RNA–Protein interactions for RNA: ENST00000452404.6

NCBP2-207, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 2 BASIC

Gene NCBP2, Length 1,133 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-207ENST00000452404 NISCHQ9Y2I1 1504 aa49.63■■■■■ 5.54
NCBP2-207ENST00000452404 CCDC180Q9P1Z9 1646 aa44.22■■■■■ 4.67
NCBP2-207ENST00000452404 ABCC9O60706 1549 aa43.68■■■■■ 4.58
NCBP2-207ENST00000452404 RB1CC1Q8TDY2 1594 aa41.83■■■■■ 4.29
NCBP2-207ENST00000452404 NACADO15069 1562 aa41.69■■■■■ 4.26
NCBP2-207ENST00000452404 DCAF8L2P0C7V8 631 aa41.65■■■■■ 4.26
NCBP2-207ENST00000452404 MYO15BQ96JP2 1530 aa41.33■■■■■ 4.21
NCBP2-207ENST00000452404 ZCCHC6Q5VYS8 1495 aaKnown RBP41.27■■■■■ 4.2
NCBP2-207ENST00000452404 DCAF1Q9Y4B6 1507 aa41.03■■■■■ 4.16
NCBP2-207ENST00000452404 UNC13AQ9UPW8 1703 aa40.81■■■■■ 4.12
NCBP2-207ENST00000452404 PABPN1Q86U42 306 aaKnown RBP eCLIP40.79■■■■■ 4.12
NCBP2-207ENST00000452404 BICRAQ9NZM4 1560 aa40.59■■■■■ 4.09
NCBP2-207ENST00000452404 DNAJC5BQ9UF47 199 aa40.44■■■■■ 4.06
NCBP2-207ENST00000452404 SCRIBQ14160 1630 aa40.38■■■■■ 4.05
NCBP2-207ENST00000452404 SHROOM4Q9ULL8 1493 aa40.12■■■■■ 4.01
NCBP2-207ENST00000452404 EIF4G1Q04637 1599 aaKnown RBP39.55■■■■□ 3.92
NCBP2-207ENST00000452404 CC2D2AQ9P2K1 1620 aa39.47■■■■□ 3.91
NCBP2-207ENST00000452404 CECR2Q9BXF3 1484 aa39.29■■■■□ 3.88
NCBP2-207ENST00000452404 SMARCA4P51532 1647 aa38.57■■■■□ 3.77
NCBP2-207ENST00000452404 NCAPD3P42695 1498 aa38.5■■■■□ 3.75
NCBP2-207ENST00000452404 BAZ1AQ9NRL2 1556 aaPredicted RBP38.48■■■■□ 3.75
NCBP2-207ENST00000452404 ATAD2BQ9ULI0 1458 aa38.47■■■■□ 3.75
NCBP2-207ENST00000452404 SMARCA2P51531 1590 aa38.39■■■■□ 3.74
NCBP2-207ENST00000452404 HMGXB3Q12766 1538 aa38.26■■■■□ 3.72
NCBP2-207ENST00000452404 MROH2BQ7Z745 1585 aa38.26■■■■□ 3.72
NCBP2-207ENST00000452404 PEG3Q9GZU2 1588 aa38.19■■■■□ 3.7
NCBP2-207ENST00000452404 BAZ1BQ9UIG0 1483 aaKnown RBP38.14■■■■□ 3.7
NCBP2-207ENST00000452404 WIZO95785 1651 aa37.8■■■■□ 3.64
NCBP2-207ENST00000452404 RSF1Q96T23 1441 aaPredicted RBP37.7■■■■□ 3.63
NCBP2-207ENST00000452404 NESP48681 1621 aa37.7■■■■□ 3.63
NCBP2-207ENST00000452404 ERCC6Q03468 1493 aa37.68■■■■□ 3.62
NCBP2-207ENST00000452404 LAMC3Q9Y6N6 1575 aa37.52■■■■□ 3.6
NCBP2-207ENST00000452404 CUX2O14529 1486 aa37.39■■■■□ 3.58
NCBP2-207ENST00000452404 TOP2AP11388 1531 aaKnown RBP37.39■■■■□ 3.58
NCBP2-207ENST00000452404 CADPSQ9ULU8 1353 aa37.37■■■■□ 3.57
NCBP2-207ENST00000452404 PDS5BQ9NTI5 1447 aa37.3■■■■□ 3.56
NCBP2-207ENST00000452404 KIF21AQ7Z4S6 1674 aa37.18■■■■□ 3.54
NCBP2-207ENST00000452404 THOC2Q8NI27 1593 aaKnown RBP37.17■■■■□ 3.54
NCBP2-207ENST00000452404 CFTRP13569 1480 aa37.07■■■■□ 3.53
NCBP2-207ENST00000452404 CCDC88BA6NC98 1476 aa36.97■■■■□ 3.51
NCBP2-207ENST00000452404 FANCD2Q9BXW9 1451 aa36.94■■■■□ 3.5
NCBP2-207ENST00000452404 MRC2Q9UBG0 1479 aa36.94■■■■□ 3.5
NCBP2-207ENST00000452404 CEP164Q9UPV0 1460 aa36.93■■■■□ 3.5
NCBP2-207ENST00000452404 WDR62O43379 1518 aa36.82■■■■□ 3.48
NCBP2-207ENST00000452404 DNAJC5Q9H3Z4 198 aa36.67■■■■□ 3.46
NCBP2-207ENST00000452404 PRDM2Q13029 1718 aa36.65■■■■□ 3.46
NCBP2-207ENST00000452404 URB2Q14146 1524 aaKnown RBP36.59■■■■□ 3.45
NCBP2-207ENST00000452404 SUPT5HO00267 1087 aaKnown RBP36.5■■■■□ 3.43
NCBP2-207ENST00000452404 TOPBP1Q92547 1522 aa36.3■■■■□ 3.4
NCBP2-207ENST00000452404 ABCC8Q09428 1581 aa36.26■■■■□ 3.39
NCBP2-207ENST00000452404 DNMBPQ6XZF7 1577 aa36.22■■■■□ 3.39
NCBP2-207ENST00000452404 IFT140Q96RY7 1462 aa36.17■■■■□ 3.38
NCBP2-207ENST00000452404 ZNF608Q9ULD9 1512 aaPredicted RBP36.04■■■■□ 3.36
NCBP2-207ENST00000452404 POLA1P09884 1462 aaPredicted RBP35.98■■■■□ 3.35
NCBP2-207ENST00000452404 TARBP1Q13395 1621 aaKnown RBP35.92■■■■□ 3.34
NCBP2-207ENST00000452404 CUX1P39880 1505 aa35.91■■■■□ 3.34
NCBP2-207ENST00000452404 EIF4G3O43432 1585 aaKnown RBP35.86■■■■□ 3.33
NCBP2-207ENST00000452404 FGD5Q6ZNL6 1462 aa35.84■■■■□ 3.33
NCBP2-207ENST00000452404 RAD54L2Q9Y4B4 1467 aa35.84■■■■□ 3.33
NCBP2-207ENST00000452404 SOGA1O94964 1423 aa35.83■■■■□ 3.33
NCBP2-207ENST00000452404 AQRO60306 1485 aaKnown RBP eCLIP35.8■■■■□ 3.326e-6■□□□□ 8.5
NCBP2-207ENST00000452404 OSCARQ8IYS5 282 aa35.8■■■■□ 3.32
NCBP2-207ENST00000452404 TDRD9Q8NDG6 1382 aaKnown RBP35.69■■■■□ 3.3
NCBP2-207ENST00000452404 WDR97A6NE52 1622 aa35.59■■■■□ 3.29
NCBP2-207ENST00000452404 WRNQ14191 1432 aaPredicted RBP eCLIP35.55■■■■□ 3.28
NCBP2-207ENST00000452404 TOP2BQ02880 1626 aa35.48■■■■□ 3.27
NCBP2-207ENST00000452404 SYNJ1O43426 1573 aa35.47■■■■□ 3.27
NCBP2-207ENST00000452404 ABCA10Q8WWZ4 1543 aa35.47■■■■□ 3.27
NCBP2-207ENST00000452404 BIVM-ERCC5R4GMW8 1640 aa35.46■■■■□ 3.27
NCBP2-207ENST00000452404 FBLN2P98095 1184 aa35.46■■■■□ 3.27
NCBP2-207ENST00000452404 SNAPC4Q5SXM2 1469 aa35.46■■■■□ 3.27
NCBP2-207ENST00000452404 GRIN2BQ13224 1484 aa35.45■■■■□ 3.27
NCBP2-207ENST00000452404 CHD1O14646 1710 aa35.43■■■■□ 3.26
NCBP2-207ENST00000452404 GAPVD1Q14C86 1478 aa35.41■■■■□ 3.26
NCBP2-207ENST00000452404 MAGI1Q96QZ7 1491 aaPredicted RBP35.38■■■■□ 3.25
NCBP2-207ENST00000452404 TRIM41Q8WV44 630 aa35.34■■■■□ 3.25
NCBP2-207ENST00000452404 ABCA5Q8WWZ7 1642 aa35.34■■■■□ 3.25
NCBP2-207ENST00000452404 CHMP7Q8WUX9 453 aaPredicted RBP35.3■■■■□ 3.24
NCBP2-207ENST00000452404 PBRM1Q86U86 1689 aa35.3■■■■□ 3.24
NCBP2-207ENST00000452404 SYNJ2O15056 1496 aa35.26■■■■□ 3.23
NCBP2-207ENST00000452404 RIMBP3CA6NJZ7 1639 aa35.24■■■■□ 3.23
NCBP2-207ENST00000452404 RIMBP3BA6NNM3 1639 aa35.24■■■■□ 3.23
NCBP2-207ENST00000452404 RIMBP3Q9UFD9 1639 aa35.24■■■■□ 3.23
NCBP2-207ENST00000452404 ARHGEF11O15085 1522 aa35.21■■■■□ 3.23
NCBP2-207ENST00000452404 CLASP1Q7Z460 1538 aa35.09■■■■□ 3.21
NCBP2-207ENST00000452404 ADAMTS12P58397 1594 aa35.04■■■■□ 3.2
NCBP2-207ENST00000452404 ERICH3Q5RHP9 1530 aa35.03■■■■□ 3.2
NCBP2-207ENST00000452404 GRIN2AQ12879 1464 aa34.99■■■■□ 3.19
NCBP2-207ENST00000452404 FHAD1B1AJZ9 1412 aa34.98■■■■□ 3.19
NCBP2-207ENST00000452404 CYB5RLQ6IPT4 315 aa34.93■■■■□ 3.18
NCBP2-207ENST00000452404 ARAP1Q96P48 1450 aa34.91■■■■□ 3.18
NCBP2-207ENST00000452404 NUP160Q12769 1436 aa34.85■■■■□ 3.17
NCBP2-207ENST00000452404 KIF27Q86VH2 1401 aa34.83■■■■□ 3.17
NCBP2-207ENST00000452404 CEP170Q5SW79 1584 aa34.83■■■■□ 3.17
NCBP2-207ENST00000452404 IGF1RP08069 1367 aa34.74■■■■□ 3.15
NCBP2-207ENST00000452404 CUL7Q14999 1698 aa34.62■■■■□ 3.13
NCBP2-207ENST00000452404 ERCC6L2Q5T890 1561 aa34.6■■■■□ 3.13
NCBP2-207ENST00000452404 SHROOM2Q13796 1616 aa34.59■■■■□ 3.13
NCBP2-207ENST00000452404 CARMIL1Q5VZK9 1371 aa34.53■■■■□ 3.12
NCBP2-207ENST00000452404 RUSC2Q8N2Y8 1516 aa34.53■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms