Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.12■□□□□ 0.81
ITM2AO43736 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ITM2AO43736 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
ITM2AO43736 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ITM2AO43736 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.11■□□□□ 0.81
ITM2AO43736 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ITM2AO43736 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
ITM2AO43736 AC125437.2-201ENST00000625180 2167 ntBASIC20.11■□□□□ 0.81
ITM2AO43736 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ITM2AO43736 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.11■□□□□ 0.81
ITM2AO43736 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.11■□□□□ 0.81
ITM2AO43736 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
ITM2AO43736 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.11■□□□□ 0.81
ITM2AO43736 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
ITM2AO43736 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ITM2AO43736 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
ITM2AO43736 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ITM2AO43736 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.11■□□□□ 0.81
ITM2AO43736 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ITM2AO43736 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ITM2AO43736 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ITM2AO43736 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ITM2AO43736 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ITM2AO43736 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.1■□□□□ 0.81
ITM2AO43736 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ITM2AO43736 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ITM2AO43736 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ITM2AO43736 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.1■□□□□ 0.81
ITM2AO43736 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.1■□□□□ 0.81
ITM2AO43736 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.1■□□□□ 0.81
ITM2AO43736 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ITM2AO43736 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.1■□□□□ 0.81
ITM2AO43736 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ITM2AO43736 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ITM2AO43736 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.1■□□□□ 0.81
ITM2AO43736 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ITM2AO43736 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ITM2AO43736 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ITM2AO43736 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITM2AO43736 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITM2AO43736 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITM2AO43736 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ITM2AO43736 AC135279.3-201ENST00000610945 1311 ntBASIC20.09■□□□□ 0.81
ITM2AO43736 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.09■□□□□ 0.81
ITM2AO43736 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ITM2AO43736 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITM2AO43736 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.09■□□□□ 0.81
ITM2AO43736 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITM2AO43736 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.09■□□□□ 0.81
ITM2AO43736 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ITM2AO43736 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITM2AO43736 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.09■□□□□ 0.81
ITM2AO43736 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITM2AO43736 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
ITM2AO43736 AC116562.4-201ENST00000641316 2276 ntBASIC20.09■□□□□ 0.81
ITM2AO43736 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITM2AO43736 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITM2AO43736 SMG8-203ENST00000578922 2178 ntBASIC20.08■□□□□ 0.81
ITM2AO43736 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
ITM2AO43736 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ITM2AO43736 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ITM2AO43736 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ITM2AO43736 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.08■□□□□ 0.81
ITM2AO43736 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ITM2AO43736 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.08■□□□□ 0.81
ITM2AO43736 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ITM2AO43736 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ITM2AO43736 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ITM2AO43736 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ITM2AO43736 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.08■□□□□ 0.81
ITM2AO43736 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ITM2AO43736 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.08■□□□□ 0.8
ITM2AO43736 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ITM2AO43736 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
ITM2AO43736 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ITM2AO43736 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ITM2AO43736 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ITM2AO43736 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.08■□□□□ 0.8
ITM2AO43736 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITM2AO43736 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.07■□□□□ 0.8
ITM2AO43736 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.07■□□□□ 0.8
ITM2AO43736 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ITM2AO43736 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITM2AO43736 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ITM2AO43736 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.07■□□□□ 0.8
ITM2AO43736 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITM2AO43736 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.07■□□□□ 0.8
ITM2AO43736 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.07■□□□□ 0.8
ITM2AO43736 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.07■□□□□ 0.8
ITM2AO43736 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITM2AO43736 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ITM2AO43736 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.07■□□□□ 0.8
ITM2AO43736 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.07■□□□□ 0.8
ITM2AO43736 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.07■□□□□ 0.8
ITM2AO43736 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.07■□□□□ 0.8
ITM2AO43736 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITM2AO43736 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ITM2AO43736 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITM2AO43736 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ITM2AO43736 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms