Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 SMAP2-203ENST00000435168 666 ntTSL 55.88□□□□□ -1.472e-7■■■■□ 21.9
EXOSC5Q9NQT4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.69□□□□□ -0.064e-6■■■■□ 21.9
EXOSC5Q9NQT4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.62□□□□□ -0.394e-6■■■■□ 21.9
EXOSC5Q9NQT4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.6□□□□□ -0.394e-6■■■■□ 21.9
EXOSC5Q9NQT4 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC10.92□□□□□ -0.664e-6■■■■□ 21.9
EXOSC5Q9NQT4 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC10.83□□□□□ -0.684e-6■■■■□ 21.9
EXOSC5Q9NQT4 ASPH-201ENST00000356457 3730 ntTSL 1 (best) BASIC10.25□□□□□ -0.774e-6■■■■□ 21.9
EXOSC5Q9NQT4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.264e-7■■■■□ 21.9
EXOSC5Q9NQT4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.124e-7■■■■□ 21.9
EXOSC5Q9NQT4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.99□□□□□ -0.178e-7■■■■□ 21.9
EXOSC5Q9NQT4 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.86□□□□□ -0.518e-7■■■■□ 21.9
EXOSC5Q9NQT4 ERC1-221ENST00000588412 2071 ntTSL 210.16□□□□□ -0.782e-6■■■■□ 21.9
EXOSC5Q9NQT4 ERC1-208ENST00000538971 2267 ntTSL 27.03□□□□□ -1.282e-6■■■■□ 21.9
EXOSC5Q9NQT4 ERC1-215ENST00000543263 513 ntTSL 34.56□□□□□ -1.682e-6■■■■□ 21.9
EXOSC5Q9NQT4 HACE1-210ENST00000519645 859 ntTSL 518.69■□□□□ 0.581e-6■■■■□ 21.9
EXOSC5Q9NQT4 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.072e-6■■■■□ 21.9
EXOSC5Q9NQT4 PIBF1-207ENST00000615625 1098 ntTSL 1 (best) BASIC7.68□□□□□ -1.182e-6■■■■□ 21.9
EXOSC5Q9NQT4 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC6.95□□□□□ -1.32e-6■■■■□ 21.9
EXOSC5Q9NQT4 PIBF1-206ENST00000492803 395 ntTSL 33.34□□□□□ -1.872e-6■■■■□ 21.9
EXOSC5Q9NQT4 SREK1-211ENST00000522214 882 ntTSL 24.63□□□□□ -1.671e-6■■■■□ 21.9
EXOSC5Q9NQT4 SREK1-201ENST00000284041 3751 ntTSL 1 (best)3.83□□□□□ -1.81e-6■■■■□ 21.9
EXOSC5Q9NQT4 SREK1-206ENST00000519259 9353 ntTSL 23.19□□□□□ -1.91e-6■■■■□ 21.9
EXOSC5Q9NQT4 WDPCP-217ENST00000493315 1476 ntTSL 1 (best)6.7□□□□□ -1.342e-7■■■■□ 21.9
EXOSC5Q9NQT4 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.62□□□□□ -1.352e-7■■■■□ 21.9
EXOSC5Q9NQT4 MNAT1-201ENST00000261245 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.71e-6■■■■□ 21.8
EXOSC5Q9NQT4 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC9.43□□□□□ -0.91e-6■■■■□ 21.8
EXOSC5Q9NQT4 MNAT1-209ENST00000557134 680 ntTSL 33.52□□□□□ -1.851e-6■■■■□ 21.8
EXOSC5Q9NQT4 MNAT1-204ENST00000554002 616 ntTSL 32.29□□□□□ -2.041e-6■■■■□ 21.8
EXOSC5Q9NQT4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.73■□□□□ 0.434e-7■■■■□ 21.8
EXOSC5Q9NQT4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.51■□□□□ 0.073e-7■■■■□ 21.8
EXOSC5Q9NQT4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.133e-7■■■■□ 21.8
EXOSC5Q9NQT4 CNST-204ENST00000483271 2767 ntTSL 213.99□□□□□ -0.173e-7■■■■□ 21.8
EXOSC5Q9NQT4 LINC01194-201ENST00000505196 540 ntTSL 1 (best)9.43□□□□□ -0.91e-6■■■■□ 21.8
EXOSC5Q9NQT4 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC9.43□□□□□ -0.91e-6■■■■□ 21.8
EXOSC5Q9NQT4 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC6.5□□□□□ -1.371e-6■■■■□ 21.8
EXOSC5Q9NQT4 PRRC2C-208ENST00000476522 1931 ntTSL 510.74□□□□□ -0.692e-7■■■■□ 21.8
EXOSC5Q9NQT4 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC8.41□□□□□ -1.062e-7■■■■□ 21.8
EXOSC5Q9NQT4 PRRC2C-206ENST00000467601 717 ntTSL 27.79□□□□□ -1.162e-7■■■■□ 21.8
EXOSC5Q9NQT4 SSBP2-210ENST00000508912 256 ntTSL 25.18□□□□□ -1.582e-6■■■■□ 21.8
EXOSC5Q9NQT4 SSBP2-206ENST00000506960 685 ntTSL 23.35□□□□□ -1.872e-6■■■■□ 21.8
EXOSC5Q9NQT4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.23■□□□□ 0.674e-8■■■■□ 21.8
EXOSC5Q9NQT4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.584e-8■■■■□ 21.8
EXOSC5Q9NQT4 SMURF1-203ENST00000472627 825 ntTSL 211.84□□□□□ -0.514e-8■■■■□ 21.8
EXOSC5Q9NQT4 AKAP9-207ENST00000438114 696 ntTSL 25.42□□□□□ -1.547e-7■■■■□ 21.7
EXOSC5Q9NQT4 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.395e-7■■■■□ 21.7
EXOSC5Q9NQT4 ZNF680-205ENST00000476563 769 ntTSL 33.54□□□□□ -1.845e-7■■■■□ 21.7
EXOSC5Q9NQT4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.41□□□□□ -2.025e-7■■■■□ 21.7
EXOSC5Q9NQT4 GLMN-202ENST00000463560 734 ntTSL 52.63□□□□□ -1.997e-7■■■■□ 21.7
EXOSC5Q9NQT4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 02e-6■■■■□ 21.7
EXOSC5Q9NQT4 VRK1-204ENST00000555351 667 ntTSL 29.27□□□□□ -0.932e-6■■■■□ 21.7
EXOSC5Q9NQT4 DYRK1A-208ENST00000498351 224 ntTSL 1 (best)0.77□□□□□ -2.295e-7■■■■□ 21.6
EXOSC5Q9NQT4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.236e-7■■■■□ 21.6
EXOSC5Q9NQT4 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.446e-7■■■■□ 21.6
EXOSC5Q9NQT4 CEP70-204ENST00000462419 1021 ntTSL 512.04□□□□□ -0.486e-7■■■■□ 21.6
EXOSC5Q9NQT4 CEP70-208ENST00000474781 2028 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.726e-7■■■■□ 21.6
EXOSC5Q9NQT4 CEP70-210ENST00000481834 2037 ntTSL 1 (best) BASIC8.51□□□□□ -1.056e-7■■■■□ 21.6
EXOSC5Q9NQT4 CEP70-209ENST00000478673 974 ntTSL 27.24□□□□□ -1.256e-7■■■■□ 21.6
EXOSC5Q9NQT4 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.81□□□□□ -1.646e-7■■■■□ 21.6
EXOSC5Q9NQT4 CEP70-206ENST00000468900 1016 ntTSL 54.5□□□□□ -1.696e-7■■■■□ 21.6
EXOSC5Q9NQT4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.016e-7■■■■□ 21.6
EXOSC5Q9NQT4 SCAI-205ENST00000477186 1808 ntTSL 215.79■□□□□ 0.121e-6■■■■□ 21.5
EXOSC5Q9NQT4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.94□□□□□ -0.181e-6■■■■□ 21.5
EXOSC5Q9NQT4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.791e-6■■■■□ 21.5
EXOSC5Q9NQT4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC11.97□□□□□ -0.495e-8■■■■□ 21.5
EXOSC5Q9NQT4 TTL-201ENST00000233336 14269 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.92e-6■■■■□ 21.5
EXOSC5Q9NQT4 TTL-202ENST00000460450 4148 ntTSL 27.67□□□□□ -1.182e-6■■■■□ 21.5
EXOSC5Q9NQT4 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.616e-7■■■■□ 21.5
EXOSC5Q9NQT4 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.15e-7■■■■□ 21.5
EXOSC5Q9NQT4 SPTLC1-206ENST00000482632 837 ntTSL 57.97□□□□□ -1.136e-7■■■■□ 21.5
EXOSC5Q9NQT4 RTTN-216ENST00000640376 3307 ntTSL 57.83□□□□□ -1.165e-7■■■■□ 21.5
EXOSC5Q9NQT4 RTTN-211ENST00000638251 4801 ntTSL 55.91□□□□□ -1.465e-7■■■■□ 21.5
EXOSC5Q9NQT4 RTTN-209ENST00000583043 6278 ntTSL 1 (best)5.18□□□□□ -1.585e-7■■■■□ 21.5
EXOSC5Q9NQT4 RTTN-206ENST00000581161 6722 ntTSL 1 (best)3.99□□□□□ -1.775e-7■■■■□ 21.5
EXOSC5Q9NQT4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.35□□□□□ -1.875e-7■■■■□ 21.5
EXOSC5Q9NQT4 RBPJ-208ENST00000504907 1682 ntTSL 5 BASIC8.69□□□□□ -1.022e-6■■■■□ 21.5
EXOSC5Q9NQT4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.492e-6■■■■□ 21.5
EXOSC5Q9NQT4 PCCB-203ENST00000462542 488 ntTSL 39.75□□□□□ -0.851e-6■■■■□ 21.5
EXOSC5Q9NQT4 PCCB-205ENST00000465176 570 ntTSL 58.36□□□□□ -1.071e-6■■■■□ 21.5
EXOSC5Q9NQT4 PCCB-202ENST00000459873 534 ntTSL 47.48□□□□□ -1.211e-6■■■■□ 21.5
EXOSC5Q9NQT4 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.961e-6■■■■□ 21.5
EXOSC5Q9NQT4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.651e-6■■■■□ 21.5
EXOSC5Q9NQT4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.125e-7■■■■□ 21.5
EXOSC5Q9NQT4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.521e-6■■■■□ 21.4
EXOSC5Q9NQT4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.151e-6■■■■□ 21.4
EXOSC5Q9NQT4 CCDC91-209ENST00000539904 989 ntTSL 54.54□□□□□ -1.683e-6■■■■□ 21.4
EXOSC5Q9NQT4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.313e-6■■■■□ 21.4
EXOSC5Q9NQT4 CPQ-202ENST00000517742 660 ntTSL 56□□□□□ -1.453e-6■■■■□ 21.4
EXOSC5Q9NQT4 CPQ-204ENST00000519900 566 ntTSL 45.69□□□□□ -1.53e-6■■■■□ 21.4
EXOSC5Q9NQT4 NUP35-209ENST00000479162 2828 ntTSL 29.9□□□□□ -0.829e-7■■■■□ 21.4
EXOSC5Q9NQT4 NUP35-202ENST00000374930 998 ntTSL 26.77□□□□□ -1.339e-7■■■■□ 21.4
EXOSC5Q9NQT4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.729e-7■■■■□ 21.4
EXOSC5Q9NQT4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.14□□□□□ -1.759e-7■■■■□ 21.4
EXOSC5Q9NQT4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.731e-7■■■■□ 21.4
EXOSC5Q9NQT4 RNASET2-204ENST00000421787 1924 ntTSL 217.68■□□□□ 0.421e-7■■■■□ 21.4
EXOSC5Q9NQT4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.46■□□□□ 0.231e-7■■■■□ 21.4
EXOSC5Q9NQT4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.32■□□□□ 0.041e-7■■■■□ 21.4
EXOSC5Q9NQT4 RNASET2-201ENST00000028008 1220 ntTSL 514.97□□□□□ -0.011e-7■■■■□ 21.4
EXOSC5Q9NQT4 RNASET2-207ENST00000478180 963 ntTSL 514.63□□□□□ -0.071e-7■■■■□ 21.4
EXOSC5Q9NQT4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.21e-7■■■■□ 21.4
EXOSC5Q9NQT4 RNASET2-212ENST00000510083 2280 ntTSL 213.72□□□□□ -0.211e-7■■■■□ 21.4
Retrieved 100 of 8,799 protein–RNA pairs in 376.5 ms