RNA–Protein interactions for RNA: ENST00000506889.1

MGAT1-213, Transcript of mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, humanhuman

TSL 2

Gene MGAT1, Length 1,104 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MGAT1-213ENST00000506889 NISCHQ9Y2I1 1504 aa56.68■■■■■ 6.66
MGAT1-213ENST00000506889 CCDC180Q9P1Z9 1646 aa50.46■■■■■ 5.67
MGAT1-213ENST00000506889 ABCC9O60706 1549 aa49.95■■■■■ 5.59
MGAT1-213ENST00000506889 RB1CC1Q8TDY2 1594 aa47.81■■■■■ 5.24
MGAT1-213ENST00000506889 DCAF8L2P0C7V8 631 aa47.73■■■■■ 5.23
MGAT1-213ENST00000506889 NACADO15069 1562 aa47.66■■■■■ 5.22
MGAT1-213ENST00000506889 MYO15BQ96JP2 1530 aa47.24■■■■■ 5.15
MGAT1-213ENST00000506889 ZCCHC6Q5VYS8 1495 aaKnown RBP47.1■■■■■ 5.13
MGAT1-213ENST00000506889 DCAF1Q9Y4B6 1507 aa46.86■■■■■ 5.09
MGAT1-213ENST00000506889 PABPN1Q86U42 306 aaKnown RBP eCLIP46.68■■■■■ 5.06
MGAT1-213ENST00000506889 UNC13AQ9UPW8 1703 aa46.48■■■■■ 5.03
MGAT1-213ENST00000506889 BICRAQ9NZM4 1560 aa46.3■■■■■ 5
MGAT1-213ENST00000506889 DNAJC5BQ9UF47 199 aa46.28■■■■■ 5
MGAT1-213ENST00000506889 SCRIBQ14160 1630 aa46.06■■■■■ 4.96
MGAT1-213ENST00000506889 SHROOM4Q9ULL8 1493 aa45.88■■■■■ 4.94
MGAT1-213ENST00000506889 EIF4G1Q04637 1599 aaKnown RBP45.18■■■■■ 4.82
MGAT1-213ENST00000506889 CC2D2AQ9P2K1 1620 aa45.08■■■■■ 4.81
MGAT1-213ENST00000506889 CECR2Q9BXF3 1484 aa44.95■■■■■ 4.79
MGAT1-213ENST00000506889 NCAPD3P42695 1498 aa44.03■■■■■ 4.64
MGAT1-213ENST00000506889 SMARCA4P51532 1647 aa44.01■■■■■ 4.64
MGAT1-213ENST00000506889 ATAD2BQ9ULI0 1458 aa43.98■■■■■ 4.63
MGAT1-213ENST00000506889 BAZ1AQ9NRL2 1556 aaPredicted RBP43.96■■■■■ 4.63
MGAT1-213ENST00000506889 SMARCA2P51531 1590 aa43.88■■■■■ 4.61
MGAT1-213ENST00000506889 HMGXB3Q12766 1538 aa43.7■■■■■ 4.59
MGAT1-213ENST00000506889 MROH2BQ7Z745 1585 aa43.66■■■■■ 4.58
MGAT1-213ENST00000506889 PEG3Q9GZU2 1588 aa43.59■■■■■ 4.57
MGAT1-213ENST00000506889 BAZ1BQ9UIG0 1483 aaKnown RBP43.59■■■■■ 4.57
MGAT1-213ENST00000506889 ERCC6Q03468 1493 aa43.13■■■■■ 4.5
MGAT1-213ENST00000506889 WIZO95785 1651 aa43.1■■■■■ 4.49
MGAT1-213ENST00000506889 RSF1Q96T23 1441 aaPredicted RBP43.05■■■■■ 4.48
MGAT1-213ENST00000506889 NESP48681 1621 aa43.05■■■■■ 4.48
MGAT1-213ENST00000506889 LAMC3Q9Y6N6 1575 aa42.87■■■■■ 4.45
MGAT1-213ENST00000506889 CUX2O14529 1486 aa42.81■■■■■ 4.44
MGAT1-213ENST00000506889 CADPSQ9ULU8 1353 aa42.77■■■■■ 4.44
MGAT1-213ENST00000506889 PDS5BQ9NTI5 1447 aa42.72■■■■■ 4.43
MGAT1-213ENST00000506889 TOP2AP11388 1531 aaKnown RBP42.67■■■■■ 4.42
MGAT1-213ENST00000506889 THOC2Q8NI27 1593 aaKnown RBP42.41■■■■■ 4.38
MGAT1-213ENST00000506889 KIF21AQ7Z4S6 1674 aa42.39■■■■■ 4.38
MGAT1-213ENST00000506889 CFTRP13569 1480 aa42.37■■■■■ 4.37
MGAT1-213ENST00000506889 FANCD2Q9BXW9 1451 aa42.23■■■■■ 4.35
MGAT1-213ENST00000506889 MRC2Q9UBG0 1479 aa42.23■■■■■ 4.35
MGAT1-213ENST00000506889 CCDC88BA6NC98 1476 aa42.23■■■■■ 4.35
MGAT1-213ENST00000506889 CEP164Q9UPV0 1460 aa42.22■■■■■ 4.35
MGAT1-213ENST00000506889 DNAJC5Q9H3Z4 198 aa42.09■■■■■ 4.33
MGAT1-213ENST00000506889 WDR62O43379 1518 aa42.06■■■■■ 4.32
MGAT1-213ENST00000506889 URB2Q14146 1524 aaKnown RBP41.79■■■■■ 4.28
MGAT1-213ENST00000506889 PRDM2Q13029 1718 aa41.75■■■■■ 4.27
MGAT1-213ENST00000506889 SUPT5HO00267 1087 aaKnown RBP41.74■■■■■ 4.27
MGAT1-213ENST00000506889 ABCC8Q09428 1581 aa41.5■■■■■ 4.23
MGAT1-213ENST00000506889 TOPBP1Q92547 1522 aa41.48■■■■■ 4.23
MGAT1-213ENST00000506889 IFT140Q96RY7 1462 aa41.37■■■■■ 4.21
MGAT1-213ENST00000506889 DNMBPQ6XZF7 1577 aa41.36■■■■■ 4.21
MGAT1-213ENST00000506889 ZNF608Q9ULD9 1512 aaPredicted RBP41.18■■■■■ 4.18
MGAT1-213ENST00000506889 POLA1P09884 1462 aaPredicted RBP41.1■■■■■ 4.17
MGAT1-213ENST00000506889 OSCARQ8IYS5 282 aa41.07■■■■■ 4.17
MGAT1-213ENST00000506889 SOGA1O94964 1423 aa41■■■■■ 4.15
MGAT1-213ENST00000506889 TARBP1Q13395 1621 aaKnown RBP40.98■■■■■ 4.15
MGAT1-213ENST00000506889 CUX1P39880 1505 aa40.98■■■■■ 4.15
MGAT1-213ENST00000506889 RAD54L2Q9Y4B4 1467 aa40.95■■■■■ 4.15
MGAT1-213ENST00000506889 FGD5Q6ZNL6 1462 aa40.94■■■■■ 4.14
MGAT1-213ENST00000506889 AQRO60306 1485 aaKnown RBP eCLIP40.93■■■■■ 4.14
MGAT1-213ENST00000506889 EIF4G3O43432 1585 aaKnown RBP40.91■■■■■ 4.14
MGAT1-213ENST00000506889 TDRD9Q8NDG6 1382 aaKnown RBP40.82■■■■■ 4.12
MGAT1-213ENST00000506889 WDR97A6NE52 1622 aa40.67■■■■■ 4.1
MGAT1-213ENST00000506889 FBLN2P98095 1184 aa40.64■■■■■ 4.1
MGAT1-213ENST00000506889 WRNQ14191 1432 aaPredicted RBP eCLIP40.63■■■■■ 4.09
MGAT1-213ENST00000506889 GRIN2BQ13224 1484 aa40.54■■■■■ 4.08
MGAT1-213ENST00000506889 TRIM41Q8WV44 630 aa40.54■■■■■ 4.08
MGAT1-213ENST00000506889 ABCA10Q8WWZ4 1543 aa40.52■■■■■ 4.08
MGAT1-213ENST00000506889 SNAPC4Q5SXM2 1469 aa40.51■■■■■ 4.08
MGAT1-213ENST00000506889 TOP2BQ02880 1626 aa40.49■■■■■ 4.07
MGAT1-213ENST00000506889 GAPVD1Q14C86 1478 aa40.48■■■■■ 4.07
MGAT1-213ENST00000506889 CHMP7Q8WUX9 453 aaPredicted RBP40.46■■■■■ 4.07
MGAT1-213ENST00000506889 MAGI1Q96QZ7 1491 aaPredicted RBP40.45■■■■■ 4.07
MGAT1-213ENST00000506889 SYNJ1O43426 1573 aa40.44■■■■■ 4.06
MGAT1-213ENST00000506889 BIVM-ERCC5R4GMW8 1640 aa40.43■■■■■ 4.06
MGAT1-213ENST00000506889 CHD1O14646 1710 aa40.4■■■■■ 4.06
MGAT1-213ENST00000506889 SYNJ2O15056 1496 aa40.32■■■■■ 4.04
MGAT1-213ENST00000506889 ABCA5Q8WWZ7 1642 aa40.31■■■■■ 4.04
MGAT1-213ENST00000506889 ARHGEF11O15085 1522 aa40.26■■■■■ 4.03
MGAT1-213ENST00000506889 RIMBP3CA6NJZ7 1639 aa40.24■■■■■ 4.03
MGAT1-213ENST00000506889 RIMBP3BA6NNM3 1639 aa40.24■■■■■ 4.03
MGAT1-213ENST00000506889 RIMBP3Q9UFD9 1639 aa40.24■■■■■ 4.03
MGAT1-213ENST00000506889 PBRM1Q86U86 1689 aa40.23■■■■■ 4.03
MGAT1-213ENST00000506889 CLASP1Q7Z460 1538 aa40.06■■■■■ 4
MGAT1-213ENST00000506889 CYB5RLQ6IPT4 315 aa40.05■■■■■ 4
MGAT1-213ENST00000506889 ERICH3Q5RHP9 1530 aa40.02■■■■■ 4
MGAT1-213ENST00000506889 FHAD1B1AJZ9 1412 aa40.02■■■■■ 4
MGAT1-213ENST00000506889 GRIN2AQ12879 1464 aa39.98■■■■□ 3.99
MGAT1-213ENST00000506889 ADAMTS12P58397 1594 aa39.97■■■■□ 3.99
MGAT1-213ENST00000506889 ARAP1Q96P48 1450 aa39.9■■■■□ 3.98
MGAT1-213ENST00000506889 KIF27Q86VH2 1401 aa39.84■■■■□ 3.97
MGAT1-213ENST00000506889 NUP160Q12769 1436 aa39.83■■■■□ 3.97
MGAT1-213ENST00000506889 IGF1RP08069 1367 aa39.74■■■■□ 3.95
MGAT1-213ENST00000506889 CEP170Q5SW79 1584 aa39.74■■■■□ 3.95
MGAT1-213ENST00000506889 JPH4Q96JJ6 628 aa39.54■■■■□ 3.92
MGAT1-213ENST00000506889 CUL7Q14999 1698 aa39.51■■■■□ 3.92
MGAT1-213ENST00000506889 CARMIL1Q5VZK9 1371 aa39.5■■■■□ 3.91
MGAT1-213ENST00000506889 SHROOM2Q13796 1616 aa39.47■■■■□ 3.91
MGAT1-213ENST00000506889 ERCC6L2Q5T890 1561 aa39.46■■■■□ 3.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms