RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
SSBP2-206ENST00000506960 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
SSBP2-206ENST00000506960 SENP3Q9H4L4 574 aaPredicted RBP24.51■■□□□ 1.51
SSBP2-206ENST00000506960 PHF23Q9BUL5 403 aaPredicted RBP23.96■■□□□ 1.43
SSBP2-206ENST00000506960 FOXD1Q16676 465 aa22.77■■□□□ 1.24
SSBP2-206ENST00000506960 POTEDQ86YR6 584 aa22.51■■□□□ 1.19
SSBP2-206ENST00000506960 MSH5O43196 834 aa21.83■■□□□ 1.09
SSBP2-206ENST00000506960 PIAS4Q8N2W9 510 aaPredicted RBP21.16■□□□□ 0.98
SSBP2-206ENST00000506960 PLPPR3Q6T4P5 718 aa20.67■□□□□ 0.9
SSBP2-206ENST00000506960 PPP6R1Q9UPN7 881 aa20.59■□□□□ 0.89
SSBP2-206ENST00000506960 ADRA2BP18089 450 aa20.51■□□□□ 0.87
SSBP2-206ENST00000506960 DMRT2Q9Y5R5 561 aa19.25■□□□□ 0.67
SSBP2-206ENST00000506960 CACNB1Q02641 598 aaPredicted RBP19.16■□□□□ 0.66
SSBP2-206ENST00000506960 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
SSBP2-206ENST00000506960 MAPK8IP2Q13387 824 aaPredicted RBP19.04■□□□□ 0.64
SSBP2-206ENST00000506960 DCAF8L1A6NGE4 600 aa18.49■□□□□ 0.55
SSBP2-206ENST00000506960 RNF39Q9H2S5 420 aa18.44■□□□□ 0.54
SSBP2-206ENST00000506960 C1QBPQ07021 282 aaKnown RBP18.23■□□□□ 0.51
SSBP2-206ENST00000506960 HOXD11P31277 338 aaPredicted RBP18.22■□□□□ 0.51
SSBP2-206ENST00000506960 PPP4R3CPQ6ZMV5 832 aa17.93■□□□□ 0.46
SSBP2-206ENST00000506960 RNF216Q9NWF9 866 aaPredicted RBP17.91■□□□□ 0.46
SSBP2-206ENST00000506960 DNAJC5BQ9UF47 199 aa17.9■□□□□ 0.46
SSBP2-206ENST00000506960 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
SSBP2-206ENST00000506960 POTEHQ6S545 545 aa17.54■□□□□ 0.4
SSBP2-206ENST00000506960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.4■□□□□ 0.38
SSBP2-206ENST00000506960 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
SSBP2-206ENST00000506960 DSG3P32926 999 aa16.97■□□□□ 0.31
SSBP2-206ENST00000506960 CAPN15O75808 1086 aa16.92■□□□□ 0.3
SSBP2-206ENST00000506960 U3KPZ7 1027 aaPredicted RBP16.83■□□□□ 0.28
SSBP2-206ENST00000506960 SPINK5Q9NQ38 1064 aaPredicted RBP16.79■□□□□ 0.28
SSBP2-206ENST00000506960 NPM3O75607 178 aaKnown RBP16.71■□□□□ 0.27
SSBP2-206ENST00000506960 APLP2Q06481 763 aa16.59■□□□□ 0.25
SSBP2-206ENST00000506960 ZNF219Q9P2Y4 722 aaPredicted RBP16.48■□□□□ 0.23
SSBP2-206ENST00000506960 TRHP20396 242 aaPredicted RBP16.43■□□□□ 0.22
SSBP2-206ENST00000506960 RBM42Q9BTD8 480 aaKnown RBP16.4■□□□□ 0.22
SSBP2-206ENST00000506960 ABCB7O75027 752 aa16.35■□□□□ 0.21
SSBP2-206ENST00000506960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.33■□□□□ 0.2
SSBP2-206ENST00000506960 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.2
SSBP2-206ENST00000506960 CHRDL2Q6WN34 429 aa16.23■□□□□ 0.19
SSBP2-206ENST00000506960 SAMD1Q6SPF0 538 aaPredicted RBP16.13■□□□□ 0.17
SSBP2-206ENST00000506960 SLC4A2P04920 1241 aa16.12■□□□□ 0.17
SSBP2-206ENST00000506960 SP7Q8TDD2 431 aaPredicted RBP16.08■□□□□ 0.16
SSBP2-206ENST00000506960 POLA2Q14181 598 aa15.81■□□□□ 0.12
SSBP2-206ENST00000506960 AKT1S1Q96B36 256 aa15.78■□□□□ 0.12
SSBP2-206ENST00000506960 HAX1O00165 279 aa15.63■□□□□ 0.09
SSBP2-206ENST00000506960 PIP4P2Q8N4L2 257 aa15.62■□□□□ 0.09
SSBP2-206ENST00000506960 KCNA4P22459 653 aa15.61■□□□□ 0.09
SSBP2-206ENST00000506960 ZBTB12Q9Y330 459 aaPredicted RBP15.6■□□□□ 0.09
SSBP2-206ENST00000506960 MYCNP04198 464 aaPredicted RBP15.58■□□□□ 0.08
SSBP2-206ENST00000506960 REM2Q8IYK8 340 aaPredicted RBP15.55■□□□□ 0.08
SSBP2-206ENST00000506960 FXR2P51116 673 aaKnown RBP eCLIP15.43■□□□□ 0.06
SSBP2-206ENST00000506960 PITPNM1O00562 1244 aa15.36■□□□□ 0.05
SSBP2-206ENST00000506960 OSCARQ8IYS5 282 aa15.28■□□□□ 0.04
SSBP2-206ENST00000506960 EVX2Q03828 476 aa15.18■□□□□ 0.02
SSBP2-206ENST00000506960 LHX8Q68G74 356 aa15.07■□□□□ 0
SSBP2-206ENST00000506960 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
SSBP2-206ENST00000506960 PRKAR2AP13861 404 aaKnown RBP14.99□□□□□ -0.01
SSBP2-206ENST00000506960 C19orf67A6NJJ6 358 aa14.97□□□□□ -0.01
SSBP2-206ENST00000506960 SPDYE2BA6NHP3 402 aa14.96□□□□□ -0.01
SSBP2-206ENST00000506960 SPDYE6P0CI01 402 aa14.96□□□□□ -0.01
SSBP2-206ENST00000506960 SPDYE2Q495Y8 402 aa14.96□□□□□ -0.01
SSBP2-206ENST00000506960 FOXD4L1Q9NU39 408 aa14.95□□□□□ -0.02
SSBP2-206ENST00000506960 GABBR2O75899 941 aa14.93□□□□□ -0.02
SSBP2-206ENST00000506960 SPDYE1Q8NFV5 336 aaPredicted RBP14.92□□□□□ -0.02
SSBP2-206ENST00000506960 CLEC11AQ9Y240 323 aa14.85□□□□□ -0.03
SSBP2-206ENST00000506960 FBLN2P98095 1184 aa14.82□□□□□ -0.04
SSBP2-206ENST00000506960 PLSCR2Q9NRY7 297 aa14.76□□□□□ -0.05
SSBP2-206ENST00000506960 CLCN6P51797 869 aa14.68□□□□□ -0.06
SSBP2-206ENST00000506960 SLC4A1APQ9BWU0 796 aaKnown RBP14.67□□□□□ -0.06
SSBP2-206ENST00000506960 ATXN8OSP0DMR3 200 aa14.66□□□□□ -0.06
SSBP2-206ENST00000506960 ZNF692Q9BU19 519 aaPredicted RBP14.62□□□□□ -0.07
SSBP2-206ENST00000506960 SSUH2Q9Y2M2 353 aa14.59□□□□□ -0.07
SSBP2-206ENST00000506960 PRR29P0C7W0 189 aa14.55□□□□□ -0.08
SSBP2-206ENST00000506960 CHADLQ6NUI6 762 aa14.55□□□□□ -0.08
SSBP2-206ENST00000506960 POTEIP0CG38 1075 aa14.5□□□□□ -0.09
SSBP2-206ENST00000506960 CD44P16070 742 aaKnown RBP14.48□□□□□ -0.09
SSBP2-206ENST00000506960 DCBLD2Q96PD2 775 aa14.46□□□□□ -0.09
SSBP2-206ENST00000506960 MKRN4PQ13434 485 aaPredicted RBP14.37□□□□□ -0.11
SSBP2-206ENST00000506960 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
SSBP2-206ENST00000506960 PABPN1Q86U42 306 aaKnown RBP eCLIP14.33□□□□□ -0.12
SSBP2-206ENST00000506960 ZBTB22O15209 634 aa14.25□□□□□ -0.13
SSBP2-206ENST00000506960 ZNF579Q8NAF0 562 aaKnown RBP14.23□□□□□ -0.13
SSBP2-206ENST00000506960 PCDH10Q9P2E7 1040 aa14.23□□□□□ -0.13
SSBP2-206ENST00000506960 POTEMA6NI47 508 aa14.21□□□□□ -0.13
SSBP2-206ENST00000506960 OTUD5Q96G74 571 aa14.18□□□□□ -0.14
SSBP2-206ENST00000506960 ZRANB1Q9UGI0 708 aa14.15□□□□□ -0.14
SSBP2-206ENST00000506960 POTEGQ6S5H5 508 aa14.14□□□□□ -0.15
SSBP2-206ENST00000506960 GALR2O43603 387 aaPredicted RBP14.02□□□□□ -0.17
SSBP2-206ENST00000506960 PAK3O75914 559 aaPredicted RBP14.01□□□□□ -0.17
SSBP2-206ENST00000506960 POTEB2H3BUK9 544 aa13.99□□□□□ -0.17
SSBP2-206ENST00000506960 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
SSBP2-206ENST00000506960 MAMSTRQ6ZN01 415 aa13.92□□□□□ -0.18
SSBP2-206ENST00000506960 CREBZFQ9NS37 354 aa13.88□□□□□ -0.19
SSBP2-206ENST00000506960 C7P10643 843 aa13.83□□□□□ -0.2
SSBP2-206ENST00000506960 SLC39A7Q92504 469 aa13.82□□□□□ -0.2
SSBP2-206ENST00000506960 METRNQ9UJH8 293 aa13.8□□□□□ -0.2
SSBP2-206ENST00000506960 NPM1P06748 294 aaKnown RBP eCLIP13.79□□□□□ -0.2
SSBP2-206ENST00000506960 PHF12Q96QT6 1004 aa13.79□□□□□ -0.2
SSBP2-206ENST00000506960 PELP1Q8IZL8 1130 aaKnown RBP13.78□□□□□ -0.2
SSBP2-206ENST00000506960 ASTLQ6HA08 431 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms