Protein–RNA interactions for Protein: P38316

ATG12, Ubiquitin-like protein ATG12, yeast

Predictions only

Length 186 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	P38316	snR5	snR5	204 nt		1.93	□□□□□ -2.1
ATG12	P38316	YDR029W	YDR029W	315 nt		1.93	□□□□□ -2.1
ATG12	P38316	ANS1	YHR126C	480 nt		1.93	□□□□□ -2.1
ATG12	P38316	MUD1	YBR119W	897 nt		1.93	□□□□□ -2.1
ATG12	P38316	DAD1	YDR016C	285 nt		1.92	□□□□□ -2.1
ATG12	P38316	YHR180W-A	YHR180W-A	183 nt		1.92	□□□□□ -2.1
ATG12	P38316	ECM9	YKR004C	1134 nt		1.92	□□□□□ -2.1
ATG12	P38316	UTP30	YKR060W	825 nt		1.92	□□□□□ -2.1
ATG12	P38316	PAU8	YAL068C	363 nt		1.92	□□□□□ -2.1
ATG12	P38316	PAU20	YOL161C	363 nt		1.92	□□□□□ -2.1
ATG12	P38316	LOA1	YPR139C	903 nt		1.92	□□□□□ -2.1
ATG12	P38316	YJR098C	YJR098C	1971 nt		1.92	□□□□□ -2.1
ATG12	P38316	PSO2	YMR137C	1986 nt		1.91	□□□□□ -2.1
ATG12	P38316	UBX3	YDL091C	1368 nt		1.91	□□□□□ -2.1
ATG12	P38316	TAD1	YGL243W	1203 nt		1.91	□□□□□ -2.1
ATG12	P38316	YJL086C	YJL086C	369 nt		1.91	□□□□□ -2.1
ATG12	P38316	YJR087W	YJR087W	351 nt		1.91	□□□□□ -2.1
ATG12	P38316	SDS22	YKL193C	1017 nt		1.91	□□□□□ -2.1
ATG12	P38316	RMP1	YLR145W	606 nt		1.91	□□□□□ -2.1
ATG12	P38316	RPS17A	YML024W	411 nt		1.91	□□□□□ -2.1
ATG12	P38316	VPS20	YMR077C	666 nt		1.91	□□□□□ -2.1
ATG12	P38316	YOL150C	YOL150C	312 nt		1.91	□□□□□ -2.1
ATG12	P38316	TRM7	YBR061C	933 nt		1.91	□□□□□ -2.1
ATG12	P38316	YPR172W	YPR172W	603 nt		1.91	□□□□□ -2.1
ATG12	P38316	YDR210W-A	YDR210W-A	1317 nt		1.91	□□□□□ -2.1
ATG12	P38316	YDR018C	YDR018C	1191 nt		1.9	□□□□□ -2.11
ATG12	P38316	YGR226C	YGR226C	210 nt		1.9	□□□□□ -2.11
ATG12	P38316	PRP21	YJL203W	843 nt		1.9	□□□□□ -2.11
ATG12	P38316	YET1	YKL065C	621 nt		1.9	□□□□□ -2.11
ATG12	P38316	YOR392W	YOR392W	444 nt		1.9	□□□□□ -2.11
ATG12	P38316	NSL1	YPL233W	651 nt		1.9	□□□□□ -2.11
ATG12	P38316	AFI1	YOR129C	2682 nt		1.89	□□□□□ -2.11
ATG12	P38316	YMR144W	YMR144W	1029 nt		1.89	□□□□□ -2.11
ATG12	P38316	OST2	YOR103C	393 nt		1.89	□□□□□ -2.11
ATG12	P38316	YPR170C	YPR170C	336 nt		1.89	□□□□□ -2.11
ATG12	P38316	YBR277C	YBR277C	402 nt		1.89	□□□□□ -2.11
ATG12	P38316	Q0017	Q0017	162 nt		1.89	□□□□□ -2.11
ATG12	P38316	MSL5	YLR116W	1431 nt		1.89	□□□□□ -2.11
ATG12	P38316	RRP6	YOR001W	2202 nt		1.89	□□□□□ -2.11
ATG12	P38316	SNF12	YNR023W	1701 nt		1.88	□□□□□ -2.11
ATG12	P38316	ECM5	YMR176W	4236 nt		1.88	□□□□□ -2.11
ATG12	P38316	YPR097W	YPR097W	3222 nt		1.88	□□□□□ -2.11
ATG12	P38316	YDR115W	YDR115W	318 nt		1.88	□□□□□ -2.11
ATG12	P38316	NCB2	YDR397C	441 nt		1.88	□□□□□ -2.11
ATG12	P38316	YGR109W-A	YGR109W-A	873 nt		1.88	□□□□□ -2.11
ATG12	P38316	YIL082W	YIL082W	873 nt		1.88	□□□□□ -2.11
ATG12	P38316	SDL1	YIL167W	633 nt		1.88	□□□□□ -2.11
ATG12	P38316	YIR020C-B	YIR020C-B	735 nt		1.88	□□□□□ -2.11
ATG12	P38316	YMR272W-B	YMR272W-B	108 nt		1.88	□□□□□ -2.11
ATG12	P38316	ARR2	YPR200C	393 nt		1.88	□□□□□ -2.11
ATG12	P38316	ECM25	YJL201W	1800 nt		1.88	□□□□□ -2.11
ATG12	P38316	CRD1	YDL142C	852 nt		1.87	□□□□□ -2.11
ATG12	P38316	EMC4	YGL231C	573 nt		1.87	□□□□□ -2.11
ATG12	P38316	YGR242W	YGR242W	309 nt		1.87	□□□□□ -2.11
ATG12	P38316	IST3	YIR005W	447 nt		1.87	□□□□□ -2.11
ATG12	P38316	YLR154W-A	YLR154W-A	186 nt		1.87	□□□□□ -2.11
ATG12	P38316	YLR202C	YLR202C	327 nt		1.87	□□□□□ -2.11
ATG12	P38316	ATG38	YLR211C	681 nt		1.87	□□□□□ -2.11
ATG12	P38316	15S_rRNA	15S_rRNA	1649 nt		1.87	□□□□□ -2.11
ATG12	P38316	SFB2	YNL049C	2631 nt		1.87	□□□□□ -2.11
ATG12	P38316	YOR093C	YOR093C	4947 nt		1.86	□□□□□ -2.11
ATG12	P38316	HSH155	YMR288W	2916 nt		1.86	□□□□□ -2.11
ATG12	P38316	YDL016C	YDL016C	303 nt		1.86	□□□□□ -2.11
ATG12	P38316	PBP4	YDL053C	558 nt		1.86	□□□□□ -2.11
ATG12	P38316	TMA20	YER007C-A	546 nt		1.86	□□□□□ -2.11
ATG12	P38316	YER068C-A	YER068C-A	432 nt		1.86	□□□□□ -2.11
ATG12	P38316	YOR169C	YOR169C	465 nt		1.86	□□□□□ -2.11
ATG12	P38316	RCN2	YOR220W	798 nt		1.86	□□□□□ -2.11
ATG12	P38316	RTT107	YHR154W	3213 nt		1.86	□□□□□ -2.11
ATG12	P38316	MYO2	YOR326W	4725 nt		1.85	□□□□□ -2.11
ATG12	P38316	YNL034W	YNL034W	1839 nt		1.85	□□□□□ -2.11
ATG12	P38316	OCA6	YDR067C	675 nt		1.85	□□□□□ -2.11
ATG12	P38316	YFR056C	YFR056C	369 nt		1.85	□□□□□ -2.11
ATG12	P38316	PDP3	YLR455W	915 nt		1.85	□□□□□ -2.11
ATG12	P38316	VTI1	YMR197C	654 nt		1.85	□□□□□ -2.11
ATG12	P38316	NUP192	YJL039C	5052 nt		1.85	□□□□□ -2.11
ATG12	P38316	SSF1	YHR066W	1362 nt		1.85	□□□□□ -2.11
ATG12	P38316	snR9	snR9	187 nt		1.84	□□□□□ -2.11
ATG12	P38316	FMP16	YDR070C	282 nt		1.84	□□□□□ -2.11
ATG12	P38316	YDR509W	YDR509W	348 nt		1.84	□□□□□ -2.11
ATG12	P38316	GMC2	YLR445W	567 nt		1.84	□□□□□ -2.11
ATG12	P38316	YFL002W-B	YFL002W-B	1317 nt		1.84	□□□□□ -2.12
ATG12	P38316	YGR161W-A	YGR161W-A	1317 nt		1.84	□□□□□ -2.12
ATG12	P38316	YBL100W-A	YBL100W-A	1317 nt		1.84	□□□□□ -2.12
ATG12	P38316	YCL020W	YCL020W	1317 nt		1.84	□□□□□ -2.12
ATG12	P38316	IST2	YBR086C	2841 nt		1.84	□□□□□ -2.12
ATG12	P38316	VPS34	YLR240W	2628 nt		1.83	□□□□□ -2.12
ATG12	P38316	AHC2	YCR082W	387 nt		1.83	□□□□□ -2.12
ATG12	P38316	TDA2	YER071C	381 nt		1.83	□□□□□ -2.12
ATG12	P38316	STE18	YJR086W	333 nt		1.83	□□□□□ -2.12
ATG12	P38316	UBX4	YMR067C	1251 nt		1.83	□□□□□ -2.12
ATG12	P38316	YOL029C	YOL029C	606 nt		1.83	□□□□□ -2.12
ATG12	P38316	MEI5	YPL121C	669 nt		1.83	□□□□□ -2.12
ATG12	P38316	DNF3	YMR162C	4971 nt		1.83	□□□□□ -2.12
ATG12	P38316	RGA1	YOR127W	3024 nt		1.83	□□□□□ -2.12
ATG12	P38316	UBR1	YGR184C	5853 nt		1.83	□□□□□ -2.12
ATG12	P38316	MYO4	YAL029C	4416 nt		1.83	□□□□□ -2.12
ATG12	P38316	TRM3	YDL112W	4311 nt		1.82	□□□□□ -2.12
ATG12	P38316	PRK1	YIL095W	2433 nt		1.82	□□□□□ -2.12
ATG12	P38316	VPH1	YOR270C	2523 nt		1.82	□□□□□ -2.12

Retrieved 100 of 7,029 protein–RNA pairs in 26.3 ms