Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF407Q9C0G0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF407Q9C0G0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF407Q9C0G0 AL024507.2-201ENST00000606070 2574 ntBASIC18.49■□□□□ 0.55
ZNF407Q9C0G0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF407Q9C0G0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF407Q9C0G0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF407Q9C0G0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.49■□□□□ 0.55
ZNF407Q9C0G0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF407Q9C0G0 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF407Q9C0G0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF407Q9C0G0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.49■□□□□ 0.55
ZNF407Q9C0G0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF407Q9C0G0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF407Q9C0G0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF407Q9C0G0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF407Q9C0G0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 AC128676.1-201ENST00000454392 318 ntBASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 AF106564.1-201ENST00000607058 2553 ntBASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 AC244015.2-201ENST00000616358 1861 ntBASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 AL158047.1-201ENST00000445918 881 ntBASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF407Q9C0G0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 AC069544.1-201ENST00000609399 999 ntBASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF407Q9C0G0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ZNF407Q9C0G0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ZNF407Q9C0G0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF407Q9C0G0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ZNF407Q9C0G0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.45■□□□□ 0.54
ZNF407Q9C0G0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF407Q9C0G0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF407Q9C0G0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF407Q9C0G0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF407Q9C0G0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.45■□□□□ 0.54
ZNF407Q9C0G0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF407Q9C0G0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms