RNA–Protein interactions for RNA: ENST00000519259.5

SREK1-206, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 9,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-206ENST00000519259 NISCHQ9Y2I1 1504 aa8.03□□□□□ -1.12
SREK1-206ENST00000519259 DCAF8L2P0C7V8 631 aa7.19□□□□□ -1.26
SREK1-206ENST00000519259 ABCC9O60706 1549 aa6.95□□□□□ -1.3
SREK1-206ENST00000519259 CCDC180Q9P1Z9 1646 aa6.81□□□□□ -1.32
SREK1-206ENST00000519259 MYO15BQ96JP2 1530 aa6.78□□□□□ -1.32
SREK1-206ENST00000519259 DCAF1Q9Y4B6 1507 aa6.74□□□□□ -1.33
SREK1-206ENST00000519259 NACADO15069 1562 aa6.72□□□□□ -1.33
SREK1-206ENST00000519259 RB1CC1Q8TDY2 1594 aa6.71□□□□□ -1.34
SREK1-206ENST00000519259 ZCCHC6Q5VYS8 1495 aaKnown RBP6.67□□□□□ -1.34
SREK1-206ENST00000519259 SHROOM4Q9ULL8 1493 aa6.66□□□□□ -1.34
SREK1-206ENST00000519259 PABPN1Q86U42 306 aaKnown RBP eCLIP6.63□□□□□ -1.352e-9■□□□□ 8.9
SREK1-206ENST00000519259 FAM9AQ8IZU1 332 aaPredicted RBP6.51□□□□□ -1.37
SREK1-206ENST00000519259 SCRIBQ14160 1630 aa6.45□□□□□ -1.38
SREK1-206ENST00000519259 SUPT5HO00267 1087 aaKnown RBP6.42□□□□□ -1.38
SREK1-206ENST00000519259 NCAPD3P42695 1498 aa6.34□□□□□ -1.39
SREK1-206ENST00000519259 CECR2Q9BXF3 1484 aa6.32□□□□□ -1.4
SREK1-206ENST00000519259 PDS5BQ9NTI5 1447 aa6.31□□□□□ -1.4
SREK1-206ENST00000519259 BAZ1AQ9NRL2 1556 aaPredicted RBP6.3□□□□□ -1.4
SREK1-206ENST00000519259 SMARCA2P51531 1590 aa6.27□□□□□ -1.41
SREK1-206ENST00000519259 BAZ1BQ9UIG0 1483 aaKnown RBP6.26□□□□□ -1.41
SREK1-206ENST00000519259 CADPSQ9ULU8 1353 aa6.26□□□□□ -1.41
SREK1-206ENST00000519259 ATAD2BQ9ULI0 1458 aa6.26□□□□□ -1.41
SREK1-206ENST00000519259 RSF1Q96T23 1441 aaPredicted RBP6.24□□□□□ -1.41
SREK1-206ENST00000519259 TRIM41Q8WV44 630 aa6.2□□□□□ -1.42
SREK1-206ENST00000519259 ERCC6Q03468 1493 aa6.18□□□□□ -1.42
SREK1-206ENST00000519259 DNAJC5BQ9UF47 199 aa6.18□□□□□ -1.42
SREK1-206ENST00000519259 ABCC8Q09428 1581 aa6.18□□□□□ -1.42
SREK1-206ENST00000519259 EIF4G1Q04637 1599 aaKnown RBP6.15□□□□□ -1.43
SREK1-206ENST00000519259 NPM1P06748 294 aaKnown RBP eCLIP6.13□□□□□ -1.43
SREK1-206ENST00000519259 HMGXB3Q12766 1538 aa6.12□□□□□ -1.43
SREK1-206ENST00000519259 APLP2Q06481 763 aa6.1□□□□□ -1.43
SREK1-206ENST00000519259 CHMP7Q8WUX9 453 aaPredicted RBP6.1□□□□□ -1.43
SREK1-206ENST00000519259 BICRAQ9NZM4 1560 aa6.09□□□□□ -1.43
SREK1-206ENST00000519259 EEA1Q15075 1411 aa6.08□□□□□ -1.44
SREK1-206ENST00000519259 MROH2BQ7Z745 1585 aa6.07□□□□□ -1.44
SREK1-206ENST00000519259 OSCARQ8IYS5 282 aa6.07□□□□□ -1.44
SREK1-206ENST00000519259 CEP164Q9UPV0 1460 aa6.07□□□□□ -1.44
SREK1-206ENST00000519259 CSRNP3Q8WYN3 585 aa6.06□□□□□ -1.44
SREK1-206ENST00000519259 FBLN2P98095 1184 aa6.05□□□□□ -1.44
SREK1-206ENST00000519259 WRNQ14191 1432 aaPredicted RBP eCLIP6.04□□□□□ -1.44
SREK1-206ENST00000519259 CFTRP13569 1480 aa6.04□□□□□ -1.44
SREK1-206ENST00000519259 CDK11AQ9UQ88 783 aaPredicted RBP6.04□□□□□ -1.44
SREK1-206ENST00000519259 TOP2AP11388 1531 aaKnown RBP6.04□□□□□ -1.44
SREK1-206ENST00000519259 FANCD2Q9BXW9 1451 aa6.02□□□□□ -1.44
SREK1-206ENST00000519259 CUX2O14529 1486 aa6.02□□□□□ -1.45
SREK1-206ENST00000519259 MRC2Q9UBG0 1479 aa6.02□□□□□ -1.45
SREK1-206ENST00000519259 SOGA1O94964 1423 aa6.01□□□□□ -1.45
SREK1-206ENST00000519259 KIF27Q86VH2 1401 aa6.01□□□□□ -1.45
SREK1-206ENST00000519259 IFT140Q96RY7 1462 aa6.01□□□□□ -1.45
SREK1-206ENST00000519259 UBTFP17480 764 aaKnown RBP6.01□□□□□ -1.45
SREK1-206ENST00000519259 CCDC88BA6NC98 1476 aa5.99□□□□□ -1.45
SREK1-206ENST00000519259 SMARCA4P51532 1647 aa5.99□□□□□ -1.45
SREK1-206ENST00000519259 PEG3Q9GZU2 1588 aa5.99□□□□□ -1.45
SREK1-206ENST00000519259 CC2D2AQ9P2K1 1620 aa5.98□□□□□ -1.45
SREK1-206ENST00000519259 CHIC1Q5VXU3 224 aa5.97□□□□□ -1.45
SREK1-206ENST00000519259 CARMIL2Q6F5E8 1435 aa5.96□□□□□ -1.45
SREK1-206ENST00000519259 LAMC3Q9Y6N6 1575 aa5.96□□□□□ -1.45
SREK1-206ENST00000519259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.94□□□□□ -1.46
SREK1-206ENST00000519259 HNRNPUL2Q1KMD3 747 aaKnown RBP5.94□□□□□ -1.46
SREK1-206ENST00000519259 ACIN1Q9UKV3 1341 aaKnown RBP5.92□□□□□ -1.46
SREK1-206ENST00000519259 CARMIL1Q5VZK9 1371 aa5.92□□□□□ -1.46
SREK1-206ENST00000519259 TDRD9Q8NDG6 1382 aaKnown RBP5.92□□□□□ -1.46
SREK1-206ENST00000519259 GRIN2BQ13224 1484 aa5.9□□□□□ -1.46
SREK1-206ENST00000519259 FHAD1B1AJZ9 1412 aa5.9□□□□□ -1.46
SREK1-206ENST00000519259 JPH4Q96JJ6 628 aa5.9□□□□□ -1.47
SREK1-206ENST00000519259 PLEKHD1A6NEE1 506 aa5.89□□□□□ -1.47
SREK1-206ENST00000519259 DNAJC5Q9H3Z4 198 aa5.89□□□□□ -1.47
SREK1-206ENST00000519259 ATP1B4Q9UN42 357 aaPredicted RBP5.88□□□□□ -1.47
SREK1-206ENST00000519259 GOLGA3Q08378 1498 aa5.85□□□□□ -1.47
SREK1-206ENST00000519259 IGF1RP08069 1367 aa5.84□□□□□ -1.47
SREK1-206ENST00000519259 TNIKQ9UKE5 1360 aa5.84□□□□□ -1.48
SREK1-206ENST00000519259 MYT1LQ9UL68 1186 aa5.84□□□□□ -1.48
SREK1-206ENST00000519259 TOPBP1Q92547 1522 aa5.83□□□□□ -1.48
SREK1-206ENST00000519259 PTPRGP23470 1445 aa5.83□□□□□ -1.48
SREK1-206ENST00000519259 GAPVD1Q14C86 1478 aa5.83□□□□□ -1.48
SREK1-206ENST00000519259 NESP48681 1621 aa5.82□□□□□ -1.48
SREK1-206ENST00000519259 RAPGEF2Q9Y4G8 1499 aa5.82□□□□□ -1.48
SREK1-206ENST00000519259 TRHP20396 242 aaPredicted RBP5.82□□□□□ -1.48
SREK1-206ENST00000519259 FGD5Q6ZNL6 1462 aa5.81□□□□□ -1.48
SREK1-206ENST00000519259 MAGI1Q96QZ7 1491 aaPredicted RBP5.81□□□□□ -1.48
SREK1-206ENST00000519259 RSPH4AQ5TD94 716 aa5.81□□□□□ -1.48
SREK1-206ENST00000519259 ABCA10Q8WWZ4 1543 aa5.8□□□□□ -1.48
SREK1-206ENST00000519259 ESF1Q9H501 851 aaKnown RBP5.8□□□□□ -1.48
SREK1-206ENST00000519259 CYB5RLQ6IPT4 315 aa5.79□□□□□ -1.48
SREK1-206ENST00000519259 EFCAB2Q5VUJ9 269 aa5.79□□□□□ -1.48
SREK1-206ENST00000519259 POLA1P09884 1462 aaPredicted RBP5.79□□□□□ -1.48
SREK1-206ENST00000519259 DNMBPQ6XZF7 1577 aa5.79□□□□□ -1.48
SREK1-206ENST00000519259 PHLDB1Q86UU1 1377 aa5.78□□□□□ -1.48
SREK1-206ENST00000519259 TTBK1Q5TCY1 1321 aaPredicted RBP5.78□□□□□ -1.48
SREK1-206ENST00000519259 KIAA0586Q9BVV6 1533 aa5.78□□□□□ -1.48
SREK1-206ENST00000519259 SYNJ2O15056 1496 aa5.78□□□□□ -1.48
SREK1-206ENST00000519259 TSPY4P0CV99 314 aa5.78□□□□□ -1.48
SREK1-206ENST00000519259 TSPY10P0CW01 314 aa5.78□□□□□ -1.48
SREK1-206ENST00000519259 AQRO60306 1485 aaKnown RBP eCLIP5.77□□□□□ -1.496e-7■■□□□ 13.2
SREK1-206ENST00000519259 RANGAP1P46060 587 aaPredicted RBP5.76□□□□□ -1.49
SREK1-206ENST00000519259 URB2Q14146 1524 aaKnown RBP5.75□□□□□ -1.49
SREK1-206ENST00000519259 FMN1Q68DA7 1419 aa5.75□□□□□ -1.49
SREK1-206ENST00000519259 RAD54L2Q9Y4B4 1467 aa5.74□□□□□ -1.49
SREK1-206ENST00000519259 WDR62O43379 1518 aa5.74□□□□□ -1.49
SREK1-206ENST00000519259 CLIP1P30622 1438 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 271.6 ms