RNA–Protein interactions for RNA: ENST00000629536.1

SNORA50A-202, Transcript of small nucleolar RNA, H/ACA box 50A, humanhuman

BASIC

Gene SNORA50A, Length 136 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA50A-202ENST00000629536 MYT1Q01538 1121 aa6.38□□□□□ -1.39
SNORA50A-202ENST00000629536 SLC24A1O60721 1099 aa6.31□□□□□ -1.4
SNORA50A-202ENST00000629536 TTBK1Q5TCY1 1321 aaPredicted RBP6.28□□□□□ -1.4
SNORA50A-202ENST00000629536 PELP1Q8IZL8 1130 aaKnown RBP6.28□□□□□ -1.4
SNORA50A-202ENST00000629536 ERICH6Q7L0X2 663 aa5.95□□□□□ -1.46
SNORA50A-202ENST00000629536 DAXXQ9UER7 740 aaPredicted RBP5.95□□□□□ -1.46
SNORA50A-202ENST00000629536 APLP2Q06481 763 aa5.88□□□□□ -1.47
SNORA50A-202ENST00000629536 PRKCSHP14314 528 aaPredicted RBP5.74□□□□□ -1.49
SNORA50A-202ENST00000629536 NCBP3Q53F19 620 aaKnown RBP5.63□□□□□ -1.51
SNORA50A-202ENST00000629536 ARXQ96QS3 562 aa5.56□□□□□ -1.52
SNORA50A-202ENST00000629536 RANGAP1P46060 587 aaPredicted RBP5.51□□□□□ -1.53
SNORA50A-202ENST00000629536 EIF5BO60841 1220 aaKnown RBP5.48□□□□□ -1.53
SNORA50A-202ENST00000629536 AMER1Q5JTC6 1135 aaPredicted RBP5.44□□□□□ -1.54
SNORA50A-202ENST00000629536 EHMT2Q96KQ7 1210 aa5.4□□□□□ -1.54
SNORA50A-202ENST00000629536 RTN4Q9NQC3 1192 aaKnown RBP5.4□□□□□ -1.54
SNORA50A-202ENST00000629536 BCL11AQ9H165 835 aa5.39□□□□□ -1.55
SNORA50A-202ENST00000629536 HOMEZQ8IX15 550 aa5.34□□□□□ -1.55
SNORA50A-202ENST00000629536 PLPPR3Q6T4P5 718 aa5.3□□□□□ -1.56
SNORA50A-202ENST00000629536 TIMELESSQ9UNS1 1208 aa5.26□□□□□ -1.57
SNORA50A-202ENST00000629536 FAM9AQ8IZU1 332 aaPredicted RBP5.23□□□□□ -1.57
SNORA50A-202ENST00000629536 CENPBP07199 599 aaPredicted RBP5.2□□□□□ -1.58
SNORA50A-202ENST00000629536 UBE2Q2Q8WVN8 375 aa5.2□□□□□ -1.58
SNORA50A-202ENST00000629536 TULP1O00294 542 aaPredicted RBP5.17□□□□□ -1.58
SNORA50A-202ENST00000629536 KLHL34Q8N239 644 aa5.17□□□□□ -1.58
SNORA50A-202ENST00000629536 PODXL2Q9NZ53 605 aa5.16□□□□□ -1.58
SNORA50A-202ENST00000629536 TAOK2Q9UL54 1235 aa5.15□□□□□ -1.59
SNORA50A-202ENST00000629536 BCANQ96GW7 911 aa5.14□□□□□ -1.59
SNORA50A-202ENST00000629536 FBXO3Q9UK99 471 aa5.13□□□□□ -1.59
SNORA50A-202ENST00000629536 PLEKHG5O94827 1062 aa5.12□□□□□ -1.59
SNORA50A-202ENST00000629536 HRCP23327 699 aa5.12□□□□□ -1.59
SNORA50A-202ENST00000629536 CHIC1Q5VXU3 224 aa5.12□□□□□ -1.59
SNORA50A-202ENST00000629536 DCAF8L2P0C7V8 631 aa5.11□□□□□ -1.59
SNORA50A-202ENST00000629536 NEFLP07196 543 aa5.1□□□□□ -1.59
SNORA50A-202ENST00000629536 NPM2Q86SE8 214 aaKnown RBP5.1□□□□□ -1.59
SNORA50A-202ENST00000629536 SCAF1Q9H7N4 1312 aaKnown RBP5.08□□□□□ -1.6
SNORA50A-202ENST00000629536 PDIA4P13667 645 aaKnown RBP5.07□□□□□ -1.6
SNORA50A-202ENST00000629536 KCNA4P22459 653 aa5.07□□□□□ -1.6
SNORA50A-202ENST00000629536 CDK11AQ9UQ88 783 aaPredicted RBP5.07□□□□□ -1.6
SNORA50A-202ENST00000629536 GTF3C3Q9Y5Q9 886 aa5.04□□□□□ -1.6
SNORA50A-202ENST00000629536 ANP32EQ9BTT0 268 aa5.03□□□□□ -1.6
SNORA50A-202ENST00000629536 TPRNQ4KMQ1 711 aa5.02□□□□□ -1.61
SNORA50A-202ENST00000629536 PKNOX2Q96KN3 472 aa5.02□□□□□ -1.61
SNORA50A-202ENST00000629536 PDE4CQ08493 712 aa5.01□□□□□ -1.61
SNORA50A-202ENST00000629536 TAF7LQ5H9L4 462 aa5.01□□□□□ -1.61
SNORA50A-202ENST00000629536 C14orf37Q86TY3 774 aa5.01□□□□□ -1.61
SNORA50A-202ENST00000629536 CSRNP3Q8WYN3 585 aa4.99□□□□□ -1.61
SNORA50A-202ENST00000629536 ERICH6BQ5W0A0 696 aa4.98□□□□□ -1.61
SNORA50A-202ENST00000629536 HMGB1P09429 215 aaKnown RBP4.97□□□□□ -1.61
SNORA50A-202ENST00000629536 BRD2P25440 801 aaKnown RBP4.96□□□□□ -1.62
SNORA50A-202ENST00000629536 MYT1LQ9UL68 1186 aa4.96□□□□□ -1.62
SNORA50A-202ENST00000629536 ZNF326Q5BKZ1 582 aaKnown RBP4.95□□□□□ -1.62
SNORA50A-202ENST00000629536 CDK11BP21127 795 aaKnown RBP4.94□□□□□ -1.62
SNORA50A-202ENST00000629536 HSP90B1P14625 803 aaKnown RBP4.93□□□□□ -1.62
SNORA50A-202ENST00000629536 PLCB2Q00722 1185 aa4.93□□□□□ -1.62
SNORA50A-202ENST00000629536 TMEM132AQ24JP5 1023 aa4.93□□□□□ -1.62
SNORA50A-202ENST00000629536 CNKSR2Q8WXI2 1034 aa4.93□□□□□ -1.62
SNORA50A-202ENST00000629536 FGD1P98174 961 aa4.92□□□□□ -1.62
SNORA50A-202ENST00000629536 CHMP4AQ9BY43 222 aa4.9□□□□□ -1.63
SNORA50A-202ENST00000629536 BCCIPQ9P287 314 aaKnown RBP eCLIP4.9□□□□□ -1.63
SNORA50A-202ENST00000629536 ANO8Q9HCE9 1232 aaPredicted RBP4.89□□□□□ -1.63
SNORA50A-202ENST00000629536 ACIN1Q9UKV3 1341 aaKnown RBP4.88□□□□□ -1.63
SNORA50A-202ENST00000629536 GLIPR1L2Q4G1C9 344 aa4.86□□□□□ -1.63
SNORA50A-202ENST00000629536 RSPH4AQ5TD94 716 aa4.86□□□□□ -1.63
SNORA50A-202ENST00000629536 SAMD1Q6SPF0 538 aaPredicted RBP4.85□□□□□ -1.63
SNORA50A-202ENST00000629536 CLSPNQ9HAW4 1339 aa4.84□□□□□ -1.63
SNORA50A-202ENST00000629536 ZEB1P37275 1124 aaPredicted RBP4.84□□□□□ -1.63
SNORA50A-202ENST00000629536 HAP1P54257 671 aaPredicted RBP4.84□□□□□ -1.63
SNORA50A-202ENST00000629536 TRIM26Q12899 539 aaPredicted RBP4.84□□□□□ -1.63
SNORA50A-202ENST00000629536 ARID3AQ99856 593 aa4.84□□□□□ -1.63
SNORA50A-202ENST00000629536 LOC105371045A0A1W2PR82 267 aa4.83□□□□□ -1.64
SNORA50A-202ENST00000629536 BCL11BQ9C0K0 894 aaPredicted RBP4.82□□□□□ -1.64
SNORA50A-202ENST00000629536 RSPH6AQ9H0K4 717 aa4.82□□□□□ -1.64
SNORA50A-202ENST00000629536 VSIG10Q8N0Z9 540 aa4.81□□□□□ -1.64
SNORA50A-202ENST00000629536 AAMPQ13685 434 aa4.8□□□□□ -1.64
SNORA50A-202ENST00000629536 SHROOM4Q9ULL8 1493 aa4.8□□□□□ -1.64
SNORA50A-202ENST00000629536 DHX37Q8IY37 1157 aaKnown RBP4.78□□□□□ -1.64
SNORA50A-202ENST00000629536 PUS7Q96PZ0 661 aaKnown RBP4.78□□□□□ -1.64
SNORA50A-202ENST00000629536 NAP1L5Q96NT1 182 aaPredicted RBP4.76□□□□□ -1.65
SNORA50A-202ENST00000629536 CCDC9Q9Y3X0 531 aaKnown RBP4.74□□□□□ -1.65
SNORA50A-202ENST00000629536 RBM10P98175 930 aaKnown RBP4.72□□□□□ -1.65
SNORA50A-202ENST00000629536 YTHDC1Q96MU7 727 aaKnown RBP4.72□□□□□ -1.65
SNORA50A-202ENST00000629536 SALL2Q9Y467 1007 aaPredicted RBP4.72□□□□□ -1.65
SNORA50A-202ENST00000629536 SUPT5HO00267 1087 aaKnown RBP4.71□□□□□ -1.66
SNORA50A-202ENST00000629536 UBTFP17480 764 aaKnown RBP4.71□□□□□ -1.66
SNORA50A-202ENST00000629536 SLC4A1APQ9BWU0 796 aaKnown RBP4.71□□□□□ -1.66
SNORA50A-202ENST00000629536 ZMYND15Q9H091 742 aa4.71□□□□□ -1.66
SNORA50A-202ENST00000629536 CLSTN1O94985 981 aa4.7□□□□□ -1.66
SNORA50A-202ENST00000629536 NPM1P06748 294 aaKnown RBP eCLIP4.7□□□□□ -1.66
SNORA50A-202ENST00000629536 NEUROD1Q13562 356 aa4.7□□□□□ -1.66
SNORA50A-202ENST00000629536 TICAM2Q86XR7 235 aa4.7□□□□□ -1.66
SNORA50A-202ENST00000629536 POLR3GLQ9BT43 218 aa4.69□□□□□ -1.66
SNORA50A-202ENST00000629536 AEBP2Q6ZN18 517 aaPredicted RBP4.68□□□□□ -1.66
SNORA50A-202ENST00000629536 IGSF3O75054 1194 aa4.67□□□□□ -1.66
SNORA50A-202ENST00000629536 CHRM1P11229 460 aaPredicted RBP4.67□□□□□ -1.66
SNORA50A-202ENST00000629536 NCLP19338 710 aaKnown RBP4.67□□□□□ -1.66
SNORA50A-202ENST00000629536 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.67□□□□□ -1.66
SNORA50A-202ENST00000629536 DEKP35659 375 aaKnown RBP4.66□□□□□ -1.66
SNORA50A-202ENST00000629536 PAXIP1Q6ZW49 1069 aaPredicted RBP4.66□□□□□ -1.66
SNORA50A-202ENST00000629536 TEX2Q8IWB9 1127 aa4.66□□□□□ -1.66
SNORA50A-202ENST00000629536 PTMSP20962 102 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms