RNA–Protein interactions for RNA: ENST00000508912.1

SSBP2-210, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 256 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-210ENST00000508912 DNAJC5BQ9UF47 199 aa14.04□□□□□ -0.16
SSBP2-210ENST00000508912 NISCHQ9Y2I1 1504 aa14□□□□□ -0.17
SSBP2-210ENST00000508912 ABCC9O60706 1549 aa13.94□□□□□ -0.18
SSBP2-210ENST00000508912 DNAJC5Q9H3Z4 198 aa13.68□□□□□ -0.22
SSBP2-210ENST00000508912 AEBP2Q6ZN18 517 aaPredicted RBP13.64□□□□□ -0.23
SSBP2-210ENST00000508912 CHIC1Q5VXU3 224 aa13.59□□□□□ -0.23
SSBP2-210ENST00000508912 CCDC180Q9P1Z9 1646 aa12.95□□□□□ -0.34
SSBP2-210ENST00000508912 PABPN1Q86U42 306 aaKnown RBP eCLIP12.85□□□□□ -0.35
SSBP2-210ENST00000508912 RB1CC1Q8TDY2 1594 aa12.85□□□□□ -0.35
SSBP2-210ENST00000508912 CECR2Q9BXF3 1484 aa12.7□□□□□ -0.38
SSBP2-210ENST00000508912 TRIM41Q8WV44 630 aa12.57□□□□□ -0.4
SSBP2-210ENST00000508912 NACADO15069 1562 aa12.54□□□□□ -0.4
SSBP2-210ENST00000508912 CC2D2AQ9P2K1 1620 aa12.53□□□□□ -0.4
SSBP2-210ENST00000508912 BICRAQ9NZM4 1560 aa12.5□□□□□ -0.41
SSBP2-210ENST00000508912 CUX2O14529 1486 aa12.49□□□□□ -0.41
SSBP2-210ENST00000508912 UNC13AQ9UPW8 1703 aa12.42□□□□□ -0.42
SSBP2-210ENST00000508912 SHROOM4Q9ULL8 1493 aa12.31□□□□□ -0.44
SSBP2-210ENST00000508912 EIF4G1Q04637 1599 aaKnown RBP12.28□□□□□ -0.44
SSBP2-210ENST00000508912 DCAF8L2P0C7V8 631 aa12.24□□□□□ -0.45
SSBP2-210ENST00000508912 ERCC6Q03468 1493 aa12.12□□□□□ -0.47
SSBP2-210ENST00000508912 MYO15BQ96JP2 1530 aa12.09□□□□□ -0.47
SSBP2-210ENST00000508912 PHF23Q9BUL5 403 aaPredicted RBP12.02□□□□□ -0.49
SSBP2-210ENST00000508912 ILDR1Q86SU0 546 aaPredicted RBP11.84□□□□□ -0.51
SSBP2-210ENST00000508912 OSCARQ8IYS5 282 aa11.79□□□□□ -0.52
SSBP2-210ENST00000508912 SCRIBQ14160 1630 aa11.78□□□□□ -0.52
SSBP2-210ENST00000508912 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
SSBP2-210ENST00000508912 TRHP20396 242 aaPredicted RBP11.73□□□□□ -0.53
SSBP2-210ENST00000508912 NESP48681 1621 aa11.68□□□□□ -0.54
SSBP2-210ENST00000508912 NCAPD3P42695 1498 aa11.63□□□□□ -0.55
SSBP2-210ENST00000508912 BAZ1AQ9NRL2 1556 aaPredicted RBP11.63□□□□□ -0.55
SSBP2-210ENST00000508912 RIMBP3CA6NJZ7 1639 aa11.63□□□□□ -0.55
SSBP2-210ENST00000508912 RIMBP3BA6NNM3 1639 aa11.63□□□□□ -0.55
SSBP2-210ENST00000508912 RIMBP3Q9UFD9 1639 aa11.63□□□□□ -0.55
SSBP2-210ENST00000508912 CYB5RLQ6IPT4 315 aa11.55□□□□□ -0.56
SSBP2-210ENST00000508912 DCAF1Q9Y4B6 1507 aa11.55□□□□□ -0.56
SSBP2-210ENST00000508912 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
SSBP2-210ENST00000508912 ARHGEF11O15085 1522 aa11.53□□□□□ -0.56
SSBP2-210ENST00000508912 PDS5BQ9NTI5 1447 aa11.49□□□□□ -0.57
SSBP2-210ENST00000508912 SENP3Q9H4L4 574 aaPredicted RBP11.48□□□□□ -0.57
SSBP2-210ENST00000508912 LAMC3Q9Y6N6 1575 aa11.47□□□□□ -0.57
SSBP2-210ENST00000508912 KIF21AQ7Z4S6 1674 aa11.43□□□□□ -0.58
SSBP2-210ENST00000508912 ATAD2BQ9ULI0 1458 aa11.42□□□□□ -0.58
SSBP2-210ENST00000508912 HMGXB3Q12766 1538 aa11.4□□□□□ -0.58
SSBP2-210ENST00000508912 MRC2Q9UBG0 1479 aa11.4□□□□□ -0.58
SSBP2-210ENST00000508912 WDR62O43379 1518 aa11.4□□□□□ -0.59
SSBP2-210ENST00000508912 ZCCHC6Q5VYS8 1495 aaKnown RBP11.37□□□□□ -0.59
SSBP2-210ENST00000508912 ARAP1Q96P48 1450 aa11.34□□□□□ -0.59
SSBP2-210ENST00000508912 BAZ1BQ9UIG0 1483 aaKnown RBP11.22□□□□□ -0.61
SSBP2-210ENST00000508912 CADPSQ9ULU8 1353 aa11.22□□□□□ -0.61
SSBP2-210ENST00000508912 RSF1Q96T23 1441 aaPredicted RBP11.2□□□□□ -0.62
SSBP2-210ENST00000508912 FBXO41Q8TF61 875 aa11.19□□□□□ -0.62
SSBP2-210ENST00000508912 KDM4FA0A1W2PPD8 638 aa11.17□□□□□ -0.62
SSBP2-210ENST00000508912 SOCS7O14512 581 aa11.17□□□□□ -0.62
SSBP2-210ENST00000508912 PLPPR3Q6T4P5 718 aa11.17□□□□□ -0.62
SSBP2-210ENST00000508912 LMTK3Q96Q04 1460 aa11.15□□□□□ -0.62
SSBP2-210ENST00000508912 CEP164Q9UPV0 1460 aa11.14□□□□□ -0.63
SSBP2-210ENST00000508912 SMARCA4P51532 1647 aa11.09□□□□□ -0.63
SSBP2-210ENST00000508912 ERCC6L2Q5T890 1561 aa11.07□□□□□ -0.64
SSBP2-210ENST00000508912 FANCD2Q9BXW9 1451 aa11.05□□□□□ -0.64
SSBP2-210ENST00000508912 PEG3Q9GZU2 1588 aa11.04□□□□□ -0.64
SSBP2-210ENST00000508912 ZNF608Q9ULD9 1512 aaPredicted RBP11.04□□□□□ -0.64
SSBP2-210ENST00000508912 URB2Q14146 1524 aaKnown RBP11.01□□□□□ -0.65
SSBP2-210ENST00000508912 ILDR2Q71H61 639 aa11.01□□□□□ -0.65
SSBP2-210ENST00000508912 IFT140Q96RY7 1462 aa10.99□□□□□ -0.65
SSBP2-210ENST00000508912 FBLN2P98095 1184 aa10.96□□□□□ -0.65
SSBP2-210ENST00000508912 CHD1O14646 1710 aa10.94□□□□□ -0.66
SSBP2-210ENST00000508912 HECW2Q9P2P5 1572 aa10.94□□□□□ -0.66
SSBP2-210ENST00000508912 EIF4G3O43432 1585 aaKnown RBP10.88□□□□□ -0.67
SSBP2-210ENST00000508912 CLASP1Q7Z460 1538 aa10.88□□□□□ -0.67
SSBP2-210ENST00000508912 CFTRP13569 1480 aa10.87□□□□□ -0.67
SSBP2-210ENST00000508912 GAPVD1Q14C86 1478 aa10.87□□□□□ -0.67
SSBP2-210ENST00000508912 DISP3Q9P2K9 1392 aa10.87□□□□□ -0.67
SSBP2-210ENST00000508912 SYNJ2O15056 1496 aa10.86□□□□□ -0.67
SSBP2-210ENST00000508912 AQRO60306 1485 aaKnown RBP eCLIP10.83□□□□□ -0.68
SSBP2-210ENST00000508912 KIF13AQ9H1H9 1805 aa10.79□□□□□ -0.68
SSBP2-210ENST00000508912 ADGRL1O94910 1474 aa10.78□□□□□ -0.68
SSBP2-210ENST00000508912 SYNJ1O43426 1573 aa10.77□□□□□ -0.68
SSBP2-210ENST00000508912 MROH2BQ7Z745 1585 aa10.77□□□□□ -0.68
SSBP2-210ENST00000508912 FAM69CQ0P6D2 419 aa10.75□□□□□ -0.69
SSBP2-210ENST00000508912 CHMP7Q8WUX9 453 aaPredicted RBP10.75□□□□□ -0.69
SSBP2-210ENST00000508912 KDM6BO15054 1643 aa10.75□□□□□ -0.69
SSBP2-210ENST00000508912 TOPBP1Q92547 1522 aa10.72□□□□□ -0.69
SSBP2-210ENST00000508912 ABCC10Q5T3U5 1492 aa10.71□□□□□ -0.69
SSBP2-210ENST00000508912 TARBP1Q13395 1621 aaKnown RBP10.69□□□□□ -0.7
SSBP2-210ENST00000508912 ABCC8Q09428 1581 aa10.69□□□□□ -0.7
SSBP2-210ENST00000508912 FOXD1Q16676 465 aa10.66□□□□□ -0.7
SSBP2-210ENST00000508912 SNAPC4Q5SXM2 1469 aa10.66□□□□□ -0.7
SSBP2-210ENST00000508912 MAGI1Q96QZ7 1491 aaPredicted RBP10.62□□□□□ -0.71
SSBP2-210ENST00000508912 TDRD9Q8NDG6 1382 aaKnown RBP10.61□□□□□ -0.71
SSBP2-210ENST00000508912 SPATA31D1Q6ZQQ2 1576 aa10.6□□□□□ -0.71
SSBP2-210ENST00000508912 DIP2BQ9P265 1576 aa10.59□□□□□ -0.71
SSBP2-210ENST00000508912 DNMBPQ6XZF7 1577 aa10.57□□□□□ -0.72
SSBP2-210ENST00000508912 CERKQ8TCT0 537 aa10.57□□□□□ -0.72
SSBP2-210ENST00000508912 MAPKBP1O60336 1514 aa10.57□□□□□ -0.72
SSBP2-210ENST00000508912 NPM1P06748 294 aaKnown RBP eCLIP10.56□□□□□ -0.72
SSBP2-210ENST00000508912 ADRA2BP18089 450 aa10.55□□□□□ -0.72
SSBP2-210ENST00000508912 POLA1P09884 1462 aaPredicted RBP10.55□□□□□ -0.72
SSBP2-210ENST00000508912 WDR97A6NE52 1622 aa10.54□□□□□ -0.72
SSBP2-210ENST00000508912 GRIN2BQ13224 1484 aa10.53□□□□□ -0.72
SSBP2-210ENST00000508912 WIZO95785 1651 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms