Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.57■□□□□ 0.082e-6■■■■□ 20
DKC1O60832 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.44■□□□□ 0.062e-6■■■■□ 20
DKC1O60832 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 02e-6■■■■□ 20
DKC1O60832 MLXIPL-202ENST00000345114 3079 ntTSL 1 (best)14.33□□□□□ -0.112e-6■■■■□ 20
DKC1O60832 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.739e-9■■■■□ 19.9
DKC1O60832 PRPF39-202ENST00000424478 3174 ntTSL 214.89□□□□□ -0.039e-9■■■■□ 19.9
DKC1O60832 PRPF39-203ENST00000477626 3507 ntTSL 213.29□□□□□ -0.289e-9■■■■□ 19.9
DKC1O60832 PRPF39-206ENST00000554429 2977 ntTSL 52.9□□□□□ -1.949e-9■■■■□ 19.9
DKC1O60832 PRPF39-205ENST00000554081 3223 ntTSL 52.76□□□□□ -1.979e-9■■■■□ 19.9
DKC1O60832 PRPF39-207ENST00000554439 2982 ntTSL 52.6□□□□□ -1.999e-9■■■■□ 19.9
DKC1O60832 PRPF39-208ENST00000554785 2121 ntTSL 21.45□□□□□ -2.189e-9■■■■□ 19.9
DKC1O60832 SNORD127-201ENST00000458892 86 ntBASIC-0.07□□□□□ -2.429e-9■■■■□ 19.9
DKC1O60832 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.493e-6■■■■□ 19.9
DKC1O60832 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.293e-6■■■■□ 19.9
DKC1O60832 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 03e-6■■■■□ 19.9
DKC1O60832 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.73■□□□□ 0.755e-7■■■■□ 19.9
DKC1O60832 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.75■□□□□ 0.595e-7■■■■□ 19.9
DKC1O60832 MCCC2-208ENST00000512218 2127 ntTSL 217.96■□□□□ 0.475e-7■■■■□ 19.9
DKC1O60832 MCCC2-201ENST00000340941 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.435e-7■■■■□ 19.9
DKC1O60832 MCCC2-207ENST00000510895 2078 ntTSL 27.93□□□□□ -1.145e-7■■■■□ 19.9
DKC1O60832 MCCC2-203ENST00000505787 774 ntTSL 54.32□□□□□ -1.725e-7■■■■□ 19.9
DKC1O60832 MCCC2-202ENST00000505435 716 ntTSL 32.88□□□□□ -1.955e-7■■■■□ 19.9
DKC1O60832 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.336e-7■■■■□ 19.9
DKC1O60832 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.376e-7■■■■□ 19.9
DKC1O60832 UBAP1-205ENST00000626262 1753 ntTSL 222.48■■□□□ 1.192e-6■■■■□ 19.8
DKC1O60832 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.1■■□□□ 1.132e-6■■■■□ 19.8
DKC1O60832 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.32■□□□□ 0.683e-6■■■■□ 19.8
DKC1O60832 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.8■□□□□ 0.62e-6■■■■□ 19.8
DKC1O60832 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.373e-6■■■■□ 19.8
DKC1O60832 FOXP1-219ENST00000610810 577 ntTSL 516.73■□□□□ 0.273e-6■■■■□ 19.8
DKC1O60832 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.192e-6■■■■□ 19.8
DKC1O60832 FOXP1-205ENST00000468577 1842 ntTSL 5 BASIC12.23□□□□□ -0.453e-6■■■■□ 19.8
DKC1O60832 MICAL3-218ENST00000584751 436 ntTSL 214.08□□□□□ -0.165e-8■■■■□ 19.8
DKC1O60832 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.76■□□□□ 0.751e-32■■■■□ 19.8
DKC1O60832 LRRC20-202ENST00000357631 2906 ntTSL 218.94■□□□□ 0.621e-32■■■■□ 19.8
DKC1O60832 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.94■□□□□ 0.621e-32■■■■□ 19.8
DKC1O60832 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.76■□□□□ 0.431e-32■■■■□ 19.8
DKC1O60832 LRRC20-207ENST00000446961 663 ntTSL 216.47■□□□□ 0.231e-32■■■■□ 19.8
DKC1O60832 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.171e-32■■■■□ 19.8
DKC1O60832 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.021e-32■■■■□ 19.8
DKC1O60832 LAMA5-202ENST00000370677 1674 ntTSL 222.2■■□□□ 1.144e-19■■■■□ 19.8
DKC1O60832 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.733e-6■■■■□ 19.8
DKC1O60832 CCDC24-207ENST00000485811 982 ntTSL 523.52■■□□□ 1.363e-6■■■■□ 19.8
DKC1O60832 CCDC24-203ENST00000463846 1230 ntTSL 1 (best)22.75■■□□□ 1.233e-6■■■■□ 19.8
DKC1O60832 CCDC24-210ENST00000490064 728 ntTSL 221.32■■□□□ 13e-6■■■■□ 19.8
DKC1O60832 CCDC24-202ENST00000460543 773 ntTSL 521.01■□□□□ 0.953e-6■■■■□ 19.8
DKC1O60832 CCDC24-211ENST00000490563 1659 ntTSL 1 (best)20.77■□□□□ 0.913e-6■■■■□ 19.8
DKC1O60832 CCDC24-204ENST00000466180 697 ntAPPRIS ALT2 TSL 320.52■□□□□ 0.883e-6■■■■□ 19.8
DKC1O60832 CCDC24-209ENST00000486504 860 ntTSL 319.19■□□□□ 0.663e-6■■■■□ 19.8
DKC1O60832 CCDC24-208ENST00000486064 2654 ntTSL 218.13■□□□□ 0.493e-6■■■■□ 19.8
DKC1O60832 CCDC24-206ENST00000479055 789 ntTSL 313.14□□□□□ -0.313e-6■■■■□ 19.8
DKC1O60832 C4orf36-204ENST00000503001 708 ntTSL 310.79□□□□□ -0.683e-6■■■■□ 19.8
DKC1O60832 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.413e-6■■■■□ 19.8
DKC1O60832 GAS5-225ENST00000454813 621 ntTSL 36.91□□□□□ -1.31e-323■■■■□ 19.7
DKC1O60832 GAS5-207ENST00000422207 643 ntTSL 26.19□□□□□ -1.421e-323■■■■□ 19.7
DKC1O60832 GAS5-217ENST00000444470 424 ntTSL 26.19□□□□□ -1.421e-323■■■■□ 19.7
DKC1O60832 GAS5-212ENST00000434796 575 ntTSL 21.36□□□□□ -2.191e-323■■■■□ 19.7
DKC1O60832 TCF12-215ENST00000560190 1183 ntTSL 1 (best)21.1■□□□□ 0.972e-8■■■■□ 19.7
DKC1O60832 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.042e-8■■■■□ 19.7
DKC1O60832 TCF12-212ENST00000559609 2252 ntTSL 213.87□□□□□ -0.192e-8■■■■□ 19.7
DKC1O60832 TCF12-202ENST00000333725 4719 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.242e-8■■■■□ 19.7
DKC1O60832 TCF12-204ENST00000438423 4786 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.282e-8■■■■□ 19.7
DKC1O60832 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.162e-8■■■■□ 19.7
DKC1O60832 CNOT1-219ENST00000569882 831 ntTSL 35.42□□□□□ -1.541e-323■■■■□ 19.6
DKC1O60832 SNORA50A-202ENST00000629536 136 ntBASIC3.57□□□□□ -1.841e-323■■■■□ 19.6
DKC1O60832 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.331e-323■■■■□ 19.6
DKC1O60832 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.95■□□□□ 0.34e-6■■■■□ 19.6
DKC1O60832 CX3CL1-201ENST00000006053 3321 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.654e-6■■■■□ 19.6
DKC1O60832 CX3CL1-202ENST00000563383 3313 ntTSL 5 BASIC10.63□□□□□ -0.714e-6■■■■□ 19.6
DKC1O60832 TPTE2P5-204ENST00000633547 791 ntTSL 312.77□□□□□ -0.371e-6■■■■□ 19.5
DKC1O60832 TPTE2P5-201ENST00000379515 450 ntTSL 5 BASIC12.77□□□□□ -0.371e-6■■■■□ 19.5
DKC1O60832 ACLY-204ENST00000537919 2974 ntTSL 2 BASIC12.96□□□□□ -0.331e-23■■■■□ 19.5
DKC1O60832 ACLY-203ENST00000393896 3682 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.51e-23■■■■□ 19.5
DKC1O60832 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.811e-23■■■■□ 19.5
DKC1O60832 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.841e-23■■■■□ 19.5
DKC1O60832 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.911e-23■■■■□ 19.5
DKC1O60832 NOL4L-201ENST00000201961 971 ntAPPRIS ALT2 TSL 326.52■■□□□ 1.845e-7■■■■□ 19.4
DKC1O60832 SNORA71B-202ENST00000439232 272 ntBASIC4.19□□□□□ -1.741e-323■■■■□ 19.4
DKC1O60832 SNORA71B-201ENST00000364546 134 nt3.28□□□□□ -1.881e-323■■■■□ 19.4
DKC1O60832 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.68■■□□□ 1.223e-6■■■■□ 19.4
DKC1O60832 NR5A1-201ENST00000373587 768 ntTSL 321.97■■□□□ 1.113e-6■■■■□ 19.4
DKC1O60832 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.993e-6■■■■□ 19.4
DKC1O60832 SREBF1-206ENST00000423161 1058 ntTSL 320.71■□□□□ 0.915e-7■■■■□ 19.3
DKC1O60832 SREBF1-211ENST00000476994 591 ntTSL 219.66■□□□□ 0.745e-7■■■■□ 19.3
DKC1O60832 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.355e-7■■■■□ 19.3
DKC1O60832 SREBF1-222ENST00000583732 580 ntTSL 416.93■□□□□ 0.35e-7■■■■□ 19.3
DKC1O60832 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.015e-7■■■■□ 19.3
DKC1O60832 MGAT1-210ENST00000506033 464 ntTSL 232.07■■■□□ 2.721e-7■■■■□ 19.3
DKC1O60832 MGAT1-213ENST00000506889 1104 ntTSL 226.01■■□□□ 1.751e-7■■■■□ 19.3
DKC1O60832 ARPC1B-218ENST00000484375 785 ntTSL 325.42■■□□□ 1.661e-7■■■■□ 19.3
DKC1O60832 ARPC1B-204ENST00000418347 563 ntTSL 425.05■■□□□ 1.61e-7■■■■□ 19.3
DKC1O60832 SCARB1-206ENST00000539320 720 ntTSL 224.92■■□□□ 1.581e-7■■■■□ 19.3
DKC1O60832 SCARB1-210ENST00000545493 581 ntTSL 223.65■■□□□ 1.381e-7■■■■□ 19.3
DKC1O60832 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.3■■□□□ 1.321e-7■■■■□ 19.3
DKC1O60832 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.295e-6■■■■□ 19.3
DKC1O60832 ARPC1B-219ENST00000484600 582 ntTSL 222.8■■□□□ 1.241e-7■■■■□ 19.3
DKC1O60832 ARPC1B-212ENST00000455009 580 ntTSL 322.69■■□□□ 1.221e-7■■■■□ 19.3
DKC1O60832 ARPC1B-205ENST00000427217 545 ntTSL 322.56■■□□□ 1.21e-7■■■■□ 19.3
DKC1O60832 ARPC1B-206ENST00000429246 348 ntTSL 522.56■■□□□ 1.21e-7■■■■□ 19.3
DKC1O60832 ARPC1B-207ENST00000431816 581 ntTSL 222.56■■□□□ 1.21e-7■■■■□ 19.3
Retrieved 100 of 8,567 protein–RNA pairs in 144.2 ms