RNA–Protein interactions for RNA: ENST00000360876.8

EIF3B-201, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3B, Length 3,055 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-201ENST00000360876 NISCHQ9Y2I1 1504 aa35.6■■■■□ 3.29
EIF3B-201ENST00000360876 SHROOM4Q9ULL8 1493 aa32.01■■■□□ 2.71
EIF3B-201ENST00000360876 SUPT5HO00267 1087 aaKnown RBP31.52■■■□□ 2.64
EIF3B-201ENST00000360876 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
EIF3B-201ENST00000360876 MYO15BQ96JP2 1530 aa30.29■■■□□ 2.44
EIF3B-201ENST00000360876 CHIC1Q5VXU3 224 aa30.24■■■□□ 2.43
EIF3B-201ENST00000360876 PCGF6Q9BYE7 350 aa30.17■■■□□ 2.42
EIF3B-201ENST00000360876 ZCCHC6Q5VYS8 1495 aaKnown RBP30.07■■■□□ 2.4
EIF3B-201ENST00000360876 PPARGC1BQ86YN6 1023 aaKnown RBP29.99■■■□□ 2.39
EIF3B-201ENST00000360876 LOC105371045A0A1W2PR82 267 aa29.92■■■□□ 2.38
EIF3B-201ENST00000360876 HRCP23327 699 aa29.88■■■□□ 2.37
EIF3B-201ENST00000360876 EHMT2Q96KQ7 1210 aa29.64■■■□□ 2.34
EIF3B-201ENST00000360876 CCDC180Q9P1Z9 1646 aa29.45■■■□□ 2.3
EIF3B-201ENST00000360876 FAM9AQ8IZU1 332 aaPredicted RBP29.36■■■□□ 2.29
EIF3B-201ENST00000360876 TRIM41Q8WV44 630 aa28.89■■■□□ 2.21
EIF3B-201ENST00000360876 TRIM26Q12899 539 aaPredicted RBP28.88■■■□□ 2.21
EIF3B-201ENST00000360876 DCAF1Q9Y4B6 1507 aa28.81■■■□□ 2.2
EIF3B-201ENST00000360876 SCRIBQ14160 1630 aa28.72■■■□□ 2.19
EIF3B-201ENST00000360876 TTBK1Q5TCY1 1321 aaPredicted RBP28.66■■■□□ 2.18
EIF3B-201ENST00000360876 RSF1Q96T23 1441 aaPredicted RBP28.58■■■□□ 2.17
EIF3B-201ENST00000360876 RB1CC1Q8TDY2 1594 aa28.44■■■□□ 2.14
EIF3B-201ENST00000360876 ABCC9O60706 1549 aa28.41■■■□□ 2.14
EIF3B-201ENST00000360876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.3■■■□□ 2.12
EIF3B-201ENST00000360876 CECR2Q9BXF3 1484 aa28.28■■■□□ 2.12
EIF3B-201ENST00000360876 SCAF1Q9H7N4 1312 aaKnown RBP28.07■■■□□ 2.08
EIF3B-201ENST00000360876 ZEB1P37275 1124 aaPredicted RBP28.05■■■□□ 2.08
EIF3B-201ENST00000360876 CCER1Q8TC90 406 aaPredicted RBP28.03■■■□□ 2.08
EIF3B-201ENST00000360876 MROH2BQ7Z745 1585 aa28.01■■■□□ 2.08
EIF3B-201ENST00000360876 WIZO95785 1651 aa27.88■■■□□ 2.05
EIF3B-201ENST00000360876 RANGAP1P46060 587 aaPredicted RBP27.74■■■□□ 2.03
EIF3B-201ENST00000360876 ABCC8Q09428 1581 aa27.67■■■□□ 2.02
EIF3B-201ENST00000360876 NEUROD1Q13562 356 aa27.66■■■□□ 2.02
EIF3B-201ENST00000360876 UBTFP17480 764 aaKnown RBP27.66■■■□□ 2.02
EIF3B-201ENST00000360876 PABPN1Q86U42 306 aaKnown RBP eCLIP27.59■■■□□ 2.015e-7■■■□□ 16.4
EIF3B-201ENST00000360876 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
EIF3B-201ENST00000360876 YTHDC1Q96MU7 727 aaKnown RBP27.55■■■□□ 2
EIF3B-201ENST00000360876 DIEXFQ68CQ4 756 aaKnown RBP27.54■■■□□ 2
EIF3B-201ENST00000360876 SOGA1O94964 1423 aa27.52■■■□□ 2
EIF3B-201ENST00000360876 HNRNPUL2Q1KMD3 747 aaKnown RBP27.48■■□□□ 1.99
EIF3B-201ENST00000360876 RUSC2Q8N2Y8 1516 aa27.45■■□□□ 1.98
EIF3B-201ENST00000360876 GTF3C3Q9Y5Q9 886 aa27.43■■□□□ 1.98
EIF3B-201ENST00000360876 ACIN1Q9UKV3 1341 aaKnown RBP27.42■■□□□ 1.98
EIF3B-201ENST00000360876 NACADO15069 1562 aa27.4■■□□□ 1.98
EIF3B-201ENST00000360876 CEP162Q5TB80 1403 aa27.36■■□□□ 1.97
EIF3B-201ENST00000360876 CSRNP3Q8WYN3 585 aa27.28■■□□□ 1.96
EIF3B-201ENST00000360876 BAZ1AQ9NRL2 1556 aaPredicted RBP27.26■■□□□ 1.95
EIF3B-201ENST00000360876 EIF4G1Q04637 1599 aaKnown RBP27.13■■□□□ 1.93
EIF3B-201ENST00000360876 CENPBP07199 599 aaPredicted RBP27.1■■□□□ 1.93
EIF3B-201ENST00000360876 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
EIF3B-201ENST00000360876 PELP1Q8IZL8 1130 aaKnown RBP27.05■■□□□ 1.92
EIF3B-201ENST00000360876 MIER1Q8N108 512 aa27.05■■□□□ 1.92
EIF3B-201ENST00000360876 ZNF316A6NFI3 1004 aaPredicted RBP27.04■■□□□ 1.92
EIF3B-201ENST00000360876 TOP2AP11388 1531 aaKnown RBP27.03■■□□□ 1.92
EIF3B-201ENST00000360876 TNIKQ9UKE5 1360 aa27.01■■□□□ 1.91
EIF3B-201ENST00000360876 SMARCA4P51532 1647 aa27■■□□□ 1.91
EIF3B-201ENST00000360876 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.92e-7■□□□□ 9.5
EIF3B-201ENST00000360876 APLP2Q06481 763 aa26.9■■□□□ 1.9
EIF3B-201ENST00000360876 ITGAEP38570 1179 aa26.83■■□□□ 1.89
EIF3B-201ENST00000360876 GOLGA3Q08378 1498 aa26.81■■□□□ 1.88
EIF3B-201ENST00000360876 CLIP1P30622 1438 aa26.78■■□□□ 1.88
EIF3B-201ENST00000360876 UNC13AQ9UPW8 1703 aa26.72■■□□□ 1.87
EIF3B-201ENST00000360876 RAPGEF2Q9Y4G8 1499 aa26.69■■□□□ 1.86
EIF3B-201ENST00000360876 SYNJ1O43426 1573 aa26.68■■□□□ 1.86
EIF3B-201ENST00000360876 KANK4Q5T7N3 995 aaPredicted RBP26.62■■□□□ 1.85
EIF3B-201ENST00000360876 EEA1Q15075 1411 aa26.59■■□□□ 1.85
EIF3B-201ENST00000360876 CEP164Q9UPV0 1460 aa26.56■■□□□ 1.84
EIF3B-201ENST00000360876 VPS8Q8N3P4 1428 aa26.5■■□□□ 1.83
EIF3B-201ENST00000360876 BICRAQ9NZM4 1560 aa26.46■■□□□ 1.83
EIF3B-201ENST00000360876 BAZ1BQ9UIG0 1483 aaKnown RBP26.42■■□□□ 1.82
EIF3B-201ENST00000360876 KCNH8Q96L42 1107 aa26.4■■□□□ 1.82
EIF3B-201ENST00000360876 ATP1B4Q9UN42 357 aaPredicted RBP26.39■■□□□ 1.82
EIF3B-201ENST00000360876 ATAD2BQ9ULI0 1458 aa26.38■■□□□ 1.81
EIF3B-201ENST00000360876 KIF21BO75037 1637 aa26.36■■□□□ 1.81
EIF3B-201ENST00000360876 P3H3Q8IVL6 736 aa26.33■■□□□ 1.8
EIF3B-201ENST00000360876 HIRIP3Q9BW71 556 aaPredicted RBP26.32■■□□□ 1.8
EIF3B-201ENST00000360876 DHX57Q6P158 1386 aaKnown RBP26.29■■□□□ 1.8
EIF3B-201ENST00000360876 BCANQ96GW7 911 aa26.27■■□□□ 1.8
EIF3B-201ENST00000360876 ARAP1Q96P48 1450 aa26.18■■□□□ 1.78
EIF3B-201ENST00000360876 FAM50AQ14320 339 aaKnown RBP26.15■■□□□ 1.78
EIF3B-201ENST00000360876 SIN3AQ96ST3 1273 aa26.15■■□□□ 1.78
EIF3B-201ENST00000360876 SUPT16HQ9Y5B9 1047 aaKnown RBP26.13■■□□□ 1.77
EIF3B-201ENST00000360876 DDX10Q13206 875 aaKnown RBP26.07■■□□□ 1.76
EIF3B-201ENST00000360876 PEG3Q9GZU2 1588 aa26.01■■□□□ 1.75
EIF3B-201ENST00000360876 CCNB3Q8WWL7 1395 aa25.99■■□□□ 1.75
EIF3B-201ENST00000360876 TOP2BQ02880 1626 aa25.98■■□□□ 1.75
EIF3B-201ENST00000360876 PRXQ9BXM0 1461 aa25.97■■□□□ 1.75
EIF3B-201ENST00000360876 CUX1P39880 1505 aa25.96■■□□□ 1.75
EIF3B-201ENST00000360876 RAB3GAP2Q9H2M9 1393 aa25.95■■□□□ 1.74
EIF3B-201ENST00000360876 KIF27Q86VH2 1401 aa25.91■■□□□ 1.74
EIF3B-201ENST00000360876 ARHGAP35Q9NRY4 1499 aa25.9■■□□□ 1.74
EIF3B-201ENST00000360876 TRIM52Q96A61 297 aa25.9■■□□□ 1.74
EIF3B-201ENST00000360876 CUX2O14529 1486 aa25.84■■□□□ 1.73
EIF3B-201ENST00000360876 FKBP8Q14318 412 aa25.82■■□□□ 1.72
EIF3B-201ENST00000360876 TSHZ2Q9NRE2 1034 aa25.8■■□□□ 1.72
EIF3B-201ENST00000360876 RRBP1Q9P2E9 1410 aaKnown RBP25.79■■□□□ 1.72
EIF3B-201ENST00000360876 PHLDB1Q86UU1 1377 aa25.78■■□□□ 1.72
EIF3B-201ENST00000360876 CLSPNQ9HAW4 1339 aa25.77■■□□□ 1.72
EIF3B-201ENST00000360876 IGF1RP08069 1367 aa25.73■■□□□ 1.71
EIF3B-201ENST00000360876 ARID3CA6NKF2 412 aa25.72■■□□□ 1.71
EIF3B-201ENST00000360876 ERICH3Q5RHP9 1530 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms