946 nt1.87□□□□□ -2.11
TDA11P38854 MPH1YIR002C 2982 nt1.87□□□□□ -2.11
TDA11P38854 ECM5YMR176W 4236 nt1.87□□□□□ -2.11
TDA11P38854 UBP11YKR098C 2154 nt1.86□□□□□ -2.11
TDA11P38854 SEC28YIL076W 891 nt1.86□□□□□ -2.11
TDA11P38854 SRP21YKL122C 504 nt1.86□□□□□ -2.11
TDA11P38854 HHT2YNL031C 411 nt1.86□□□□□ -2.11
TDA11P38854 TAZ1YPR140W 1146 nt1.86□□□□□ -2.11
TDA11P38854 MED8YBR193C 672 nt1.86□□□□□ -2.11
TDA11P38854 NCB2YDR397C 441 nt1.85□□□□□ -2.11
TDA11P38854 TDA2YER071C 381 nt1.85□□□□□ -2.11
TDA11P38854 NOP10YHR072W-A 177 nt1.85□□□□□ -2.11
TDA11P38854 RAM2YKL019W 951 nt1.85□□□□□ -2.11
TDA11P38854 PDP3YLR455W 915 nt1.85□□□□□ -2.11
TDA11P38854 LSM2YBL026W 288 nt1.85□□□□□ -2.11
TDA11P38854 TOA1YOR194C 861 nt1.85□□□□□ -2.11
TDA11P38854 SPO22YIL073C 2928 nt1.85□□□□□ -2.11
TDA11P38854 MMS22YLR320W 4365 nt1.84□□□□□ -2.11
TDA11P38854 YHR214C-BYHR214C-B 5382 nt1.84□□□□□ -2.11
TDA11P38854 FMP16YDR070C 282 nt1.84□□□□□ -2.11
TDA11P38854 ATG38YLR211C 681 nt1.84□□□□□ -2.11
TDA11P38854 YLR302CYLR302C 363 nt1.84□□□□□ -2.11
TDA11P38854 URA5YML106W 681 nt1.84□□□□□ -2.11
TDA11P38854 SIP18YMR175W 240 nt1.84□□□□□ -2.11
TDA11P38854 YOR333CYOR333C 417 nt1.84□□□□□ -2.11
TDA11P38854 MSS18YPR134W 807 nt1.84□□□□□ -2.11
TDA11P38854 YCL002CYCL002C 792 nt1.84□□□□□ -2.11
TDA11P38854 UBR2YLR024C 5619 nt1.84□□□□□ -2.12
TDA11P38854 NDD1YOR372C 1665 nt1.83□□□□□ -2.12
TDA11P38854 SMD1YGR074W 441 nt1.83□□□□□ -2.12
TDA11P38854 YHR210CYHR210C 1026 nt1.83□□□□□ -2.12
TDA11P38854 MSL1YIR009W 336 nt1.83□□□□□ -2.12
TDA11P38854 ATP20YPR020W 348 nt1.83□□□□□ -2.12
TDA11P38854 TBS1YBR150C 3285 nt1.83□□□□□ -2.12
TDA11P38854 PTC5YOR090C 1719 nt1.83□□□□□ -2.12
TDA11P38854 YOR093CYOR093C 4947 nt1.83□□□□□ -2.12
TDA11P38854 VPS8YAL002W 3825 nt1.82□□□□□ -2.12
TDA11P38854 YDL009CYDL009C 324 nt1.82□□□□□ -2.12
TDA11P38854 MND1YGL183C 660 nt1.82□□□□□ -2.12
TDA11P38854 PEP8YJL053W 1140 nt1.82□□□□□ -2.12
TDA11P38854 SNC1YAL030W 354 nt1.82□□□□□ -2.12
TDA11P38854 CSE4YKL049C 690 nt1.82□□□□□ -2.12
TDA11P38854 CFT2YLR115W 2580 nt1.82□□□□□ -2.12
TDA11P38854 GYP5YPL249C 2685 nt1.82□□□□□ -2.12
TDA11P38854 PDR8YLR266C 2106 nt1.81□□□□□ -2.12
TDA11P38854 HOP2YGL033W 657 nt1.81□□□□□ -2.12
TDA11P38854 LAG1YHL003C 1236 nt1.81□□□□□ -2.12
TDA11P38854 YJL147CYJL147C 1149 nt1.81□□□□□ -2.12
TDA11P38854 YLR053CYLR053C 327 nt1.81□□□□□ -2.12
TDA11P38854 ATP18YML081C-A 180 nt1.81□□□□□ -2.12
TDA11P38854 TAP42YMR028W 1101 nt1.81□□□□□ -2.12
TDA11P38854 YMR052C-AYMR052C-A 366 nt1.81□□□□□ -2.12
TDA11P38854 YOR364WYOR364W 369 nt1.81□□□□□ -2.12
TDA11P38854 UTP21YLR409C 2820 nt1.81□□□□□ -2.12
TDA11P38854 VPH1YOR270C 2523 nt1.81□□□□□ -2.12
TDA11P38854 TRL1YJL087C 2484 nt1.8□□□□□ -2.12
TDA11P38854 IRC10YOL015W 1761 nt1.8□□□□□ -2.12
TDA11P38854 YJL070CYJL070C 2667 nt1.8□□□□□ -2.12
TDA11P38854 MNE1YOR350C 1992 nt1.8□□□□□ -2.12
TDA11P38854 AHC2YCR082W 387 nt1.8□□□□□ -2.12
TDA11P38854 YDR286CYDR286C 345 nt1.8□□□□□ -2.12
TDA11P38854 RPL29YFR032C-A 180 nt1.8□□□□□ -2.12
TDA11P38854 PGD1YGL025C 1194 nt1.8□□□□□ -2.12
TDA11P38854 SDS22YKL193C 1017 nt1.8□□□□□ -2.12
TDA11P38854 YNL050CYNL050C 813 nt1.8□□□□□ -2.12
TDA11P38854 OST2YOR103C 393 nt1.8□□□□□ -2.12
TDA11P38854 YBR063CYBR063C 1215 nt1.8□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 24.8 ms