Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 CAP1YKL007W 807 nt2□□□□□ -2.09
TDA11P38854 VPS51YKR020W 495 nt2□□□□□ -2.09
TDA11P38854 VPS63YLR261C 327 nt2□□□□□ -2.09
TDA11P38854 YLR307C-AYLR307C-A 264 nt2□□□□□ -2.09
TDA11P38854 SFM1YOR021C 642 nt2□□□□□ -2.09
TDA11P38854 VID24YBR105C 1089 nt2□□□□□ -2.09
TDA11P38854 CDC37YDR168W 1521 nt2□□□□□ -2.09
TDA11P38854 RGA1YOR127W 3024 nt1.99□□□□□ -2.09
TDA11P38854 USO1YDL058W 5373 nt1.99□□□□□ -2.09
TDA11P38854 KAP123YER110C 3342 nt1.99□□□□□ -2.09
TDA11P38854 UBC12YLR306W 567 nt1.99□□□□□ -2.09
TDA11P38854 RPS16AYMR143W 432 nt1.99□□□□□ -2.09
TDA11P38854 YBR197CYBR197C 654 nt1.99□□□□□ -2.09
TDA11P38854 MET18YIL128W 3099 nt1.99□□□□□ -2.09
TDA11P38854 GDI1YER136W 1356 nt1.98□□□□□ -2.09
TDA11P38854 YPT6YLR262C 648 nt1.98□□□□□ -2.09
TDA11P38854 ATX2YOR079C 942 nt1.98□□□□□ -2.09
TDA11P38854 15S_rRNA15S_rRNA 1649 nt1.98□□□□□ -2.09
TDA11P38854 KSP1YHR082C 3090 nt1.97□□□□□ -2.09
TDA11P38854 YNL034WYNL034W 1839 nt1.97□□□□□ -2.09
TDA11P38854 YDR248CYDR248C 582 nt1.97□□□□□ -2.09
TDA11P38854 YJL047C-AYJL047C-A 135 nt1.97□□□□□ -2.09
TDA11P38854 YJL133C-AYJL133C-A 225 nt1.97□□□□□ -2.09
TDA11P38854 VTI1YMR197C 654 nt1.97□□□□□ -2.09
TDA11P38854 IGO1YNL157W 507 nt1.97□□□□□ -2.09
TDA11P38854 YNL179CYNL179C 438 nt1.97□□□□□ -2.09
TDA11P38854 YNL226WYNL226W 411 nt1.97□□□□□ -2.09
TDA11P38854 SAP190YKR028W 3102 nt1.97□□□□□ -2.09
TDA11P38854 SSE1YPL106C 2082 nt1.97□□□□□ -2.09
TDA11P38854 SSF2YDR312W 1362 nt1.97□□□□□ -2.09
TDA11P38854 SNU114YKL173W 3027 nt1.96□□□□□ -2.1
TDA11P38854 ECM25YJL201W 1800 nt1.96□□□□□ -2.1
TDA11P38854 INO80YGL150C 4470 nt1.96□□□□□ -2.1
TDA11P38854 FKS1YLR342W 5631 nt1.96□□□□□ -2.1
TDA11P38854 NUP120YKL057C 3114 nt1.96□□□□□ -2.1
TDA11P38854 TUS1YLR425W 3924 nt1.96□□□□□ -2.1
TDA11P38854 GCN4YEL009C 846 nt1.96□□□□□ -2.1
TDA11P38854 GIM3YNL153C 390 nt1.96□□□□□ -2.1
TDA11P38854 IPP1YBR011C 864 nt1.96□□□□□ -2.1
TDA11P38854 POP7YBR167C 423 nt1.96□□□□□ -2.1
TDA11P38854 SET2YJL168C 2202 nt1.96□□□□□ -2.1
TDA11P38854 UTP22YGR090W 3714 nt1.96□□□□□ -2.1
TDA11P38854 SSY1YDR160W 2559 nt1.96□□□□□ -2.1
TDA11P38854 NEO1YIL048W 3456 nt1.96□□□□□ -2.1
TDA11P38854 BRP1YGL007W 378 nt1.95□□□□□ -2.1
TDA11P38854 TAD1YGL243W 1203 nt1.95□□□□□ -2.1
TDA11P38854 LIN1YHR156C 1023 nt1.95□□□□□ -2.1
TDA11P38854 YLR224WYLR224W 1110 nt1.95□□□□□ -2.1
TDA11P38854 YLR255CYLR255C 354 nt1.95□□□□□ -2.1
TDA11P38854 SLM4YBR077C 489 nt1.95□□□□□ -2.1
TDA11P38854 MUD1YBR119W 897 nt1.95□□□□□ -2.1
TDA11P38854 LRE1YCL051W 1752 nt1.95□□□□□ -2.1
TDA11P38854 MES1YGR264C 2256 nt1.94□□□□□ -2.1
TDA11P38854 NAN1YPL126W 2691 nt1.94□□□□□ -2.1
TDA11P38854 KOG1YHR186C 4674 nt1.94□□□□□ -2.1
TDA11P38854 DAD1YDR016C 285 nt1.94□□□□□ -2.1
TDA11P38854 YGL042CYGL042C 306 nt1.94□□□□□ -2.1
TDA11P38854 EMP24YGL200C 612 nt1.94□□□□□ -2.1
TDA11P38854 BMT5YIL096C 1011 nt1.94□□□□□ -2.1
TDA11P38854 SHE2YKL130C 741 nt1.94□□□□□ -2.1
TDA11P38854 YLR366WYLR366W 306 nt1.94□□□□□ -2.1
TDA11P38854 NSL1YPL233W 651 nt1.94□□□□□ -2.1
TDA11P38854 RTT107YHR154W 3213 nt1.94□□□□□ -2.1
TDA11P38854 ALK2YBL009W 2031 nt1.93□□□□□ -2.1
TDA11P38854 REV1YOR346W 2958 nt1.93□□□□□ -2.1
TDA11P38854 BUD2YKL092C 3315 nt1.93□□□□□ -2.1
TDA11P38854 TOR1YJR066W 7413 nt1.93□□□□□ -2.1
TDA11P38854 AIM19YIL087C 474 nt1.93□□□□□ -2.1
TDA11P38854 SDL1YIL167W 633 nt1.93□□□□□ -2.1
TDA11P38854 YIR020C-BYIR020C-B 735 nt1.93□□□□□ -2.1
TDA11P38854 IST2YBR086C 2841 nt1.92□□□□□ -2.1
TDA11P38854 PES4YFR023W 1836 nt1.92□□□□□ -2.1
TDA11P38854 snR59snR59 78 nt1.92□□□□□ -2.1
TDA11P38854 YDL163WYDL163W 303 nt1.92□□□□□ -2.1
TDA11P38854 YDR537CYDR537C 606 nt1.92□□□□□ -2.1
TDA11P38854 PRS3YHL011C 963 nt1.92□□□□□ -2.1
TDA11P38854 YLR379WYLR379W 375 nt1.92□□□□□ -2.1
TDA11P38854 YOL150CYOL150C 312 nt1.92□□□□□ -2.1
TDA11P38854 RUD3YOR216C 1455 nt1.92□□□□□ -2.1
TDA11P38854 STD1YOR047C 1335 nt1.91□□□□□ -2.1
TDA11P38854 BAS1YKR099W 2436 nt1.91□□□□□ -2.1
TDA11P38854 AGC1YPR021C 2709 nt1.91□□□□□ -2.1
TDA11P38854 RPL40AYIL148W 387 nt1.91□□□□□ -2.1
TDA11P38854 YMR144WYMR144W 1029 nt1.91□□□□□ -2.1
TDA11P38854 YNL235CYNL235C 432 nt1.91□□□□□ -2.1
TDA11P38854 ARL3YPL051W 597 nt1.91□□□□□ -2.1
TDA11P38854 GRX5YPL059W 453 nt1.91□□□□□ -2.1
TDA11P38854 PUT3YKL015W 2940 nt1.91□□□□□ -2.1
TDA11P38854 Q0255Q0255 1419 nt1.91□□□□□ -2.1
TDA11P38854 MSL5YLR116W 1431 nt1.91□□□□□ -2.1
TDA11P38854 RRP6YOR001W 2202 nt1.9□□□□□ -2.1
TDA11P38854 IPT1YDR072C 1584 nt1.9□□□□□ -2.1
TDA11P38854 PBP4YDL053C 558 nt1.9□□□□□ -2.11
TDA11P38854 IRC2YDR112W 309 nt1.9□□□□□ -2.11
TDA11P38854 YDR115WYDR115W 318 nt1.9□□□□□ -2.11
TDA11P38854 GPI8YDR331W 1236 nt1.9□□□□□ -2.11
TDA11P38854 RSM18YER050C 417 nt1.9□□□□□ -2.11
TDA11P38854 YFR056CYFR056C 369 nt1.9□□□□□ -2.11
TDA11P38854 YGL109WYGL109W 324 nt1.9□□□□□ -2.11
TDA11P38854 YIP1YGR172C 747 nt1.9□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 24.6 ms