Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHA13Q9Y5I0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA13Q9Y5I0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA13Q9Y5I0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHA13Q9Y5I0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA13Q9Y5I0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA13Q9Y5I0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA13Q9Y5I0 AC008406.3-201ENST00000620001 1374 ntBASIC21.92■■□□□ 1.1
PCDHA13Q9Y5I0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA13Q9Y5I0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHA13Q9Y5I0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHA13Q9Y5I0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHA13Q9Y5I0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA13Q9Y5I0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA13Q9Y5I0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 TCF3P1-201ENST00000423021 1937 ntBASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 AL136967.2-201ENST00000623968 743 ntBASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.91■■□□□ 1.1
PCDHA13Q9Y5I0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHA13Q9Y5I0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA13Q9Y5I0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA13Q9Y5I0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.9■■□□□ 1.1
PCDHA13Q9Y5I0 AC091305.1-201ENST00000479476 895 ntBASIC21.9■■□□□ 1.1
PCDHA13Q9Y5I0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHA13Q9Y5I0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA13Q9Y5I0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PCDHA13Q9Y5I0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA13Q9Y5I0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
PCDHA13Q9Y5I0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA13Q9Y5I0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA13Q9Y5I0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.89■■□□□ 1.1
PCDHA13Q9Y5I0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHA13Q9Y5I0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHA13Q9Y5I0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.89■■□□□ 1.1
PCDHA13Q9Y5I0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHA13Q9Y5I0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
PCDHA13Q9Y5I0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHA13Q9Y5I0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHA13Q9Y5I0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHA13Q9Y5I0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDHA13Q9Y5I0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHA13Q9Y5I0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHA13Q9Y5I0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 AL031432.3-201ENST00000607698 485 ntBASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 AL354811.1-201ENST00000610286 706 ntBASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA13Q9Y5I0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA13Q9Y5I0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHA13Q9Y5I0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA13Q9Y5I0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA13Q9Y5I0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA13Q9Y5I0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA13Q9Y5I0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
PCDHA13Q9Y5I0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA13Q9Y5I0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.87■■□□□ 1.09
PCDHA13Q9Y5I0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHA13Q9Y5I0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA13Q9Y5I0 AC110285.6-201ENST00000617652 491 ntBASIC21.87■■□□□ 1.09
PCDHA13Q9Y5I0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA13Q9Y5I0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA13Q9Y5I0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHA13Q9Y5I0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA13Q9Y5I0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHA13Q9Y5I0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA13Q9Y5I0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA13Q9Y5I0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA13Q9Y5I0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms