RNA–Protein interactions for RNA: ENST00000374930.7

NUP35-202, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-202ENST00000374930 AEBP2Q6ZN18 517 aaPredicted RBP21.48■■□□□ 1.03
NUP35-202ENST00000374930 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
NUP35-202ENST00000374930 PHF23Q9BUL5 403 aaPredicted RBP18.77■□□□□ 0.6
NUP35-202ENST00000374930 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
NUP35-202ENST00000374930 PLPPR3Q6T4P5 718 aa17.35■□□□□ 0.37
NUP35-202ENST00000374930 NISCHQ9Y2I1 1504 aa16.99■□□□□ 0.31
NUP35-202ENST00000374930 FOXD1Q16676 465 aa16.79■□□□□ 0.28
NUP35-202ENST00000374930 PPP6R1Q9UPN7 881 aa16.46■□□□□ 0.23
NUP35-202ENST00000374930 ADRA2BP18089 450 aa16.43■□□□□ 0.22
NUP35-202ENST00000374930 PIAS4Q8N2W9 510 aaPredicted RBP15.87■□□□□ 0.13
NUP35-202ENST00000374930 KCNA4P22459 653 aa15.4■□□□□ 0.06
NUP35-202ENST00000374930 PPP4R3CPQ6ZMV5 832 aa15.36■□□□□ 0.05
NUP35-202ENST00000374930 MSH5O43196 834 aa15.28■□□□□ 0.04
NUP35-202ENST00000374930 NCBP3Q53F19 620 aaKnown RBP14.98□□□□□ -0.01
NUP35-202ENST00000374930 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
NUP35-202ENST00000374930 NPM3O75607 178 aaKnown RBP14.85□□□□□ -0.03
NUP35-202ENST00000374930 MAPK8IP2Q13387 824 aaPredicted RBP14.83□□□□□ -0.04
NUP35-202ENST00000374930 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
NUP35-202ENST00000374930 CCDC180Q9P1Z9 1646 aa14.81□□□□□ -0.04
NUP35-202ENST00000374930 SLC4A1APQ9BWU0 796 aaKnown RBP14.68□□□□□ -0.06
NUP35-202ENST00000374930 EHMT2Q96KQ7 1210 aa14.66□□□□□ -0.06
NUP35-202ENST00000374930 DMRT2Q9Y5R5 561 aa14.51□□□□□ -0.09
NUP35-202ENST00000374930 RNF216Q9NWF9 866 aaPredicted RBP14.46□□□□□ -0.09
NUP35-202ENST00000374930 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
NUP35-202ENST00000374930 DNAJC5BQ9UF47 199 aa14.35□□□□□ -0.11
NUP35-202ENST00000374930 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
NUP35-202ENST00000374930 ZCCHC6Q5VYS8 1495 aaKnown RBP14.27□□□□□ -0.12
NUP35-202ENST00000374930 ZBTB22O15209 634 aa14.23□□□□□ -0.13
NUP35-202ENST00000374930 DCAF1Q9Y4B6 1507 aa14.22□□□□□ -0.13
NUP35-202ENST00000374930 MYO15BQ96JP2 1530 aa14.06□□□□□ -0.16
NUP35-202ENST00000374930 FOXD4L1Q9NU39 408 aa14.04□□□□□ -0.16
NUP35-202ENST00000374930 SLC4A2P04920 1241 aa13.97□□□□□ -0.17
NUP35-202ENST00000374930 DCAF8L2P0C7V8 631 aa13.84□□□□□ -0.19
NUP35-202ENST00000374930 DCAF8L1A6NGE4 600 aa13.82□□□□□ -0.2
NUP35-202ENST00000374930 NACADO15069 1562 aa13.82□□□□□ -0.2
NUP35-202ENST00000374930 MYCNP04198 464 aaPredicted RBP13.66□□□□□ -0.22
NUP35-202ENST00000374930 ABCC9O60706 1549 aa13.65□□□□□ -0.22
NUP35-202ENST00000374930 SHROOM4Q9ULL8 1493 aa13.65□□□□□ -0.22
NUP35-202ENST00000374930 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.63□□□□□ -0.23
NUP35-202ENST00000374930 RB1CC1Q8TDY2 1594 aa13.61□□□□□ -0.23
NUP35-202ENST00000374930 ATXN8OSP0DMR3 200 aa13.5□□□□□ -0.25
NUP35-202ENST00000374930 U3KPZ7 1027 aaPredicted RBP13.5□□□□□ -0.25
NUP35-202ENST00000374930 POTEDQ86YR6 584 aa13.41□□□□□ -0.26
NUP35-202ENST00000374930 SCRIBQ14160 1630 aa13.39□□□□□ -0.27
NUP35-202ENST00000374930 ATF5Q9Y2D1 282 aaPredicted RBP13.37□□□□□ -0.27
NUP35-202ENST00000374930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.33□□□□□ -0.28
NUP35-202ENST00000374930 SUPT5HO00267 1087 aaKnown RBP13.33□□□□□ -0.28
NUP35-202ENST00000374930 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.28
NUP35-202ENST00000374930 SAMD1Q6SPF0 538 aaPredicted RBP13.33□□□□□ -0.28
NUP35-202ENST00000374930 RSF1Q96T23 1441 aaPredicted RBP13.19□□□□□ -0.3
NUP35-202ENST00000374930 RNF39Q9H2S5 420 aa13.18□□□□□ -0.3
NUP35-202ENST00000374930 BAZ1AQ9NRL2 1556 aaPredicted RBP13.15□□□□□ -0.3
NUP35-202ENST00000374930 UNC13AQ9UPW8 1703 aa13.13□□□□□ -0.31
NUP35-202ENST00000374930 APLP2Q06481 763 aa13.09□□□□□ -0.31
NUP35-202ENST00000374930 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
NUP35-202ENST00000374930 SPINK5Q9NQ38 1064 aaPredicted RBP13.04□□□□□ -0.32
NUP35-202ENST00000374930 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
NUP35-202ENST00000374930 CECR2Q9BXF3 1484 aa13.03□□□□□ -0.32
NUP35-202ENST00000374930 MROH2BQ7Z745 1585 aa13□□□□□ -0.33
NUP35-202ENST00000374930 C1QBPQ07021 282 aaKnown RBP13□□□□□ -0.33
NUP35-202ENST00000374930 SMARCA4P51532 1647 aa12.97□□□□□ -0.33
NUP35-202ENST00000374930 PEG3Q9GZU2 1588 aa12.94□□□□□ -0.34
NUP35-202ENST00000374930 TRHP20396 242 aaPredicted RBP12.94□□□□□ -0.34
NUP35-202ENST00000374930 FKBP8Q14318 412 aa12.93□□□□□ -0.34
NUP35-202ENST00000374930 CAPN15O75808 1086 aa12.9□□□□□ -0.34
NUP35-202ENST00000374930 PABPN1Q86U42 306 aaKnown RBP eCLIP12.88□□□□□ -0.35
NUP35-202ENST00000374930 TOP2AP11388 1531 aaKnown RBP12.88□□□□□ -0.35
NUP35-202ENST00000374930 WIZO95785 1651 aa12.86□□□□□ -0.35
NUP35-202ENST00000374930 SMARCA2P51531 1590 aa12.86□□□□□ -0.35
NUP35-202ENST00000374930 POLA2Q14181 598 aa12.82□□□□□ -0.36
NUP35-202ENST00000374930 MKRN4PQ13434 485 aaPredicted RBP12.79□□□□□ -0.36
NUP35-202ENST00000374930 ATAD2BQ9ULI0 1458 aa12.77□□□□□ -0.37
NUP35-202ENST00000374930 NCAPD3P42695 1498 aa12.74□□□□□ -0.37
NUP35-202ENST00000374930 ABCB7O75027 752 aa12.74□□□□□ -0.37
NUP35-202ENST00000374930 CCDC88BA6NC98 1476 aa12.71□□□□□ -0.38
NUP35-202ENST00000374930 BAZ1BQ9UIG0 1483 aaKnown RBP12.71□□□□□ -0.38
NUP35-202ENST00000374930 HMGXB3Q12766 1538 aa12.7□□□□□ -0.38
NUP35-202ENST00000374930 TRIM41Q8WV44 630 aa12.69□□□□□ -0.38
NUP35-202ENST00000374930 EIF4G1Q04637 1599 aaKnown RBP12.69□□□□□ -0.38
NUP35-202ENST00000374930 FBLN2P98095 1184 aa12.66□□□□□ -0.38
NUP35-202ENST00000374930 DSG3P32926 999 aa12.65□□□□□ -0.38
NUP35-202ENST00000374930 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
NUP35-202ENST00000374930 CACNB1Q02641 598 aaPredicted RBP12.56□□□□□ -0.4
NUP35-202ENST00000374930 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
NUP35-202ENST00000374930 EEA1Q15075 1411 aa12.53□□□□□ -0.4
NUP35-202ENST00000374930 PROM2Q8N271 834 aa12.48□□□□□ -0.41
NUP35-202ENST00000374930 CFTRP13569 1480 aa12.45□□□□□ -0.42
NUP35-202ENST00000374930 WRNQ14191 1432 aaPredicted RBP eCLIP12.45□□□□□ -0.42
NUP35-202ENST00000374930 CC2D2AQ9P2K1 1620 aa12.43□□□□□ -0.42
NUP35-202ENST00000374930 CADPSQ9ULU8 1353 aa12.39□□□□□ -0.43
NUP35-202ENST00000374930 OSCARQ8IYS5 282 aa12.38□□□□□ -0.43
NUP35-202ENST00000374930 RTN4Q9NQC3 1192 aaKnown RBP12.38□□□□□ -0.43
NUP35-202ENST00000374930 PRDM2Q13029 1718 aa12.36□□□□□ -0.43
NUP35-202ENST00000374930 ABCC8Q09428 1581 aa12.33□□□□□ -0.44
NUP35-202ENST00000374930 TOP2BQ02880 1626 aa12.33□□□□□ -0.44
NUP35-202ENST00000374930 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
NUP35-202ENST00000374930 FBXO3Q9UK99 471 aa12.32□□□□□ -0.44
NUP35-202ENST00000374930 LOC105371045A0A1W2PR82 267 aa12.3□□□□□ -0.44
NUP35-202ENST00000374930 SPDYE2BA6NHP3 402 aa12.29□□□□□ -0.44
NUP35-202ENST00000374930 SPDYE6P0CI01 402 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms