RNA–Protein interactions for RNA: ENST00000465176.5

PCCB-205, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 570 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-205ENST00000465176 NISCHQ9Y2I1 1504 aa25.47■■□□□ 1.67
PCCB-205ENST00000465176 ABCC9O60706 1549 aa23.57■■□□□ 1.36
PCCB-205ENST00000465176 CCDC180Q9P1Z9 1646 aa23.14■■□□□ 1.29
PCCB-205ENST00000465176 DNAJC5BQ9UF47 199 aa22.54■■□□□ 1.2
PCCB-205ENST00000465176 RB1CC1Q8TDY2 1594 aa22.24■■□□□ 1.15
PCCB-205ENST00000465176 NACADO15069 1562 aa21.96■■□□□ 1.11
PCCB-205ENST00000465176 PABPN1Q86U42 306 aaKnown RBP eCLIP21.81■■□□□ 1.08
PCCB-205ENST00000465176 UNC13AQ9UPW8 1703 aa21.76■■□□□ 1.07
PCCB-205ENST00000465176 BICRAQ9NZM4 1560 aa21.63■■□□□ 1.05
PCCB-205ENST00000465176 DCAF8L2P0C7V8 631 aa21.58■■□□□ 1.05
PCCB-205ENST00000465176 MYO15BQ96JP2 1530 aa21.52■■□□□ 1.04
PCCB-205ENST00000465176 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
PCCB-205ENST00000465176 CECR2Q9BXF3 1484 aa21.3■■□□□ 1
PCCB-205ENST00000465176 CC2D2AQ9P2K1 1620 aa21.29■■□□□ 1
PCCB-205ENST00000465176 EIF4G1Q04637 1599 aaKnown RBP21.13■□□□□ 0.97
PCCB-205ENST00000465176 DNAJC5Q9H3Z4 198 aa21.09■□□□□ 0.97
PCCB-205ENST00000465176 DCAF1Q9Y4B6 1507 aa21.04■□□□□ 0.96
PCCB-205ENST00000465176 ZCCHC6Q5VYS8 1495 aaKnown RBP21.03■□□□□ 0.96
PCCB-205ENST00000465176 SCRIBQ14160 1630 aa21■□□□□ 0.95
PCCB-205ENST00000465176 CUX2O14529 1486 aa20.56■□□□□ 0.88
PCCB-205ENST00000465176 ERCC6Q03468 1493 aa20.38■□□□□ 0.85
PCCB-205ENST00000465176 NCAPD3P42695 1498 aa20.27■□□□□ 0.84
PCCB-205ENST00000465176 ATAD2BQ9ULI0 1458 aa20.13■□□□□ 0.81
PCCB-205ENST00000465176 HMGXB3Q12766 1538 aa20.11■□□□□ 0.81
PCCB-205ENST00000465176 NESP48681 1621 aa20.1■□□□□ 0.81
PCCB-205ENST00000465176 SMARCA2P51531 1590 aa20.06■□□□□ 0.8
PCCB-205ENST00000465176 THOC2Q8NI27 1593 aaKnown RBP20.06■□□□□ 0.8
PCCB-205ENST00000465176 SMARCA4P51532 1647 aa20■□□□□ 0.79
PCCB-205ENST00000465176 LAMC3Q9Y6N6 1575 aa19.91■□□□□ 0.78
PCCB-205ENST00000465176 BAZ1BQ9UIG0 1483 aaKnown RBP19.91■□□□□ 0.78
PCCB-205ENST00000465176 TRIM41Q8WV44 630 aa19.9■□□□□ 0.78
PCCB-205ENST00000465176 KIF21AQ7Z4S6 1674 aa19.85■□□□□ 0.77
PCCB-205ENST00000465176 PEG3Q9GZU2 1588 aa19.83■□□□□ 0.77
PCCB-205ENST00000465176 BAZ1AQ9NRL2 1556 aaPredicted RBP19.82■□□□□ 0.76
PCCB-205ENST00000465176 PDS5BQ9NTI5 1447 aa19.78■□□□□ 0.76
PCCB-205ENST00000465176 MRC2Q9UBG0 1479 aa19.67■□□□□ 0.74
PCCB-205ENST00000465176 WDR62O43379 1518 aa19.66■□□□□ 0.74
PCCB-205ENST00000465176 MROH2BQ7Z745 1585 aa19.62■□□□□ 0.73
PCCB-205ENST00000465176 CADPSQ9ULU8 1353 aa19.6■□□□□ 0.73
PCCB-205ENST00000465176 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
PCCB-205ENST00000465176 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
PCCB-205ENST00000465176 FANCD2Q9BXW9 1451 aa19.41■□□□□ 0.7
PCCB-205ENST00000465176 WIZO95785 1651 aa19.36■□□□□ 0.69
PCCB-205ENST00000465176 RIMBP3CA6NJZ7 1639 aa19.34■□□□□ 0.69
PCCB-205ENST00000465176 RIMBP3BA6NNM3 1639 aa19.34■□□□□ 0.69
PCCB-205ENST00000465176 RIMBP3Q9UFD9 1639 aa19.34■□□□□ 0.69
PCCB-205ENST00000465176 CFTRP13569 1480 aa19.29■□□□□ 0.68
PCCB-205ENST00000465176 URB2Q14146 1524 aaKnown RBP19.29■□□□□ 0.68
PCCB-205ENST00000465176 ARHGEF11O15085 1522 aa19.22■□□□□ 0.67
PCCB-205ENST00000465176 ZNF608Q9ULD9 1512 aaPredicted RBP19.12■□□□□ 0.65
PCCB-205ENST00000465176 IFT140Q96RY7 1462 aa19.11■□□□□ 0.65
PCCB-205ENST00000465176 PRDM2Q13029 1718 aa19.11■□□□□ 0.65
PCCB-205ENST00000465176 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
PCCB-205ENST00000465176 EIF4G3O43432 1585 aaKnown RBP19.02■□□□□ 0.64
PCCB-205ENST00000465176 CYB5RLQ6IPT4 315 aa19.02■□□□□ 0.64
PCCB-205ENST00000465176 RSF1Q96T23 1441 aaPredicted RBP19.01■□□□□ 0.63
PCCB-205ENST00000465176 ARAP1Q96P48 1450 aa19■□□□□ 0.63
PCCB-205ENST00000465176 TOPBP1Q92547 1522 aa18.99■□□□□ 0.63
PCCB-205ENST00000465176 CHD1O14646 1710 aa18.97■□□□□ 0.63
PCCB-205ENST00000465176 TRHP20396 242 aaPredicted RBP18.96■□□□□ 0.63
PCCB-205ENST00000465176 ABCC8Q09428 1581 aa18.9■□□□□ 0.62
PCCB-205ENST00000465176 DNMBPQ6XZF7 1577 aa18.88■□□□□ 0.61
PCCB-205ENST00000465176 TARBP1Q13395 1621 aaKnown RBP18.88■□□□□ 0.61
PCCB-205ENST00000465176 AQRO60306 1485 aaKnown RBP eCLIP18.85■□□□□ 0.613e-6■■■■□ 21.1
PCCB-205ENST00000465176 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
PCCB-205ENST00000465176 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
PCCB-205ENST00000465176 FBLN2P98095 1184 aa18.77■□□□□ 0.6
PCCB-205ENST00000465176 CLASP1Q7Z460 1538 aa18.76■□□□□ 0.59
PCCB-205ENST00000465176 POLA1P09884 1462 aaPredicted RBP18.76■□□□□ 0.59
PCCB-205ENST00000465176 SNAPC4Q5SXM2 1469 aa18.69■□□□□ 0.58
PCCB-205ENST00000465176 SYNJ1O43426 1573 aa18.68■□□□□ 0.58
PCCB-205ENST00000465176 WDR97A6NE52 1622 aa18.67■□□□□ 0.58
PCCB-205ENST00000465176 RAD54L2Q9Y4B4 1467 aa18.67■□□□□ 0.58
PCCB-205ENST00000465176 TDRD9Q8NDG6 1382 aaKnown RBP18.65■□□□□ 0.58
PCCB-205ENST00000465176 MAGI1Q96QZ7 1491 aaPredicted RBP18.63■□□□□ 0.57
PCCB-205ENST00000465176 SOGA1O94964 1423 aa18.62■□□□□ 0.57
PCCB-205ENST00000465176 CHMP7Q8WUX9 453 aaPredicted RBP18.58■□□□□ 0.56
PCCB-205ENST00000465176 SYNJ2O15056 1496 aa18.56■□□□□ 0.56
PCCB-205ENST00000465176 FGD5Q6ZNL6 1462 aa18.56■□□□□ 0.56
PCCB-205ENST00000465176 GRIN2BQ13224 1484 aa18.55■□□□□ 0.56
PCCB-205ENST00000465176 GAPVD1Q14C86 1478 aa18.55■□□□□ 0.56
PCCB-205ENST00000465176 PBRM1Q86U86 1689 aa18.47■□□□□ 0.55
PCCB-205ENST00000465176 CUX1P39880 1505 aa18.47■□□□□ 0.55
PCCB-205ENST00000465176 ERCC6L2Q5T890 1561 aa18.4■□□□□ 0.54
PCCB-205ENST00000465176 ABCA5Q8WWZ7 1642 aa18.38■□□□□ 0.53
PCCB-205ENST00000465176 ABCA10Q8WWZ4 1543 aa18.33■□□□□ 0.53
PCCB-205ENST00000465176 KIF13AQ9H1H9 1805 aa18.33■□□□□ 0.53
PCCB-205ENST00000465176 CEP170Q5SW79 1584 aa18.33■□□□□ 0.52
PCCB-205ENST00000465176 GRIN2AQ12879 1464 aa18.33■□□□□ 0.52
PCCB-205ENST00000465176 NUP160Q12769 1436 aa18.3■□□□□ 0.52
PCCB-205ENST00000465176 SHROOM2Q13796 1616 aa18.29■□□□□ 0.52
PCCB-205ENST00000465176 ADAMTS12P58397 1594 aa18.28■□□□□ 0.52
PCCB-205ENST00000465176 FHAD1B1AJZ9 1412 aa18.16■□□□□ 0.5
PCCB-205ENST00000465176 ABCC10Q5T3U5 1492 aa18.14■□□□□ 0.5
PCCB-205ENST00000465176 WRNQ14191 1432 aaPredicted RBP eCLIP18.13■□□□□ 0.49
PCCB-205ENST00000465176 MAPKBP1O60336 1514 aa18.12■□□□□ 0.49
PCCB-205ENST00000465176 PRG4Q92954 1404 aaPredicted RBP18.11■□□□□ 0.49
PCCB-205ENST00000465176 DIP2BQ9P265 1576 aa18.11■□□□□ 0.49
PCCB-205ENST00000465176 ERICH3Q5RHP9 1530 aa18.09■□□□□ 0.49
PCCB-205ENST00000465176 FAM69CQ0P6D2 419 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms