Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 PARD3B-202ENST00000351153 3411 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.86e-6■■■■□ 22.2
EXOSC5Q9NQT4 PARD3B-201ENST00000349953 3315 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.816e-6■■■■□ 22.2
EXOSC5Q9NQT4 P4HA2-206ENST00000395164 568 ntTSL 49.98□□□□□ -0.816e-6■■■■□ 22.2
EXOSC5Q9NQT4 XPO6-205ENST00000564337 605 ntTSL 59.96□□□□□ -0.826e-6■■■■□ 22.2
EXOSC5Q9NQT4 XPO6-208ENST00000565698 4255 ntTSL 2 BASIC9.81□□□□□ -0.846e-6■■■■□ 22.2
EXOSC5Q9NQT4 STAU1-202ENST00000347458 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.856e-6■■■■□ 22.2
EXOSC5Q9NQT4 STAU1-204ENST00000371792 3130 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.856e-6■■■■□ 22.2
EXOSC5Q9NQT4 TRAPPC12-212ENST00000457845 579 ntTSL 49.67□□□□□ -0.866e-6■■■■□ 22.2
EXOSC5Q9NQT4 PARD3B-203ENST00000358768 3432 ntTSL 1 (best) BASIC9.52□□□□□ -0.896e-6■■■■□ 22.2
EXOSC5Q9NQT4 AP1S3-201ENST00000334271 2201 ntTSL 29.48□□□□□ -0.896e-6■■■■□ 22.2
EXOSC5Q9NQT4 EP400-207ENST00000611739 4314 ntTSL 1 (best)9.37□□□□□ -0.916e-6■■■■□ 22.2
EXOSC5Q9NQT4 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.916e-6■■■■□ 22.2
EXOSC5Q9NQT4 CCNY-210ENST00000497692 478 ntTSL 29.35□□□□□ -0.916e-6■■■■□ 22.2
EXOSC5Q9NQT4 STAU1-205ENST00000371802 3154 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.936e-6■■■■□ 22.2
EXOSC5Q9NQT4 XPO6-204ENST00000563138 562 ntTSL 29.25□□□□□ -0.936e-6■■■■□ 22.2
EXOSC5Q9NQT4 STAU1-201ENST00000340954 3334 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.956e-6■■■■□ 22.2
EXOSC5Q9NQT4 STAU1-207ENST00000371856 3684 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.966e-6■■■■□ 22.2
EXOSC5Q9NQT4 STAU1-206ENST00000371828 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -16e-6■■■■□ 22.2
EXOSC5Q9NQT4 HMBOX1-201ENST00000287701 3184 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.026e-6■■■■□ 22.2
EXOSC5Q9NQT4 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.026e-6■■■■□ 22.2
EXOSC5Q9NQT4 HMBOX1-205ENST00000518080 559 ntTSL 48.52□□□□□ -1.056e-6■■■■□ 22.2
EXOSC5Q9NQT4 XPO6-212ENST00000567842 588 ntTSL 58.28□□□□□ -1.086e-6■■■■□ 22.2
EXOSC5Q9NQT4 TRAPPC12-215ENST00000469147 1002 ntTSL 37.84□□□□□ -1.156e-6■■■■□ 22.2
EXOSC5Q9NQT4 SH3BGRL-204ENST00000481106 928 ntTSL 1 (best)7.58□□□□□ -1.26e-6■■■■□ 22.2
EXOSC5Q9NQT4 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.226e-6■■■■□ 22.2
EXOSC5Q9NQT4 CCNY-205ENST00000465416 432 ntTSL 57.4□□□□□ -1.226e-6■■■■□ 22.2
EXOSC5Q9NQT4 SH3BGRL-202ENST00000463546 755 ntTSL 27.26□□□□□ -1.256e-6■■■■□ 22.2
EXOSC5Q9NQT4 HMBOX1-208ENST00000521516 2216 ntTSL 26.92□□□□□ -1.36e-6■■■■□ 22.2
EXOSC5Q9NQT4 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.71□□□□□ -1.346e-6■■■■□ 22.2
EXOSC5Q9NQT4 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.386e-6■■■■□ 22.2
EXOSC5Q9NQT4 DMD-226ENST00000488902 771 ntTSL 26.12□□□□□ -1.436e-6■■■■□ 22.2
EXOSC5Q9NQT4 MBD5-232ENST00000638090 2039 ntTSL 55.92□□□□□ -1.466e-6■■■■□ 22.2
EXOSC5Q9NQT4 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.73□□□□□ -1.496e-6■■■■□ 22.2
EXOSC5Q9NQT4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.21□□□□□ -1.586e-6■■■■□ 22.2
EXOSC5Q9NQT4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.626e-6■■■■□ 22.2
EXOSC5Q9NQT4 SDHAF3-203ENST00000479853 774 ntTSL 24.79□□□□□ -1.646e-6■■■■□ 22.2
EXOSC5Q9NQT4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.48□□□□□ -1.696e-6■■■■□ 22.2
EXOSC5Q9NQT4 NNT-203ENST00000503059 634 ntTSL 34.43□□□□□ -1.76e-6■■■■□ 22.2
EXOSC5Q9NQT4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.716e-6■■■■□ 22.2
EXOSC5Q9NQT4 DMD-224ENST00000480751 234 ntTSL 1 (best)4.18□□□□□ -1.746e-6■■■■□ 22.2
EXOSC5Q9NQT4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.756e-6■■■■□ 22.2
EXOSC5Q9NQT4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.766e-6■■■■□ 22.2
EXOSC5Q9NQT4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.776e-6■■■■□ 22.2
EXOSC5Q9NQT4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.786e-6■■■■□ 22.2
EXOSC5Q9NQT4 WAC-214ENST00000476046 523 ntTSL 23.77□□□□□ -1.816e-6■■■■□ 22.2
EXOSC5Q9NQT4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.76□□□□□ -1.816e-6■■■■□ 22.2
EXOSC5Q9NQT4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.66□□□□□ -1.826e-6■■■■□ 22.2
EXOSC5Q9NQT4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.846e-6■■■■□ 22.2
EXOSC5Q9NQT4 MBD5-208ENST00000478804 592 ntTSL 53.45□□□□□ -1.866e-6■■■■□ 22.2
EXOSC5Q9NQT4 MBD5-210ENST00000496158 544 ntTSL 53.4□□□□□ -1.876e-6■■■■□ 22.2
EXOSC5Q9NQT4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.26□□□□□ -1.896e-6■■■■□ 22.2
EXOSC5Q9NQT4 DMD-215ENST00000447523 375 ntTSL 1 (best)3.24□□□□□ -1.896e-6■■■■□ 22.2
EXOSC5Q9NQT4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.12□□□□□ -1.916e-6■■■■□ 22.2
EXOSC5Q9NQT4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.946e-6■■■■□ 22.2
EXOSC5Q9NQT4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.956e-6■■■■□ 22.2
EXOSC5Q9NQT4 DMD-216ENST00000448370 123 ntTSL 52.84□□□□□ -1.956e-6■■■■□ 22.2
EXOSC5Q9NQT4 MBD5-209ENST00000488372 548 ntTSL 42.65□□□□□ -1.996e-6■■■■□ 22.2
EXOSC5Q9NQT4 DMD-213ENST00000420596 303 ntTSL 52.42□□□□□ -2.026e-6■■■■□ 22.2
EXOSC5Q9NQT4 MBD5-218ENST00000636620 475 ntTSL 51.88□□□□□ -2.116e-6■■■■□ 22.2
EXOSC5Q9NQT4 MBD5-219ENST00000636948 100 ntTSL 50.89□□□□□ -2.276e-6■■■■□ 22.2
EXOSC5Q9NQT4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.91□□□□□ -0.189e-7■■■■□ 22.1
EXOSC5Q9NQT4 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.899e-7■■■■□ 22.1
EXOSC5Q9NQT4 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC8.16□□□□□ -1.19e-7■■■■□ 22.1
EXOSC5Q9NQT4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.072e-6■■■■□ 22.1
EXOSC5Q9NQT4 LINC00470-208ENST00000582570 607 ntTSL 34.06□□□□□ -1.762e-6■■■■□ 22.1
EXOSC5Q9NQT4 LINC00470-205ENST00000580336 408 ntTSL 23.4□□□□□ -1.872e-6■■■■□ 22.1
EXOSC5Q9NQT4 LINC-PINT-202ENST00000423414 616 ntTSL 418.02■□□□□ 0.489e-9■■■■□ 22.1
EXOSC5Q9NQT4 LINC-PINT-204ENST00000431189 803 ntTSL 317.17■□□□□ 0.349e-9■■■■□ 22.1
EXOSC5Q9NQT4 GMDS-AS1-209ENST00000532124 629 ntTSL 416.1■□□□□ 0.174e-6■■■■□ 22.1
EXOSC5Q9NQT4 GMDS-AS1-203ENST00000524770 565 ntTSL 316.1■□□□□ 0.174e-6■■■■□ 22.1
EXOSC5Q9NQT4 LINC-PINT-203ENST00000429901 565 ntTSL 416.07■□□□□ 0.169e-9■■■■□ 22.1
EXOSC5Q9NQT4 LINC-PINT-205ENST00000433079 1262 ntTSL 1 (best)15.37■□□□□ 0.059e-9■■■■□ 22.1
EXOSC5Q9NQT4 GMDS-AS1-206ENST00000530346 594 ntTSL 414.32□□□□□ -0.124e-6■■■■□ 22.1
EXOSC5Q9NQT4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.07□□□□□ -0.324e-6■■■■□ 22.1
EXOSC5Q9NQT4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.53□□□□□ -0.44e-6■■■■□ 22.1
EXOSC5Q9NQT4 TBC1D8-204ENST00000463469 561 ntTSL 412.17□□□□□ -0.464e-6■■■■□ 22.1
EXOSC5Q9NQT4 GMDS-AS1-208ENST00000531092 744 ntTSL 311.21□□□□□ -0.614e-6■■■■□ 22.1
EXOSC5Q9NQT4 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.674e-6■■■■□ 22.1
EXOSC5Q9NQT4 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC10.77□□□□□ -0.699e-9■■■■□ 22.1
EXOSC5Q9NQT4 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.769e-7■■■■□ 22.1
EXOSC5Q9NQT4 GMDS-AS1-214ENST00000534468 724 ntTSL 39.98□□□□□ -0.814e-6■■■■□ 22.1
EXOSC5Q9NQT4 GMDS-AS1-213ENST00000534441 738 ntTSL 3 BASIC9.11□□□□□ -0.954e-6■■■■□ 22.1
EXOSC5Q9NQT4 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.87□□□□□ -1.314e-6■■■■□ 22.1
EXOSC5Q9NQT4 HUWE1-205ENST00000446750 872 ntTSL 517.66■□□□□ 0.422e-6■■■■□ 22.1
EXOSC5Q9NQT4 HUWE1-201ENST00000218328 5488 ntTSL 516.44■□□□□ 0.222e-6■■■■□ 22.1
EXOSC5Q9NQT4 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.862e-6■■■■□ 22.1
EXOSC5Q9NQT4 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.352e-6■■■■□ 22.1
EXOSC5Q9NQT4 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.421e-6■■■■□ 22
EXOSC5Q9NQT4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.521e-6■■■■□ 22
EXOSC5Q9NQT4 SYCP2L-202ENST00000341041 3069 ntTSL 210.35□□□□□ -0.751e-6■■■■□ 22
EXOSC5Q9NQT4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.561e-6■■■■□ 22
EXOSC5Q9NQT4 SYCP2L-205ENST00000487561 644 ntTSL 34.68□□□□□ -1.661e-6■■■■□ 22
EXOSC5Q9NQT4 ARIH1-209ENST00000567762 319 ntTSL 33.33□□□□□ -1.882e-6■■■■□ 22
EXOSC5Q9NQT4 AC245060.4-201ENST00000413293 1121 ntBASIC4.55□□□□□ -1.681e-6■■■■□ 22
EXOSC5Q9NQT4 ZNF148-204ENST00000471196 566 ntTSL 415.88■□□□□ 0.132e-6■■■■□ 22
EXOSC5Q9NQT4 ZNF148-208ENST00000495019 763 ntTSL 514.76□□□□□ -0.052e-6■■■■□ 22
EXOSC5Q9NQT4 ZNF148-202ENST00000465763 566 ntTSL 47.56□□□□□ -1.22e-6■■■■□ 22
EXOSC5Q9NQT4 PHKB-207ENST00000566037 1032 ntTSL 218.12■□□□□ 0.491e-6■■■■□ 22
EXOSC5Q9NQT4 PHKB-206ENST00000565424 828 ntTSL 35.21□□□□□ -1.581e-6■■■■□ 22
EXOSC5Q9NQT4 SMAP2-202ENST00000372718 2939 ntAPPRIS P1 TSL 1 (best)15.5■□□□□ 0.072e-7■■■■□ 21.9
Retrieved 100 of 8,799 protein–RNA pairs in 338.6 ms