RNA–Protein interactions for RNA: ENST00000582570.1

LINC00470-208, long intergenic non-protein coding RNA 470, human

TSL 3

Gene LINC00470, Length 607 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00470-208	ENST00000582570	AEBP2	Q6ZN18	517 aa	Predicted RBP	21.62	■■□□□ 1.05
LINC00470-208	ENST00000582570	CHIC1	Q5VXU3	224 aa		21.09	■□□□□ 0.97
LINC00470-208	ENST00000582570	SENP3	Q9H4L4	574 aa	Predicted RBP	18.68	■□□□□ 0.58
LINC00470-208	ENST00000582570	PHF23	Q9BUL5	403 aa	Predicted RBP	18.36	■□□□□ 0.53
LINC00470-208	ENST00000582570	FOXD1	Q16676	465 aa		17.17	■□□□□ 0.34
LINC00470-208	ENST00000582570	PLPPR3	Q6T4P5	718 aa		17.16	■□□□□ 0.34
LINC00470-208	ENST00000582570	ADRA2B	P18089	450 aa		16.3	■□□□□ 0.2
LINC00470-208	ENST00000582570	PIAS4	Q8N2W9	510 aa	Predicted RBP	16.27	■□□□□ 0.2
LINC00470-208	ENST00000582570	PPP6R1	Q9UPN7	881 aa		16.25	■□□□□ 0.19
LINC00470-208	ENST00000582570	MSH5	O43196	834 aa		16.15	■□□□□ 0.18
LINC00470-208	ENST00000582570	SCAF1	Q9H7N4	1312 aa	Known RBP	15.25	■□□□□ 0.03
LINC00470-208	ENST00000582570	PPP4R3CP	Q6ZMV5	832 aa		15	□□□□□ -0.01
LINC00470-208	ENST00000582570	POTED	Q86YR6	584 aa		14.88	□□□□□ -0.03
LINC00470-208	ENST00000582570	MAPK8IP2	Q13387	824 aa	Predicted RBP	14.8	□□□□□ -0.04
LINC00470-208	ENST00000582570	DMRT2	Q9Y5R5	561 aa		14.79	□□□□□ -0.04
LINC00470-208	ENST00000582570	NCBP3	Q53F19	620 aa	Known RBP	14.75	□□□□□ -0.05
LINC00470-208	ENST00000582570	CNKSR2	Q8WXI2	1034 aa		14.7	□□□□□ -0.06
LINC00470-208	ENST00000582570	RNF216	Q9NWF9	866 aa	Predicted RBP	14.45	□□□□□ -0.1
LINC00470-208	ENST00000582570	HOXD11	P31277	338 aa	Predicted RBP	14.39	□□□□□ -0.11
LINC00470-208	ENST00000582570	KCNA4	P22459	653 aa		14.32	□□□□□ -0.12
LINC00470-208	ENST00000582570	NPM3	O75607	178 aa	Known RBP	14.28	□□□□□ -0.12
LINC00470-208	ENST00000582570	DCAF8L1	A6NGE4	600 aa		14.27	□□□□□ -0.13
LINC00470-208	ENST00000582570	DNAJC5B	Q9UF47	199 aa		13.96	□□□□□ -0.17
LINC00470-208	ENST00000582570	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
LINC00470-208	ENST00000582570	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.74	□□□□□ -0.21
LINC00470-208	ENST00000582570	RNF39	Q9H2S5	420 aa		13.67	□□□□□ -0.22
LINC00470-208	ENST00000582570	C1QBP	Q07021	282 aa	Known RBP	13.62	□□□□□ -0.23
LINC00470-208	ENST00000582570	CACNB1	Q02641	598 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC00470-208	ENST00000582570	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.48	□□□□□ -0.25
LINC00470-208	ENST00000582570	APLP2	Q06481	763 aa		13.48	□□□□□ -0.25
LINC00470-208	ENST00000582570	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.48	□□□□□ -0.25
LINC00470-208	ENST00000582570	SLC4A2	P04920	1241 aa		13.46	□□□□□ -0.25
LINC00470-208	ENST00000582570		U3KPZ7	1027 aa	Predicted RBP	13.42	□□□□□ -0.26
LINC00470-208	ENST00000582570	FOXD4L1	Q9NU39	408 aa		13.39	□□□□□ -0.27
LINC00470-208	ENST00000582570	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.35	□□□□□ -0.27
LINC00470-208	ENST00000582570	MYCN	P04198	464 aa	Predicted RBP	13.34	□□□□□ -0.27
LINC00470-208	ENST00000582570	CAPN15	O75808	1086 aa		13.21	□□□□□ -0.29
LINC00470-208	ENST00000582570	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.16	□□□□□ -0.3
LINC00470-208	ENST00000582570	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.07	□□□□□ -0.32
LINC00470-208	ENST00000582570	ZBTB22	O15209	634 aa		13.06	□□□□□ -0.32
LINC00470-208	ENST00000582570	TRH	P20396	242 aa	Predicted RBP	13.06	□□□□□ -0.32
LINC00470-208	ENST00000582570	EHMT2	Q96KQ7	1210 aa		13.04	□□□□□ -0.32
LINC00470-208	ENST00000582570	ATXN8OS	P0DMR3	200 aa		13	□□□□□ -0.33
LINC00470-208	ENST00000582570	DSG3	P32926	999 aa		12.91	□□□□□ -0.34
LINC00470-208	ENST00000582570	CSRNP3	Q8WYN3	585 aa		12.89	□□□□□ -0.35
LINC00470-208	ENST00000582570	ABCB7	O75027	752 aa		12.83	□□□□□ -0.36
LINC00470-208	ENST00000582570	POLA2	Q14181	598 aa		12.77	□□□□□ -0.37
LINC00470-208	ENST00000582570	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.76	□□□□□ -0.37
LINC00470-208	ENST00000582570	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.74	□□□□□ -0.37
LINC00470-208	ENST00000582570	FBLN2	P98095	1184 aa		12.58	□□□□□ -0.4
LINC00470-208	ENST00000582570	RBM42	Q9BTD8	480 aa	Known RBP	12.55	□□□□□ -0.4
LINC00470-208	ENST00000582570	OSCAR	Q8IYS5	282 aa		12.32	□□□□□ -0.44
LINC00470-208	ENST00000582570	SPDYE2B	A6NHP3	402 aa		12.28	□□□□□ -0.44
LINC00470-208	ENST00000582570	SPDYE6	P0CI01	402 aa		12.28	□□□□□ -0.44
LINC00470-208	ENST00000582570	SPDYE2	Q495Y8	402 aa		12.28	□□□□□ -0.44
LINC00470-208	ENST00000582570	AKT1S1	Q96B36	256 aa		12.25	□□□□□ -0.45
LINC00470-208	ENST00000582570	MKRN4P	Q13434	485 aa	Predicted RBP	12.21	□□□□□ -0.45
LINC00470-208	ENST00000582570	ZNF692	Q9BU19	519 aa	Predicted RBP	12.18	□□□□□ -0.46
LINC00470-208	ENST00000582570	SSUH2	Q9Y2M2	353 aa		12.05	□□□□□ -0.48
LINC00470-208	ENST00000582570	REM2	Q8IYK8	340 aa	Predicted RBP	12.04	□□□□□ -0.48
LINC00470-208	ENST00000582570	SPDYE4	A6NLX3	237 aa		12.02	□□□□□ -0.49
LINC00470-208	ENST00000582570	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12	□□□□□ -0.49
LINC00470-208	ENST00000582570	CHRDL2	Q6WN34	429 aa		11.97	□□□□□ -0.49
LINC00470-208	ENST00000582570	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
LINC00470-208	ENST00000582570	CLEC11A	Q9Y240	323 aa		11.91	□□□□□ -0.5
LINC00470-208	ENST00000582570	PITPNM1	O00562	1244 aa		11.89	□□□□□ -0.51
LINC00470-208	ENST00000582570	STAG3	Q9UJ98	1225 aa		11.89	□□□□□ -0.51
LINC00470-208	ENST00000582570	POTEH	Q6S545	545 aa		11.81	□□□□□ -0.52
LINC00470-208	ENST00000582570	PRR29	P0C7W0	189 aa		11.8	□□□□□ -0.52
LINC00470-208	ENST00000582570	FKBP8	Q14318	412 aa		11.79	□□□□□ -0.52
LINC00470-208	ENST00000582570	FXR2	P51116	673 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
LINC00470-208	ENST00000582570	PIP4P2	Q8N4L2	257 aa		11.7	□□□□□ -0.54
LINC00470-208	ENST00000582570	PROM2	Q8N271	834 aa		11.67	□□□□□ -0.54
LINC00470-208	ENST00000582570	PLEKHG5	O94827	1062 aa		11.65	□□□□□ -0.54
LINC00470-208	ENST00000582570	PRKAR2A	P13861	404 aa	Known RBP	11.65	□□□□□ -0.54
LINC00470-208	ENST00000582570	FBXO3	Q9UK99	471 aa		11.62	□□□□□ -0.55
LINC00470-208	ENST00000582570	HAX1	O00165	279 aa		11.5	□□□□□ -0.57
LINC00470-208	ENST00000582570	CHADL	Q6NUI6	762 aa		11.5	□□□□□ -0.57
LINC00470-208	ENST00000582570	NPM1	P06748	294 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
LINC00470-208	ENST00000582570	PLCD3	Q8N3E9	789 aa		11.48	□□□□□ -0.57
LINC00470-208	ENST00000582570	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.48	□□□□□ -0.57
LINC00470-208	ENST00000582570	MIER1	Q8N108	512 aa		11.47	□□□□□ -0.57
LINC00470-208	ENST00000582570	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.46	□□□□□ -0.57
LINC00470-208	ENST00000582570	CREBZF	Q9NS37	354 aa		11.44	□□□□□ -0.58
LINC00470-208	ENST00000582570	PAK3	O75914	559 aa	Predicted RBP	11.41	□□□□□ -0.58
LINC00470-208	ENST00000582570	C19orf67	A6NJJ6	358 aa		11.33	□□□□□ -0.6
LINC00470-208	ENST00000582570	CD44	P16070	742 aa	Known RBP	11.32	□□□□□ -0.6
LINC00470-208	ENST00000582570	VASP	P50552	380 aa	Predicted RBP	11.31	□□□□□ -0.6
LINC00470-208	ENST00000582570	CLCN6	P51797	869 aa		11.28	□□□□□ -0.6
LINC00470-208	ENST00000582570	KLHL34	Q8N239	644 aa		11.28	□□□□□ -0.6
LINC00470-208	ENST00000582570	SP7	Q8TDD2	431 aa	Predicted RBP	11.28	□□□□□ -0.6
LINC00470-208	ENST00000582570	MNX1	P50219	401 aa	Predicted RBP	11.23	□□□□□ -0.61
LINC00470-208	ENST00000582570	ZRANB1	Q9UGI0	708 aa		11.23	□□□□□ -0.61
LINC00470-208	ENST00000582570	FAM212A	Q96EL1	285 aa		11.18	□□□□□ -0.62
LINC00470-208	ENST00000582570	ZNF579	Q8NAF0	562 aa	Known RBP	11.15	□□□□□ -0.62
LINC00470-208	ENST00000582570	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.14	□□□□□ -0.63
LINC00470-208	ENST00000582570	EVX2	Q03828	476 aa		11.11	□□□□□ -0.63
LINC00470-208	ENST00000582570	SPOCK2	Q92563	424 aa		11.1	□□□□□ -0.63
LINC00470-208	ENST00000582570	GSE1	Q14687	1217 aa		11.09	□□□□□ -0.63
LINC00470-208	ENST00000582570	DCAF8	Q5TAQ9	597 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms