RNA–Protein interactions for RNA: ENST00000295119.8

NUP35-201, Transcript of nucleoporin 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP35, Length 1,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-201ENST00000295119 AEBP2Q6ZN18 517 aaPredicted RBP23.37■■□□□ 1.33
NUP35-201ENST00000295119 CHIC1Q5VXU3 224 aa21.76■■□□□ 1.07
NUP35-201ENST00000295119 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
NUP35-201ENST00000295119 POTEDQ86YR6 584 aa20.01■□□□□ 0.79
NUP35-201ENST00000295119 PHF23Q9BUL5 403 aaPredicted RBP19.67■□□□□ 0.74
NUP35-201ENST00000295119 FOXD1Q16676 465 aa18.92■□□□□ 0.62
NUP35-201ENST00000295119 MSH5O43196 834 aa18.19■□□□□ 0.5
NUP35-201ENST00000295119 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
NUP35-201ENST00000295119 PPP6R1Q9UPN7 881 aa16.7■□□□□ 0.26
NUP35-201ENST00000295119 ADRA2BP18089 450 aa16.52■□□□□ 0.24
NUP35-201ENST00000295119 CACNB1Q02641 598 aaPredicted RBP16.37■□□□□ 0.21
NUP35-201ENST00000295119 PLPPR3Q6T4P5 718 aa16.08■□□□□ 0.16
NUP35-201ENST00000295119 DMRT2Q9Y5R5 561 aa15.76■□□□□ 0.11
NUP35-201ENST00000295119 MAPK8IP2Q13387 824 aaPredicted RBP15.59■□□□□ 0.09
NUP35-201ENST00000295119 RNF39Q9H2S5 420 aa15.43■□□□□ 0.06
NUP35-201ENST00000295119 POTEHQ6S545 545 aa15.39■□□□□ 0.05
NUP35-201ENST00000295119 C1QBPQ07021 282 aaKnown RBP15.11■□□□□ 0.01
NUP35-201ENST00000295119 SCAF1Q9H7N4 1312 aaKnown RBP15.11■□□□□ 0.01
NUP35-201ENST00000295119 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
NUP35-201ENST00000295119 HOXD11P31277 338 aaPredicted RBP14.7□□□□□ -0.06
NUP35-201ENST00000295119 DNAJC5BQ9UF47 199 aa14.5□□□□□ -0.09
NUP35-201ENST00000295119 RNF216Q9NWF9 866 aaPredicted RBP14.2□□□□□ -0.14
NUP35-201ENST00000295119 DSG3P32926 999 aa13.99□□□□□ -0.17
NUP35-201ENST00000295119 CNKSR2Q8WXI2 1034 aa13.98□□□□□ -0.17
NUP35-201ENST00000295119 PPP4R3CPQ6ZMV5 832 aa13.93□□□□□ -0.18
NUP35-201ENST00000295119 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.19
NUP35-201ENST00000295119 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
NUP35-201ENST00000295119 SPINK5Q9NQ38 1064 aaPredicted RBP13.69□□□□□ -0.22
NUP35-201ENST00000295119 CAPN15O75808 1086 aa13.68□□□□□ -0.22
NUP35-201ENST00000295119 CHRDL2Q6WN34 429 aa13.57□□□□□ -0.24
NUP35-201ENST00000295119 U3KPZ7 1027 aaPredicted RBP13.51□□□□□ -0.25
NUP35-201ENST00000295119 RBM42Q9BTD8 480 aaKnown RBP13.34□□□□□ -0.27
NUP35-201ENST00000295119 ABCB7O75027 752 aa13.24□□□□□ -0.29
NUP35-201ENST00000295119 TRHP20396 242 aaPredicted RBP13.13□□□□□ -0.31
NUP35-201ENST00000295119 PLSCR2Q9NRY7 297 aa13.13□□□□□ -0.31
NUP35-201ENST00000295119 ZNF219Q9P2Y4 722 aaPredicted RBP13.1□□□□□ -0.31
NUP35-201ENST00000295119 HAX1O00165 279 aa13.06□□□□□ -0.32
NUP35-201ENST00000295119 PIP4P2Q8N4L2 257 aa13□□□□□ -0.33
NUP35-201ENST00000295119 NCBP3Q53F19 620 aaKnown RBP12.97□□□□□ -0.33
NUP35-201ENST00000295119 APLP2Q06481 763 aa12.95□□□□□ -0.34
NUP35-201ENST00000295119 LHX8Q68G74 356 aa12.94□□□□□ -0.34
NUP35-201ENST00000295119 EVX2Q03828 476 aa12.88□□□□□ -0.35
NUP35-201ENST00000295119 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
NUP35-201ENST00000295119 AKT1S1Q96B36 256 aa12.8□□□□□ -0.36
NUP35-201ENST00000295119 FXR2P51116 673 aaKnown RBP eCLIP12.74□□□□□ -0.37
NUP35-201ENST00000295119 REM2Q8IYK8 340 aaPredicted RBP12.67□□□□□ -0.38
NUP35-201ENST00000295119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.63□□□□□ -0.39
NUP35-201ENST00000295119 HNRNPUL2Q1KMD3 747 aaKnown RBP12.63□□□□□ -0.39
NUP35-201ENST00000295119 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
NUP35-201ENST00000295119 PITPNM1O00562 1244 aa12.54□□□□□ -0.4
NUP35-201ENST00000295119 POLA2Q14181 598 aa12.53□□□□□ -0.4
NUP35-201ENST00000295119 GABBR2O75899 941 aa12.51□□□□□ -0.41
NUP35-201ENST00000295119 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
NUP35-201ENST00000295119 C19orf67A6NJJ6 358 aa12.39□□□□□ -0.43
NUP35-201ENST00000295119 POTEIP0CG38 1075 aa12.26□□□□□ -0.45
NUP35-201ENST00000295119 POTEMA6NI47 508 aa12.22□□□□□ -0.45
NUP35-201ENST00000295119 PRKAR2AP13861 404 aaKnown RBP12.18□□□□□ -0.46
NUP35-201ENST00000295119 PCDH10Q9P2E7 1040 aa12.17□□□□□ -0.46
NUP35-201ENST00000295119 ZBTB12Q9Y330 459 aaPredicted RBP12.17□□□□□ -0.46
NUP35-201ENST00000295119 POTEGQ6S5H5 508 aa12.15□□□□□ -0.47
NUP35-201ENST00000295119 OSCARQ8IYS5 282 aa12.15□□□□□ -0.47
NUP35-201ENST00000295119 OTUD5Q96G74 571 aa12.03□□□□□ -0.48
NUP35-201ENST00000295119 CLCN6P51797 869 aa11.88□□□□□ -0.51
NUP35-201ENST00000295119 MYCNP04198 464 aaPredicted RBP11.86□□□□□ -0.51
NUP35-201ENST00000295119 POTEB2H3BUK9 544 aa11.81□□□□□ -0.52
NUP35-201ENST00000295119 DCBLD2Q96PD2 775 aa11.81□□□□□ -0.52
NUP35-201ENST00000295119 SPDYE1Q8NFV5 336 aaPredicted RBP11.8□□□□□ -0.52
NUP35-201ENST00000295119 CLEC11AQ9Y240 323 aa11.79□□□□□ -0.52
NUP35-201ENST00000295119 CHADLQ6NUI6 762 aa11.75□□□□□ -0.53
NUP35-201ENST00000295119 ATF5Q9Y2D1 282 aaPredicted RBP11.72□□□□□ -0.53
NUP35-201ENST00000295119 SPDYE2BA6NHP3 402 aa11.71□□□□□ -0.54
NUP35-201ENST00000295119 SPDYE6P0CI01 402 aa11.71□□□□□ -0.54
NUP35-201ENST00000295119 SPDYE2Q495Y8 402 aa11.71□□□□□ -0.54
NUP35-201ENST00000295119 CD44P16070 742 aaKnown RBP11.7□□□□□ -0.54
NUP35-201ENST00000295119 LCE2DQ5TA82 110 aaPredicted RBP11.68□□□□□ -0.54
NUP35-201ENST00000295119 ZNF579Q8NAF0 562 aaKnown RBP11.51□□□□□ -0.57
NUP35-201ENST00000295119 FAM163AQ96GL9 167 aaPredicted RBP11.49□□□□□ -0.57
NUP35-201ENST00000295119 FARP1Q9Y4F1 1045 aaPredicted RBP11.48□□□□□ -0.57
NUP35-201ENST00000295119 PRR29P0C7W0 189 aa11.45□□□□□ -0.58
NUP35-201ENST00000295119 POTEJP0CG39 1038 aa11.45□□□□□ -0.58
NUP35-201ENST00000295119 GALR2O43603 387 aaPredicted RBP11.43□□□□□ -0.58
NUP35-201ENST00000295119 SSUH2Q9Y2M2 353 aa11.43□□□□□ -0.58
NUP35-201ENST00000295119 CDAN1Q8IWY9 1227 aa11.42□□□□□ -0.58
NUP35-201ENST00000295119 MAMSTRQ6ZN01 415 aa11.38□□□□□ -0.59
NUP35-201ENST00000295119 PELP1Q8IZL8 1130 aaKnown RBP11.38□□□□□ -0.59
NUP35-201ENST00000295119 KCNA4P22459 653 aa11.37□□□□□ -0.59
NUP35-201ENST00000295119 ZRANB1Q9UGI0 708 aa11.34□□□□□ -0.59
NUP35-201ENST00000295119 ZNF692Q9BU19 519 aaPredicted RBP11.32□□□□□ -0.6
NUP35-201ENST00000295119 MMRN1Q13201 1228 aa11.3□□□□□ -0.6
NUP35-201ENST00000295119 FBLN2P98095 1184 aa11.29□□□□□ -0.6
NUP35-201ENST00000295119 METRNQ9UJH8 293 aa11.24□□□□□ -0.61
NUP35-201ENST00000295119 C7P10643 843 aa11.21□□□□□ -0.61
NUP35-201ENST00000295119 SPNS2Q8IVW8 549 aa11.2□□□□□ -0.62
NUP35-201ENST00000295119 SCUBE2Q9NQ36 999 aa11.19□□□□□ -0.62
NUP35-201ENST00000295119 SLC39A7Q92504 469 aa11.18□□□□□ -0.62
NUP35-201ENST00000295119 ASTLQ6HA08 431 aaPredicted RBP11.15□□□□□ -0.62
NUP35-201ENST00000295119 MKRN4PQ13434 485 aaPredicted RBP11.13□□□□□ -0.63
NUP35-201ENST00000295119 PABPN1Q86U42 306 aaKnown RBP eCLIP11.11□□□□□ -0.63
NUP35-201ENST00000295119 ATMINO43313 823 aaPredicted RBP11.08□□□□□ -0.64
NUP35-201ENST00000295119 PHF12Q96QT6 1004 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms