RNA–Protein interactions for RNA: ENST00000395011.5

LRRC20-206, Transcript of leucine rich repeat containing 20, humanhuman

TSL 4 BASIC

Gene LRRC20, Length 2,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC20-206ENST00000395011 NISCHQ9Y2I1 1504 aa35.64■■■■□ 3.3
LRRC20-206ENST00000395011 CCDC180Q9P1Z9 1646 aa30.7■■■□□ 2.51
LRRC20-206ENST00000395011 ZCCHC6Q5VYS8 1495 aaKnown RBP29.97■■■□□ 2.39
LRRC20-206ENST00000395011 DCAF8L2P0C7V8 631 aa29.79■■■□□ 2.36
LRRC20-206ENST00000395011 SHROOM4Q9ULL8 1493 aa29.76■■■□□ 2.36
LRRC20-206ENST00000395011 DCAF1Q9Y4B6 1507 aa29.27■■■□□ 2.28
LRRC20-206ENST00000395011 ABCC9O60706 1549 aa29.06■■■□□ 2.24
LRRC20-206ENST00000395011 SUPT5HO00267 1087 aaKnown RBP28.85■■■□□ 2.21
LRRC20-206ENST00000395011 MYO15BQ96JP2 1530 aa28.73■■■□□ 2.19
LRRC20-206ENST00000395011 SCRIBQ14160 1630 aa28.59■■■□□ 2.17
LRRC20-206ENST00000395011 NACADO15069 1562 aa28.58■■■□□ 2.16
LRRC20-206ENST00000395011 RB1CC1Q8TDY2 1594 aa28.28■■■□□ 2.12
LRRC20-206ENST00000395011 RSF1Q96T23 1441 aaPredicted RBP27.88■■■□□ 2.05
LRRC20-206ENST00000395011 CECR2Q9BXF3 1484 aa27.81■■■□□ 2.04
LRRC20-206ENST00000395011 UNC13AQ9UPW8 1703 aa27.78■■■□□ 2.04
LRRC20-206ENST00000395011 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
LRRC20-206ENST00000395011 MROH2BQ7Z745 1585 aa27.64■■■□□ 2.02
LRRC20-206ENST00000395011 PABPN1Q86U42 306 aaKnown RBP eCLIP27.62■■■□□ 2.01
LRRC20-206ENST00000395011 BICRAQ9NZM4 1560 aa27.47■■□□□ 1.99
LRRC20-206ENST00000395011 WIZO95785 1651 aa27.45■■□□□ 1.99
LRRC20-206ENST00000395011 BAZ1AQ9NRL2 1556 aaPredicted RBP27.45■■□□□ 1.99
LRRC20-206ENST00000395011 SMARCA4P51532 1647 aa27.3■■□□□ 1.96
LRRC20-206ENST00000395011 TOP2AP11388 1531 aaKnown RBP27.04■■□□□ 1.92
LRRC20-206ENST00000395011 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
LRRC20-206ENST00000395011 CCDC88BA6NC98 1476 aa26.89■■□□□ 1.9
LRRC20-206ENST00000395011 SMARCA2P51531 1590 aa26.85■■□□□ 1.89
LRRC20-206ENST00000395011 PEG3Q9GZU2 1588 aa26.82■■□□□ 1.88
LRRC20-206ENST00000395011 LOC105371045A0A1W2PR82 267 aa26.82■■□□□ 1.88
LRRC20-206ENST00000395011 ATAD2BQ9ULI0 1458 aa26.79■■□□□ 1.88
LRRC20-206ENST00000395011 EIF4G1Q04637 1599 aaKnown RBP26.7■■□□□ 1.86
LRRC20-206ENST00000395011 BAZ1BQ9UIG0 1483 aaKnown RBP26.69■■□□□ 1.86
LRRC20-206ENST00000395011 FAM9AQ8IZU1 332 aaPredicted RBP26.68■■□□□ 1.86
LRRC20-206ENST00000395011 ABCC8Q09428 1581 aa26.55■■□□□ 1.84
LRRC20-206ENST00000395011 EHMT2Q96KQ7 1210 aa26.45■■□□□ 1.83
LRRC20-206ENST00000395011 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
LRRC20-206ENST00000395011 HMGXB3Q12766 1538 aa26.36■■□□□ 1.81
LRRC20-206ENST00000395011 PCGF6Q9BYE7 350 aa26.25■■□□□ 1.79
LRRC20-206ENST00000395011 WRNQ14191 1432 aaPredicted RBP eCLIP26.24■■□□□ 1.792e-8■■■■■ 75.2
LRRC20-206ENST00000395011 CC2D2AQ9P2K1 1620 aa26.18■■□□□ 1.78
LRRC20-206ENST00000395011 SOGA1O94964 1423 aa26.15■■□□□ 1.78
LRRC20-206ENST00000395011 SYNJ1O43426 1573 aa26.1■■□□□ 1.77
LRRC20-206ENST00000395011 RUSC2Q8N2Y8 1516 aa26.05■■□□□ 1.76
LRRC20-206ENST00000395011 CFTRP13569 1480 aa25.98■■□□□ 1.75
LRRC20-206ENST00000395011 CSRNP3Q8WYN3 585 aa25.98■■□□□ 1.75
LRRC20-206ENST00000395011 EEA1Q15075 1411 aa25.93■■□□□ 1.74
LRRC20-206ENST00000395011 TRIM26Q12899 539 aaPredicted RBP25.88■■□□□ 1.73
LRRC20-206ENST00000395011 TOP2BQ02880 1626 aa25.87■■□□□ 1.73
LRRC20-206ENST00000395011 CADPSQ9ULU8 1353 aa25.86■■□□□ 1.73
LRRC20-206ENST00000395011 HRCP23327 699 aa25.83■■□□□ 1.73
LRRC20-206ENST00000395011 UBTFP17480 764 aaKnown RBP25.82■■□□□ 1.72
LRRC20-206ENST00000395011 BIVM-ERCC5R4GMW8 1640 aa25.79■■□□□ 1.72
LRRC20-206ENST00000395011 CUX1P39880 1505 aa25.79■■□□□ 1.72
LRRC20-206ENST00000395011 PRDM2Q13029 1718 aa25.74■■□□□ 1.71
LRRC20-206ENST00000395011 TNIKQ9UKE5 1360 aa25.7■■□□□ 1.7
LRRC20-206ENST00000395011 GOLGA3Q08378 1498 aa25.7■■□□□ 1.7
LRRC20-206ENST00000395011 DNAJC5BQ9UF47 199 aa25.68■■□□□ 1.7
LRRC20-206ENST00000395011 CEP162Q5TB80 1403 aa25.67■■□□□ 1.7
LRRC20-206ENST00000395011 PPARGC1BQ86YN6 1023 aaKnown RBP25.65■■□□□ 1.7
LRRC20-206ENST00000395011 CEP164Q9UPV0 1460 aa25.64■■□□□ 1.7
LRRC20-206ENST00000395011 NESP48681 1621 aa25.64■■□□□ 1.69
LRRC20-206ENST00000395011 FANCD2Q9BXW9 1451 aa25.6■■□□□ 1.69
LRRC20-206ENST00000395011 KIF21BO75037 1637 aa25.59■■□□□ 1.69
LRRC20-206ENST00000395011 RAPGEF2Q9Y4G8 1499 aa25.55■■□□□ 1.68
LRRC20-206ENST00000395011 KIF27Q86VH2 1401 aa25.51■■□□□ 1.68
LRRC20-206ENST00000395011 RANGAP1P46060 587 aaPredicted RBP25.48■■□□□ 1.67
LRRC20-206ENST00000395011 FGD5Q6ZNL6 1462 aa25.47■■□□□ 1.67
LRRC20-206ENST00000395011 LAMC3Q9Y6N6 1575 aa25.43■■□□□ 1.66
LRRC20-206ENST00000395011 CUX2O14529 1486 aa25.42■■□□□ 1.66
LRRC20-206ENST00000395011 PRXQ9BXM0 1461 aa25.4■■□□□ 1.66
LRRC20-206ENST00000395011 TTBK1Q5TCY1 1321 aaPredicted RBP25.39■■□□□ 1.65
LRRC20-206ENST00000395011 CLIP1P30622 1438 aa25.37■■□□□ 1.65
LRRC20-206ENST00000395011 DNMBPQ6XZF7 1577 aa25.35■■□□□ 1.65
LRRC20-206ENST00000395011 TOPBP1Q92547 1522 aa25.34■■□□□ 1.65
LRRC20-206ENST00000395011 ERICH3Q5RHP9 1530 aa25.32■■□□□ 1.64
LRRC20-206ENST00000395011 PDS5BQ9NTI5 1447 aa25.31■■□□□ 1.64
LRRC20-206ENST00000395011 RAD54L2Q9Y4B4 1467 aa25.29■■□□□ 1.64
LRRC20-206ENST00000395011 IGF1RP08069 1367 aa25.29■■□□□ 1.64
LRRC20-206ENST00000395011 POLA1P09884 1462 aaPredicted RBP25.27■■□□□ 1.64
LRRC20-206ENST00000395011 URB2Q14146 1524 aaKnown RBP25.25■■□□□ 1.63
LRRC20-206ENST00000395011 KIF21AQ7Z4S6 1674 aa25.21■■□□□ 1.63
LRRC20-206ENST00000395011 CARMIL1Q5VZK9 1371 aa25.19■■□□□ 1.62
LRRC20-206ENST00000395011 ABCA10Q8WWZ4 1543 aa25.16■■□□□ 1.62
LRRC20-206ENST00000395011 VPS8Q8N3P4 1428 aa25.15■■□□□ 1.62
LRRC20-206ENST00000395011 APLP2Q06481 763 aa25.09■■□□□ 1.61
LRRC20-206ENST00000395011 TDRD9Q8NDG6 1382 aaKnown RBP25.06■■□□□ 1.6
LRRC20-206ENST00000395011 ZEB1P37275 1124 aaPredicted RBP25.05■■□□□ 1.6
LRRC20-206ENST00000395011 ARAP1Q96P48 1450 aa25.03■■□□□ 1.6
LRRC20-206ENST00000395011 WDR97A6NE52 1622 aa24.97■■□□□ 1.59
LRRC20-206ENST00000395011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.97■■□□□ 1.59
LRRC20-206ENST00000395011 ARHGAP35Q9NRY4 1499 aa24.96■■□□□ 1.59
LRRC20-206ENST00000395011 MRC2Q9UBG0 1479 aa24.94■■□□□ 1.58
LRRC20-206ENST00000395011 GAPVD1Q14C86 1478 aa24.94■■□□□ 1.58
LRRC20-206ENST00000395011 CUL7Q14999 1698 aa24.9■■□□□ 1.58
LRRC20-206ENST00000395011 ABCA5Q8WWZ7 1642 aa24.89■■□□□ 1.58
LRRC20-206ENST00000395011 CCER1Q8TC90 406 aaPredicted RBP24.88■■□□□ 1.57
LRRC20-206ENST00000395011 TARBP1Q13395 1621 aaKnown RBP24.87■■□□□ 1.57
LRRC20-206ENST00000395011 P3H3Q8IVL6 736 aa24.86■■□□□ 1.57
LRRC20-206ENST00000395011 ERCC6Q03468 1493 aa24.84■■□□□ 1.57
LRRC20-206ENST00000395011 AQRO60306 1485 aaKnown RBP eCLIP24.8■■□□□ 1.56
LRRC20-206ENST00000395011 KANK4Q5T7N3 995 aaPredicted RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms